RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 CXCL14O95715 111 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 LINC00614P0C842 121 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 ADRA1AP35348 466 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 BTG2P78543 158 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 FAM189BP81408 668 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 TSEN54Q7Z6J9 526 aaKnown RBP11.47□□□□□ -0.57
COL6A3-203ENST00000353578 H1FOOQ8IZA3 346 aaPredicted RBP11.47□□□□□ -0.57
COL6A3-203ENST00000353578 PSENENQ9NZ42 101 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 CPA4Q9UI42 421 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 SOCS6O14544 535 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 SLC31A1O15431 190 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 OR5AL1P0C617 328 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 PCMT1P22061 227 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 OR5D13Q8NGL4 314 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 TPPP3Q9BW30 176 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 MAGT1Q9H0U3 335 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 ARFGEF1Q9Y6D6 1849 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 LOC107986453A0A1B0GWG9 222 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 TNFSF12O43508 249 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 PRRT3Q5FWE3 981 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 LPAR4Q99677 370 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 TMEM167BQ9NRX6 74 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 SLC45A1Q9Y2W3 748 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 CLEC18AA5D8T8 446 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 GYPBP06028 91 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 POU3F1Q03052 451 aaPredicted RBP11.47□□□□□ -0.57
COL6A3-203ENST00000353578 CLEC18CQ8NCF0 446 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 ATOH1Q92858 354 aaPredicted RBP11.47□□□□□ -0.57
COL6A3-203ENST00000353578 ORAI1Q96D31 301 aa11.47□□□□□ -0.57
COL6A3-203ENST00000353578 SPTA1P02549 2419 aa11.46□□□□□ -0.57
COL6A3-203ENST00000353578 ERHP84090 104 aaKnown RBP11.46□□□□□ -0.57
COL6A3-203ENST00000353578 DHRS7BQ6IAN0 325 aaPredicted RBP11.46□□□□□ -0.57
COL6A3-203ENST00000353578 FZD1Q9UP38 647 aa11.46□□□□□ -0.57
COL6A3-203ENST00000353578 TMED7Q9Y3B3 224 aa11.46□□□□□ -0.57
COL6A3-203ENST00000353578 PLPP7Q8NBV4 271 aa11.46□□□□□ -0.57
COL6A3-203ENST00000353578 HDAC8Q9BY41 377 aa11.46□□□□□ -0.57
COL6A3-203ENST00000353578 PIGLQ9Y2B2 252 aa11.46□□□□□ -0.57
COL6A3-203ENST00000353578 KIAA2026Q5HYC2 2103 aa11.46□□□□□ -0.57
COL6A3-203ENST00000353578 LRRC3CA6NJW4 275 aa11.46□□□□□ -0.57
COL6A3-203ENST00000353578 HPP00738 406 aa11.46□□□□□ -0.57
COL6A3-203ENST00000353578 ADAT1Q9BUB4 502 aaKnown RBP11.46□□□□□ -0.57
COL6A3-203ENST00000353578 ANKRD61A6NGH8 418 aa11.46□□□□□ -0.57
COL6A3-203ENST00000353578 VGLL4Q14135 290 aa11.46□□□□□ -0.57
COL6A3-203ENST00000353578 HLA-DRB5Q30154 266 aa11.46□□□□□ -0.57
COL6A3-203ENST00000353578 CBLN2Q8IUK8 224 aa11.46□□□□□ -0.57
COL6A3-203ENST00000353578 WDTC1Q8N5D0 677 aa11.46□□□□□ -0.57
COL6A3-203ENST00000353578 P2RX4Q99571 388 aa11.46□□□□□ -0.57
COL6A3-203ENST00000353578 GPA33Q99795 319 aa11.46□□□□□ -0.57
COL6A3-203ENST00000353578 Q8IYB0 196 aa11.46□□□□□ -0.58
COL6A3-203ENST00000353578 TRDCB7Z8K6 153 aa11.46□□□□□ -0.58
COL6A3-203ENST00000353578 KLF7O75840 302 aaPredicted RBP11.46□□□□□ -0.58
COL6A3-203ENST00000353578 TMEM201Q5SNT2 666 aa11.46□□□□□ -0.58
COL6A3-203ENST00000353578 ZNF385CQ66K41 422 aaPredicted RBP11.46□□□□□ -0.58
COL6A3-203ENST00000353578 ADAMTS17Q8TE56 1095 aa11.46□□□□□ -0.58
COL6A3-203ENST00000353578 LEFTY1O75610 366 aa11.46□□□□□ -0.58
COL6A3-203ENST00000353578 ACTL6AO96019 429 aa11.46□□□□□ -0.58
COL6A3-203ENST00000353578 DCTDP32321 178 aa11.46□□□□□ -0.58
COL6A3-203ENST00000353578 SNRPNP63162 240 aaKnown RBP11.46□□□□□ -0.58
COL6A3-203ENST00000353578 USP53Q70EK8 1073 aa11.46□□□□□ -0.58
COL6A3-203ENST00000353578 GRASPQ7Z6J2 395 aaPredicted RBP11.46□□□□□ -0.58
COL6A3-203ENST00000353578 OR10G8Q8NGN5 311 aa11.46□□□□□ -0.58
COL6A3-203ENST00000353578 OR11L1Q8NGX0 322 aa11.46□□□□□ -0.58
COL6A3-203ENST00000353578 TMEM262E9PQX1 116 aa11.46□□□□□ -0.58
COL6A3-203ENST00000353578 TAPBPO15533 448 aa11.46□□□□□ -0.58
COL6A3-203ENST00000353578 GGACTQ9BVM4 153 aa11.46□□□□□ -0.58
COL6A3-203ENST00000353578 GEMIN2O14893 280 aaKnown RBP11.45□□□□□ -0.58
COL6A3-203ENST00000353578 OR2J2O76002 312 aa11.45□□□□□ -0.58
COL6A3-203ENST00000353578 CYB5R3P00387 301 aaPredicted RBP11.45□□□□□ -0.58
COL6A3-203ENST00000353578 SLC25A6P12236 298 aa11.45□□□□□ -0.58
COL6A3-203ENST00000353578 TMEM268Q5VZI3 342 aa11.45□□□□□ -0.58
COL6A3-203ENST00000353578 JMJD6Q6NYC1 403 aaPredicted RBP11.45□□□□□ -0.58
COL6A3-203ENST00000353578 STXBP6Q8NFX7 210 aa11.45□□□□□ -0.58
COL6A3-203ENST00000353578 NPIPB9F8W1W9 429 aa11.45□□□□□ -0.58
COL6A3-203ENST00000353578 C1orf105O95561 183 aa11.45□□□□□ -0.58
COL6A3-203ENST00000353578 C8AP07357 584 aa11.45□□□□□ -0.58
COL6A3-203ENST00000353578 TGFBR1P36897 503 aa11.45□□□□□ -0.58
COL6A3-203ENST00000353578 TRAT1Q6PIZ9 186 aa11.45□□□□□ -0.58
COL6A3-203ENST00000353578 RTL8AQ9BWD3 113 aa11.45□□□□□ -0.58
COL6A3-203ENST00000353578 PECRQ9BY49 303 aa11.45□□□□□ -0.58
COL6A3-203ENST00000353578 AAMDCQ9H7C9 122 aa11.45□□□□□ -0.58
COL6A3-203ENST00000353578 ZNF646O15015 1829 aaPredicted RBP11.45□□□□□ -0.58
COL6A3-203ENST00000353578 MUC20Q8N307 709 aaPredicted RBP11.45□□□□□ -0.58
COL6A3-203ENST00000353578 NWD2Q9ULI1 1742 aa11.45□□□□□ -0.58
COL6A3-203ENST00000353578 YIPF1Q9Y548 306 aa11.45□□□□□ -0.58
COL6A3-203ENST00000353578 R4GMQ9 66 aa11.45□□□□□ -0.58
COL6A3-203ENST00000353578 COL14A1Q05707 1796 aaKnown RBP11.45□□□□□ -0.58
COL6A3-203ENST00000353578 FAM87AP0C7U9 286 aa11.45□□□□□ -0.58
COL6A3-203ENST00000353578 FAM169BQ8N8A8 192 aa11.45□□□□□ -0.58
COL6A3-203ENST00000353578 OPN3Q9H1Y3 402 aaPredicted RBP11.45□□□□□ -0.58
COL6A3-203ENST00000353578 LYRM4Q9HD34 91 aa11.45□□□□□ -0.58
COL6A3-203ENST00000353578 PRAMEF4O60810 478 aa11.45□□□□□ -0.58
COL6A3-203ENST00000353578 DUSP5Q16690 384 aa11.45□□□□□ -0.58
COL6A3-203ENST00000353578 MS4A3Q96HJ5 214 aa11.45□□□□□ -0.58
COL6A3-203ENST00000353578 BCORQ6W2J9 1755 aa11.45□□□□□ -0.58
COL6A3-203ENST00000353578 ATF1P18846 271 aa11.45□□□□□ -0.58
COL6A3-203ENST00000353578 HTR1DP28221 377 aa11.45□□□□□ -0.58
COL6A3-203ENST00000353578 PAM16Q9Y3D7 125 aa11.45□□□□□ -0.58
COL6A3-203ENST00000353578 ALS2Q96Q42 1657 aa11.45□□□□□ -0.58
COL6A3-203ENST00000353578 SAMD13Q5VXD3 122 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms