RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 B3GALT5-AS1P59052 145 aa12.8□□□□□ -0.36
TPM3-206ENST00000330188 RPS18P62269 152 aaKnown RBP12.8□□□□□ -0.36
TPM3-206ENST00000330188 CAMK2BQ13554 666 aa12.8□□□□□ -0.36
TPM3-206ENST00000330188 RSPO1Q2MKA7 263 aaPredicted RBP12.8□□□□□ -0.36
TPM3-206ENST00000330188 PLAC9Q5JTB6 97 aa12.8□□□□□ -0.36
TPM3-206ENST00000330188 DTX1Q86Y01 620 aa12.8□□□□□ -0.36
TPM3-206ENST00000330188 CCDC28AQ8IWP9 274 aa12.8□□□□□ -0.36
TPM3-206ENST00000330188 GPER1Q99527 375 aa12.8□□□□□ -0.36
TPM3-206ENST00000330188 RBM24Q9BX46 236 aaKnown RBP12.8□□□□□ -0.36
TPM3-206ENST00000330188 TMEM59Q9BXS4 323 aa12.8□□□□□ -0.36
TPM3-206ENST00000330188 ZNF230Q9UIE0 474 aaPredicted RBP12.8□□□□□ -0.36
TPM3-206ENST00000330188 KIF25Q9UIL4 384 aa12.8□□□□□ -0.36
TPM3-206ENST00000330188 NOP16Q9Y3C1 178 aaKnown RBP12.8□□□□□ -0.36
TPM3-206ENST00000330188 A0A0G2JMM0 328 aa12.8□□□□□ -0.36
TPM3-206ENST00000330188 A0A0U1RQV5 110 aa12.8□□□□□ -0.36
TPM3-206ENST00000330188 A0A1W2PPB8 328 aa12.8□□□□□ -0.36
TPM3-206ENST00000330188 A0A1W2PRS3 328 aa12.8□□□□□ -0.36
TPM3-206ENST00000330188 KIR3DP1A8MWS1 328 aa12.8□□□□□ -0.36
TPM3-206ENST00000330188 B4E171 279 aa12.8□□□□□ -0.36
TPM3-206ENST00000330188 F5H5K5 113 aa12.8□□□□□ -0.36
TPM3-206ENST00000330188 B3GALNT1O75752 331 aa12.8□□□□□ -0.36
TPM3-206ENST00000330188 CD8AP01732 235 aa12.8□□□□□ -0.36
TPM3-206ENST00000330188 IGHEP01854 428 aa12.8□□□□□ -0.36
TPM3-206ENST00000330188 GSTP1P09211 210 aaKnown RBP12.8□□□□□ -0.36
TPM3-206ENST00000330188 PRF1P14222 555 aa12.8□□□□□ -0.36
TPM3-206ENST00000330188 RPA2P15927 270 aa12.8□□□□□ -0.36
TPM3-206ENST00000330188 HIST1H1DP16402 221 aaKnown RBP12.8□□□□□ -0.36
TPM3-206ENST00000330188 TBPP20226 339 aa12.8□□□□□ -0.36
TPM3-206ENST00000330188 POU3F2P20265 443 aaPredicted RBP12.8□□□□□ -0.36
TPM3-206ENST00000330188 TSPAN7P41732 249 aa12.8□□□□□ -0.36
TPM3-206ENST00000330188 SRSF4Q08170 494 aaKnown RBP12.8□□□□□ -0.36
TPM3-206ENST00000330188 EIF3IQ13347 325 aaKnown RBP12.8□□□□□ -0.36
TPM3-206ENST00000330188 CRIP3Q6Q6R5 217 aa12.8□□□□□ -0.36
TPM3-206ENST00000330188 PPP1R32Q7Z5V6 425 aa12.8□□□□□ -0.36
TPM3-206ENST00000330188 LYG2Q86SG7 212 aa12.8□□□□□ -0.36
TPM3-206ENST00000330188 RAB3CQ96E17 227 aa12.8□□□□□ -0.36
TPM3-206ENST00000330188 CYYR1Q96J86 154 aa12.8□□□□□ -0.36
TPM3-206ENST00000330188 SGCZQ96LD1 299 aa12.8□□□□□ -0.36
TPM3-206ENST00000330188 CST11Q9H112 138 aa12.8□□□□□ -0.36
TPM3-206ENST00000330188 SMOC1Q9H4F8 434 aa12.8□□□□□ -0.36
TPM3-206ENST00000330188 V9GYS6 101 aa12.8□□□□□ -0.36
TPM3-206ENST00000330188 OR2AT4A6NND4 320 aa12.79□□□□□ -0.36
TPM3-206ENST00000330188 SMAD9O15198 467 aaKnown RBP12.79□□□□□ -0.36
TPM3-206ENST00000330188 CRTAPO75718 401 aaPredicted RBP12.79□□□□□ -0.36
TPM3-206ENST00000330188 IL2RAP01589 272 aa12.79□□□□□ -0.36
TPM3-206ENST00000330188 PMP2P02689 132 aa12.79□□□□□ -0.36
TPM3-206ENST00000330188 OTX1P32242 354 aaPredicted RBP12.79□□□□□ -0.36
TPM3-206ENST00000330188 THBS4P35443 961 aa12.79□□□□□ -0.36
TPM3-206ENST00000330188 SLC6A9P48067 706 aa12.79□□□□□ -0.36
TPM3-206ENST00000330188 Q0VFX4 171 aa12.79□□□□□ -0.36
TPM3-206ENST00000330188 ECH1Q13011 328 aa12.79□□□□□ -0.36
TPM3-206ENST00000330188 PPP1R1AQ13522 171 aa12.79□□□□□ -0.36
TPM3-206ENST00000330188 AANATQ16613 207 aa12.79□□□□□ -0.36
TPM3-206ENST00000330188 DMRTC1Q5HYR2 192 aa12.79□□□□□ -0.36
TPM3-206ENST00000330188 LPCAT3Q6P1A2 487 aa12.79□□□□□ -0.36
TPM3-206ENST00000330188 C20orf196Q8IYI0 205 aa12.79□□□□□ -0.36
TPM3-206ENST00000330188 BEST3Q8N1M1 668 aa12.79□□□□□ -0.36
TPM3-206ENST00000330188 INTS12Q96CB8 462 aaKnown RBP12.79□□□□□ -0.36
TPM3-206ENST00000330188 ULBP2Q9BZM5 246 aa12.79□□□□□ -0.36
TPM3-206ENST00000330188 I3L521 148 aa12.79□□□□□ -0.36
TPM3-206ENST00000330188 SHOXO15266 292 aa12.79□□□□□ -0.36
TPM3-206ENST00000330188 DHRS3O75911 302 aa12.79□□□□□ -0.36
TPM3-206ENST00000330188 PDGFAP04085 211 aa12.79□□□□□ -0.36
TPM3-206ENST00000330188 GP1BAP07359 652 aa12.79□□□□□ -0.36
TPM3-206ENST00000330188 UBBP0CG47 229 aa12.79□□□□□ -0.36
TPM3-206ENST00000330188 NAT1P18440 290 aa12.79□□□□□ -0.36
TPM3-206ENST00000330188 SRD5A2P31213 254 aa12.79□□□□□ -0.36
TPM3-206ENST00000330188 OTX2P32243 289 aa12.79□□□□□ -0.36
TPM3-206ENST00000330188 CHAF1BQ13112 559 aa12.79□□□□□ -0.36
TPM3-206ENST00000330188 Q6ZSR3 168 aa12.79□□□□□ -0.36
TPM3-206ENST00000330188 NAXDQ8IW45 347 aa12.79□□□□□ -0.36
TPM3-206ENST00000330188 OR4K15Q8NH41 348 aa12.79□□□□□ -0.36
TPM3-206ENST00000330188 ZNF837Q96EG3 531 aaPredicted RBP12.79□□□□□ -0.36
TPM3-206ENST00000330188 MFFQ9GZY8 342 aa12.79□□□□□ -0.36
TPM3-206ENST00000330188 FN3KRPQ9HA64 309 aa12.79□□□□□ -0.36
TPM3-206ENST00000330188 ZNF224Q9NZL3 707 aa12.79□□□□□ -0.36
TPM3-206ENST00000330188 SDK2Q58EX2 2172 aa12.79□□□□□ -0.36
TPM3-206ENST00000330188 C9orf170A2RU37 121 aa12.78□□□□□ -0.36
TPM3-206ENST00000330188 GJE1A6NN92 205 aa12.78□□□□□ -0.36
TPM3-206ENST00000330188 MFNGO00587 321 aa12.78□□□□□ -0.36
TPM3-206ENST00000330188 RAD51DO75771 328 aa12.78□□□□□ -0.36
TPM3-206ENST00000330188 P04436 131 aa12.78□□□□□ -0.36
TPM3-206ENST00000330188 IFNA6P05013 189 aa12.78□□□□□ -0.36
TPM3-206ENST00000330188 ACP1P24666 158 aa12.78□□□□□ -0.36
TPM3-206ENST00000330188 ZNF84P51523 738 aa12.78□□□□□ -0.36
TPM3-206ENST00000330188 RAC3P60763 192 aa12.78□□□□□ -0.36
TPM3-206ENST00000330188 KISS1Q15726 138 aa12.78□□□□□ -0.36
TPM3-206ENST00000330188 GSG1LQ6UXU4 331 aa12.78□□□□□ -0.36
TPM3-206ENST00000330188 YRDCQ86U90 279 aaKnown RBP12.78□□□□□ -0.36
TPM3-206ENST00000330188 OR56B1Q8NGI3 324 aa12.78□□□□□ -0.36
TPM3-206ENST00000330188 NPRL2Q8WTW4 380 aa12.78□□□□□ -0.36
TPM3-206ENST00000330188 FBXO17Q96EF6 278 aa12.78□□□□□ -0.36
TPM3-206ENST00000330188 WBP1Q96G27 269 aa12.78□□□□□ -0.36
TPM3-206ENST00000330188 SF3B5Q9BWJ5 86 aaKnown RBP12.78□□□□□ -0.36
TPM3-206ENST00000330188 TCFL5Q9UL49 500 aa12.78□□□□□ -0.36
TPM3-206ENST00000330188 FLVCR1Q9Y5Y0 555 aa12.78□□□□□ -0.36
TPM3-206ENST00000330188 PCSK5Q92824 1860 aa12.78□□□□□ -0.36
TPM3-206ENST00000330188 M0R135 149 aa12.77□□□□□ -0.36
TPM3-206ENST00000330188 CCSO14618 274 aa12.77□□□□□ -0.36
TPM3-206ENST00000330188 DNPH1O43598 174 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms