RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 CTRB1P17538 263 aa13.48□□□□□ -0.25
UBE3B-202ENST00000342494 BMI1P35226 326 aa13.48□□□□□ -0.25
UBE3B-202ENST00000342494 TMEM215Q68D42 235 aa13.48□□□□□ -0.25
UBE3B-202ENST00000342494 CTRB2Q6GPI1 263 aa13.48□□□□□ -0.25
UBE3B-202ENST00000342494 LFNGQ8NES3 379 aa13.48□□□□□ -0.25
UBE3B-202ENST00000342494 OR13G1Q8NGZ3 307 aa13.48□□□□□ -0.25
UBE3B-202ENST00000342494 OR10D3Q8NH80 312 aa13.48□□□□□ -0.25
UBE3B-202ENST00000342494 APH1BQ8WW43 257 aa13.48□□□□□ -0.25
UBE3B-202ENST00000342494 RPEQ96AT9 228 aa13.48□□□□□ -0.25
UBE3B-202ENST00000342494 PKMYT1Q99640 499 aa13.48□□□□□ -0.25
UBE3B-202ENST00000342494 ARRDC5A6NEK1 342 aa13.48□□□□□ -0.25
UBE3B-202ENST00000342494 NKX2-2O95096 273 aa13.48□□□□□ -0.25
UBE3B-202ENST00000342494 PI3P19957 117 aa13.48□□□□□ -0.25
UBE3B-202ENST00000342494 DGCR2P98153 550 aa13.48□□□□□ -0.25
UBE3B-202ENST00000342494 TCTN1Q2MV58 587 aa13.48□□□□□ -0.25
UBE3B-202ENST00000342494 DRAM2Q6UX65 266 aa13.48□□□□□ -0.25
UBE3B-202ENST00000342494 PARP12Q9H0J9 701 aaKnown RBP13.48□□□□□ -0.25
UBE3B-202ENST00000342494 CSAG2Q9Y5P2 127 aa13.48□□□□□ -0.25
UBE3B-202ENST00000342494 CELA2BP08218 269 aaPredicted RBP13.48□□□□□ -0.25
UBE3B-202ENST00000342494 JUNBP17275 347 aaPredicted RBP13.48□□□□□ -0.25
UBE3B-202ENST00000342494 TOMM34Q15785 309 aaPredicted RBP13.48□□□□□ -0.25
UBE3B-202ENST00000342494 PCNPQ8WW12 178 aaKnown RBP13.48□□□□□ -0.25
UBE3B-202ENST00000342494 CRISPLD2Q9H0B8 497 aa13.48□□□□□ -0.25
UBE3B-202ENST00000342494 RAB1BQ9H0U4 201 aa13.48□□□□□ -0.25
UBE3B-202ENST00000342494 TNFRSF12AQ9NP84 129 aa13.48□□□□□ -0.25
UBE3B-202ENST00000342494 NPAP1Q9NZP6 1156 aa13.48□□□□□ -0.25
UBE3B-202ENST00000342494 XRCC3O43542 346 aa13.48□□□□□ -0.25
UBE3B-202ENST00000342494 LYZL6O75951 148 aa13.48□□□□□ -0.25
UBE3B-202ENST00000342494 SOX8P57073 446 aa13.48□□□□□ -0.25
UBE3B-202ENST00000342494 ADPRHL1Q8NDY3 354 aa13.48□□□□□ -0.25
UBE3B-202ENST00000342494 PTDSS2Q9BVG9 487 aa13.48□□□□□ -0.25
UBE3B-202ENST00000342494 AK3Q9UIJ7 227 aa13.48□□□□□ -0.25
UBE3B-202ENST00000342494 LOXHD1Q8IVV2 1947 aa13.48□□□□□ -0.25
UBE3B-202ENST00000342494 TSTD3H0UI37 97 aa13.48□□□□□ -0.25
UBE3B-202ENST00000342494 ANGPTL7O43827 346 aa13.48□□□□□ -0.25
UBE3B-202ENST00000342494 DHODHQ02127 395 aa13.48□□□□□ -0.25
UBE3B-202ENST00000342494 ZNF816Q0VGE8 651 aaPredicted RBP13.48□□□□□ -0.25
UBE3B-202ENST00000342494 ACOT6Q3I5F7 207 aaPredicted RBP13.48□□□□□ -0.25
UBE3B-202ENST00000342494 KCNRGQ8N5I3 272 aa13.48□□□□□ -0.25
UBE3B-202ENST00000342494 GNPNAT1Q96EK6 184 aaPredicted RBP13.48□□□□□ -0.25
UBE3B-202ENST00000342494 TCEAL7Q9BRU2 100 aa13.48□□□□□ -0.25
UBE3B-202ENST00000342494 CACNA1SQ13698 1873 aa13.48□□□□□ -0.25
UBE3B-202ENST00000342494 CYC1P08574 325 aa13.47□□□□□ -0.25
UBE3B-202ENST00000342494 OR13C7P0DN81 318 aa13.47□□□□□ -0.25
UBE3B-202ENST00000342494 GABRA1P14867 456 aa13.47□□□□□ -0.25
UBE3B-202ENST00000342494 HRH1P35367 487 aa13.47□□□□□ -0.25
UBE3B-202ENST00000342494 P2RX3P56373 397 aa13.47□□□□□ -0.25
UBE3B-202ENST00000342494 CD276Q5ZPR3 534 aa13.47□□□□□ -0.25
UBE3B-202ENST00000342494 GPR87Q9BY21 358 aa13.47□□□□□ -0.25
UBE3B-202ENST00000342494 PPIL1Q9Y3C6 166 aa13.47□□□□□ -0.25
UBE3B-202ENST00000342494 NUDT19A8MXV4 375 aa13.47□□□□□ -0.25
UBE3B-202ENST00000342494 TOX3O15405 576 aaPredicted RBP13.47□□□□□ -0.25
UBE3B-202ENST00000342494 NKG7Q16617 165 aa13.47□□□□□ -0.25
UBE3B-202ENST00000342494 PRSS36Q5K4E3 855 aa13.47□□□□□ -0.25
UBE3B-202ENST00000342494 OR4C3Q8NH37 302 aa13.47□□□□□ -0.25
UBE3B-202ENST00000342494 PLPPR2Q96GM1 343 aa13.47□□□□□ -0.25
UBE3B-202ENST00000342494 TIMM9Q9Y5J7 89 aa13.47□□□□□ -0.25
UBE3B-202ENST00000342494 ZBTB25P24278 435 aa13.47□□□□□ -0.25
UBE3B-202ENST00000342494 SLC7A5P1Q8MH63 180 aa13.47□□□□□ -0.25
UBE3B-202ENST00000342494 POM121L2Q96KW2 1035 aa13.47□□□□□ -0.25
UBE3B-202ENST00000342494 OR2A5Q96R48 311 aa13.47□□□□□ -0.25
UBE3B-202ENST00000342494 DHRS9Q9BPW9 319 aa13.47□□□□□ -0.25
UBE3B-202ENST00000342494 ZNF835Q9Y2P0 537 aa13.47□□□□□ -0.25
UBE3B-202ENST00000342494 RAB19A4D1S5 217 aa13.47□□□□□ -0.25
UBE3B-202ENST00000342494 AQP7P3A6NL99 342 aa13.47□□□□□ -0.25
UBE3B-202ENST00000342494 ZNF724A8MTY0 619 aa13.47□□□□□ -0.25
UBE3B-202ENST00000342494 LRP3O75074 770 aa13.47□□□□□ -0.25
UBE3B-202ENST00000342494 CD3EP07766 207 aa13.47□□□□□ -0.25
UBE3B-202ENST00000342494 SRD5A2P31213 254 aa13.47□□□□□ -0.25
UBE3B-202ENST00000342494 ZNF793Q6ZN11 406 aa13.47□□□□□ -0.25
UBE3B-202ENST00000342494 FAM58AQ8N1B3 248 aa13.47□□□□□ -0.25
UBE3B-202ENST00000342494 OR5B3Q8NH48 314 aa13.47□□□□□ -0.25
UBE3B-202ENST00000342494 DDOQ99489 341 aa13.47□□□□□ -0.25
UBE3B-202ENST00000342494 ACTR3CQ9C0K3 210 aaPredicted RBP13.47□□□□□ -0.25
UBE3B-202ENST00000342494 SLC26A1Q9H2B4 701 aa13.47□□□□□ -0.25
UBE3B-202ENST00000342494 MMP25Q9NPA2 562 aa13.47□□□□□ -0.25
UBE3B-202ENST00000342494 PSENENQ9NZ42 101 aa13.47□□□□□ -0.25
UBE3B-202ENST00000342494 MTCH2Q9Y6C9 303 aa13.47□□□□□ -0.25
UBE3B-202ENST00000342494 COX7A2P2O60397 106 aa13.46□□□□□ -0.25
UBE3B-202ENST00000342494 CD1EP15812 388 aa13.46□□□□□ -0.25
UBE3B-202ENST00000342494 TNFAIP6P98066 277 aaPredicted RBP13.46□□□□□ -0.25
UBE3B-202ENST00000342494 RNF167Q9H6Y7 350 aa13.46□□□□□ -0.25
UBE3B-202ENST00000342494 SPAARA0A1B0GVQ0 90 aa13.46□□□□□ -0.25
UBE3B-202ENST00000342494 XKRY2A2RUG3 117 aa13.46□□□□□ -0.25
UBE3B-202ENST00000342494 SMLR1H3BR10 107 aa13.46□□□□□ -0.25
UBE3B-202ENST00000342494 CHEK1O14757 476 aa13.46□□□□□ -0.25
UBE3B-202ENST00000342494 OIP5O43482 229 aa13.46□□□□□ -0.25
UBE3B-202ENST00000342494 CYTIPO60759 359 aa13.46□□□□□ -0.25
UBE3B-202ENST00000342494 GPX5O75715 221 aa13.46□□□□□ -0.25
UBE3B-202ENST00000342494 DRD3P35462 400 aa13.46□□□□□ -0.25
UBE3B-202ENST00000342494 PIGPP57054 158 aa13.46□□□□□ -0.25
UBE3B-202ENST00000342494 KLF3P57682 345 aaPredicted RBP13.46□□□□□ -0.25
UBE3B-202ENST00000342494 BAMBIQ13145 260 aa13.46□□□□□ -0.25
UBE3B-202ENST00000342494 PRSS41Q7RTY9 318 aa13.46□□□□□ -0.25
UBE3B-202ENST00000342494 OR10V1Q8NGI7 309 aa13.46□□□□□ -0.25
UBE3B-202ENST00000342494 EXTL1Q92935 676 aa13.46□□□□□ -0.25
UBE3B-202ENST00000342494 LRP12Q9Y561 859 aa13.46□□□□□ -0.25
UBE3B-202ENST00000342494 EVPLQ92817 2033 aa13.46□□□□□ -0.25
UBE3B-202ENST00000342494 M0R1X1 148 aa13.46□□□□□ -0.25
UBE3B-202ENST00000342494 CA6P23280 308 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms