RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 NKX3-1Q99801 234 aaPredicted RBP6.05□□□□□ -1.44
TRIM55-203ENST00000350034 OR2H1Q9GZK4 316 aa6.05□□□□□ -1.44
TRIM55-203ENST00000350034 GHITMQ9H3K2 345 aa6.05□□□□□ -1.44
TRIM55-203ENST00000350034 EXO5Q9H790 373 aa6.05□□□□□ -1.44
TRIM55-203ENST00000350034 SCPEP1Q9HB40 452 aa6.05□□□□□ -1.44
TRIM55-203ENST00000350034 GP6Q9HCN6 339 aa6.05□□□□□ -1.44
TRIM55-203ENST00000350034 SLC7A10Q9NS82 523 aa6.05□□□□□ -1.44
TRIM55-203ENST00000350034 SPRR3Q9UBC9 169 aa6.05□□□□□ -1.44
TRIM55-203ENST00000350034 ATPIF1Q9UII2 106 aa6.05□□□□□ -1.44
TRIM55-203ENST00000350034 ZNF107Q9UII5 783 aaPredicted RBP6.05□□□□□ -1.44
TRIM55-203ENST00000350034 MCTS1Q9ULC4 181 aaKnown RBP6.05□□□□□ -1.44
TRIM55-203ENST00000350034 TRGV5A0A0B4J1U4 118 aa6.04□□□□□ -1.44
TRIM55-203ENST00000350034 ZNF891A8MT65 544 aaPredicted RBP6.04□□□□□ -1.44
TRIM55-203ENST00000350034 F5H5K5 113 aa6.04□□□□□ -1.44
TRIM55-203ENST00000350034 MRPL33O75394 65 aaKnown RBP6.04□□□□□ -1.44
TRIM55-203ENST00000350034 RBBP9O75884 186 aa6.04□□□□□ -1.44
TRIM55-203ENST00000350034 MT-ND4P03905 459 aa6.04□□□□□ -1.44
TRIM55-203ENST00000350034 YES1P07947 543 aa6.04□□□□□ -1.44
TRIM55-203ENST00000350034 VSIG8P0DPA2 414 aa6.04□□□□□ -1.44
TRIM55-203ENST00000350034 COX5BP10606 129 aa6.04□□□□□ -1.44
TRIM55-203ENST00000350034 NAT2P11245 290 aa6.04□□□□□ -1.44
TRIM55-203ENST00000350034 B4GALT1P15291 398 aa6.04□□□□□ -1.44
TRIM55-203ENST00000350034 PSMB1P20618 241 aaKnown RBP6.04□□□□□ -1.44
TRIM55-203ENST00000350034 PRSS3P35030 304 aa6.04□□□□□ -1.44
TRIM55-203ENST00000350034 ZNF93P35789 620 aaPredicted RBP6.04□□□□□ -1.44
TRIM55-203ENST00000350034 ALDH3B1P43353 468 aa6.04□□□□□ -1.44
TRIM55-203ENST00000350034 GSK3AP49840 483 aa6.04□□□□□ -1.44
TRIM55-203ENST00000350034 NOVA1P51513 510 aaKnown RBP6.04□□□□□ -1.44
TRIM55-203ENST00000350034 MECP2P51608 486 aaKnown RBP6.04□□□□□ -1.44
TRIM55-203ENST00000350034 CCL11P51671 97 aa6.04□□□□□ -1.44
TRIM55-203ENST00000350034 RRAS2P62070 204 aaPredicted RBP6.04□□□□□ -1.44
TRIM55-203ENST00000350034 ARF1P84077 181 aaKnown RBP6.04□□□□□ -1.44
TRIM55-203ENST00000350034 PMPCAQ10713 525 aa6.04□□□□□ -1.44
TRIM55-203ENST00000350034 SNAI3Q3KNW1 292 aa6.04□□□□□ -1.44
TRIM55-203ENST00000350034 TBRG1Q3YBR2 411 aa6.04□□□□□ -1.44
TRIM55-203ENST00000350034 ZNF260Q3ZCT1 412 aa6.04□□□□□ -1.44
TRIM55-203ENST00000350034 ATAD3CQ5T2N8 411 aa6.04□□□□□ -1.44
TRIM55-203ENST00000350034 TMEM42Q69YG0 159 aa6.04□□□□□ -1.44
TRIM55-203ENST00000350034 OR10K2Q6IF99 312 aa6.04□□□□□ -1.44
TRIM55-203ENST00000350034 RAB12Q6IQ22 244 aa6.04□□□□□ -1.44
TRIM55-203ENST00000350034 COLCA1Q6ZS62 124 aa6.04□□□□□ -1.44
TRIM55-203ENST00000350034 SLC16A14Q7RTX9 510 aa6.04□□□□□ -1.44
TRIM55-203ENST00000350034 RNF144BQ7Z419 303 aa6.04□□□□□ -1.44
TRIM55-203ENST00000350034 LIX1LQ8IVB5 337 aa6.04□□□□□ -1.44
TRIM55-203ENST00000350034 ZNF100Q8IYN0 542 aa6.04□□□□□ -1.44
TRIM55-203ENST00000350034 TCTE3Q8IZS6 198 aa6.04□□□□□ -1.44
TRIM55-203ENST00000350034 KDF1Q8NAX2 398 aaPredicted RBP6.04□□□□□ -1.44
TRIM55-203ENST00000350034 OR56B4Q8NH76 319 aa6.04□□□□□ -1.44
TRIM55-203ENST00000350034 PP6455Q8WZ26 134 aa6.04□□□□□ -1.44
TRIM55-203ENST00000350034 AQP3Q92482 292 aa6.04□□□□□ -1.44
TRIM55-203ENST00000350034 SEH1LQ96EE3 360 aa6.04□□□□□ -1.44
TRIM55-203ENST00000350034 RNF170Q96K19 258 aa6.04□□□□□ -1.44
TRIM55-203ENST00000350034 FAM71F1Q96KD3 344 aaPredicted RBP6.04□□□□□ -1.44
TRIM55-203ENST00000350034 TRAF4Q9BUZ4 470 aaPredicted RBP6.04□□□□□ -1.44
TRIM55-203ENST00000350034 ACTR6Q9GZN1 396 aa6.04□□□□□ -1.44
TRIM55-203ENST00000350034 CHST5Q9GZS9 411 aa6.04□□□□□ -1.44
TRIM55-203ENST00000350034 ATG5Q9H1Y0 275 aa6.04□□□□□ -1.44
TRIM55-203ENST00000350034 OR10A2Q9H208 303 aa6.04□□□□□ -1.44
TRIM55-203ENST00000350034 RGCCQ9H4X1 137 aa6.04□□□□□ -1.44
TRIM55-203ENST00000350034 NUDT15Q9NV35 164 aa6.04□□□□□ -1.44
TRIM55-203ENST00000350034 B3GNT2Q9NY97 397 aa6.04□□□□□ -1.44
TRIM55-203ENST00000350034 TAS2R8Q9NYW2 309 aa6.04□□□□□ -1.44
TRIM55-203ENST00000350034 ZNF221Q9UK13 617 aa6.04□□□□□ -1.44
TRIM55-203ENST00000350034 ZNF175Q9Y473 711 aa6.04□□□□□ -1.44
TRIM55-203ENST00000350034 CSAG2Q9Y5P2 127 aa6.04□□□□□ -1.44
TRIM55-203ENST00000350034 CACNA1CQ13936 2221 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 WDFY3Q8IZQ1 3526 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 A0A0A6YYJ9 748 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 TRAV17A0A0B4J275 112 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 METTL21EPA6NDL7 271 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 EFSO43281 561 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 MTRF1O75570 445 aaKnown RBP6.03□□□□□ -1.44
TRIM55-203ENST00000350034 SCGNO76038 276 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 NDUFB6O95139 128 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 FARS2O95363 451 aaKnown RBP6.03□□□□□ -1.44
TRIM55-203ENST00000350034 DHFRP00374 187 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 CD74P04233 296 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 LPLP06858 475 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 CSF1P09603 554 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 H2AFB2P0C5Z0 115 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 PATE4P0C8F1 98 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 UBBP0CG47 229 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 HTR5AP47898 357 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 SLC6A9P48067 706 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 CCR6P51684 374 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 GUCA2AQ02747 115 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 SRSF1Q07955 248 aaKnown RBP eCLIP6.03□□□□□ -1.44
TRIM55-203ENST00000350034 TNK1Q13470 666 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 UBE2V2Q15819 145 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 KCNJ8Q15842 424 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 C3AR1Q16581 482 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 GSG1Q2KHT4 349 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 MOGAT2Q3SYC2 334 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 SFRP5Q5T4F7 317 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 PLXDC2Q6UX71 529 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 NUFIP2Q7Z417 695 aaKnown RBP6.03□□□□□ -1.44
TRIM55-203ENST00000350034 COMMD2Q86X83 199 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 ANGPTL5Q86XS5 388 aa6.03□□□□□ -1.44
TRIM55-203ENST00000350034 ZBTB8BQ8NAP8 495 aaPredicted RBP6.03□□□□□ -1.44
TRIM55-203ENST00000350034 TMEM229BQ8NBD8 167 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms