RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 IFNA10P01566 189 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 CD8AP01732 235 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 OR8U8P0C7N1 319 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 VSIG10L2P0DP72 767 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 SLC2A1P11166 492 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 SLC25A4P12235 298 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 CTLA4P16410 223 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 ATF1P18846 271 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 DLSTP36957 453 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 EIF3IQ13347 325 aaKnown RBP11.58□□□□□ -0.56
CPNE1-201ENST00000317677 CDK5R1Q15078 307 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 C2orf68Q2NKX9 166 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 NKAPLQ5M9Q1 402 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 H1FNTQ75WM6 255 aaPredicted RBP11.58□□□□□ -0.56
CPNE1-201ENST00000317677 TMPRSS7Q7RTY8 843 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 TMEM156Q8N614 296 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 KDF1Q8NAX2 398 aaPredicted RBP11.58□□□□□ -0.56
CPNE1-201ENST00000317677 RPS4Y2Q8TD47 263 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 C15orf40Q8WUR7 153 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 ASB10Q8WXI3 467 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 ARL11Q969Q4 196 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 GNRHR2Q96P88 292 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 AMELYQ99218 206 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 GINS4Q9BRT9 223 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 C2orf88Q9BSF0 95 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 ACKR4Q9NPB9 350 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 UQCC1Q9NVA1 299 aa11.58□□□□□ -0.56
CPNE1-201ENST00000317677 KMT2BQ9UMN6 2715 aaPredicted RBP11.57□□□□□ -0.56
CPNE1-201ENST00000317677 AP4M1O00189 453 aa11.57□□□□□ -0.56
CPNE1-201ENST00000317677 TNFSF15O95150 251 aa11.57□□□□□ -0.56
CPNE1-201ENST00000317677 OR6A2O95222 327 aa11.57□□□□□ -0.56
CPNE1-201ENST00000317677 ABHD16AO95870 558 aa11.57□□□□□ -0.56
CPNE1-201ENST00000317677 LIFP15018 202 aa11.57□□□□□ -0.56
CPNE1-201ENST00000317677 RBP2P50120 134 aa11.57□□□□□ -0.56
CPNE1-201ENST00000317677 TAS2R43P59537 309 aa11.57□□□□□ -0.56
CPNE1-201ENST00000317677 RPS11P62280 158 aaKnown RBP eCLIP11.57□□□□□ -0.56
CPNE1-201ENST00000317677 RPS15P62841 145 aaKnown RBP11.57□□□□□ -0.56
CPNE1-201ENST00000317677 IL34Q6ZMJ4 242 aa11.57□□□□□ -0.56
CPNE1-201ENST00000317677 DNM1P46Q6ZS02 220 aa11.57□□□□□ -0.56
CPNE1-201ENST00000317677 ARRDC1Q8N5I2 433 aa11.57□□□□□ -0.56
CPNE1-201ENST00000317677 OR52I2Q8NH67 350 aa11.57□□□□□ -0.56
CPNE1-201ENST00000317677 HIST1H2BAQ96A08 127 aa11.57□□□□□ -0.56
CPNE1-201ENST00000317677 MALSU1Q96EH3 234 aa11.57□□□□□ -0.56
CPNE1-201ENST00000317677 LURAP1Q96LR2 239 aa11.57□□□□□ -0.56
CPNE1-201ENST00000317677 C5orf34Q96MH7 638 aa11.57□□□□□ -0.56
CPNE1-201ENST00000317677 TSPAN10Q9H1Z9 355 aaPredicted RBP11.57□□□□□ -0.56
CPNE1-201ENST00000317677 MRPL22Q9NWU5 206 aaKnown RBP11.57□□□□□ -0.56
CPNE1-201ENST00000317677 ALKBH4Q9NXW9 302 aa11.57□□□□□ -0.56
CPNE1-201ENST00000317677 MRM2Q9UI43 246 aaKnown RBP11.57□□□□□ -0.56
CPNE1-201ENST00000317677 GNG8Q9UK08 70 aa11.57□□□□□ -0.56
CPNE1-201ENST00000317677 CBY1Q9Y3M2 126 aa11.57□□□□□ -0.56
CPNE1-201ENST00000317677 AKAP13Q12802 2813 aa11.57□□□□□ -0.56
CPNE1-201ENST00000317677 TRAV14DV4A0A0A6YYC5 116 aa11.56□□□□□ -0.56
CPNE1-201ENST00000317677 IGKV1D-43A0A0B4J1Z2 117 aa11.56□□□□□ -0.56
CPNE1-201ENST00000317677 ZIC3O60481 467 aa11.56□□□□□ -0.56
CPNE1-201ENST00000317677 RAMP1O60894 148 aa11.56□□□□□ -0.56
CPNE1-201ENST00000317677 SERPINA7P05543 415 aa11.56□□□□□ -0.56
CPNE1-201ENST00000317677 SNRPBP14678 240 aaKnown RBP11.56□□□□□ -0.56
CPNE1-201ENST00000317677 ITGA3P26006 1051 aa11.56□□□□□ -0.56
CPNE1-201ENST00000317677 RAB5CP51148 216 aa11.56□□□□□ -0.56
CPNE1-201ENST00000317677 CD81P60033 236 aa11.56□□□□□ -0.56
CPNE1-201ENST00000317677 NANOS3P60323 173 aaKnown RBP11.56□□□□□ -0.56
CPNE1-201ENST00000317677 ACTA2P62736 377 aa11.56□□□□□ -0.56
CPNE1-201ENST00000317677 ACTG2P63267 376 aa11.56□□□□□ -0.56
CPNE1-201ENST00000317677 SORDQ00796 357 aa11.56□□□□□ -0.56
CPNE1-201ENST00000317677 TLE3Q04726 772 aa11.56□□□□□ -0.56
CPNE1-201ENST00000317677 ALKBH1Q13686 389 aaKnown RBP11.56□□□□□ -0.56
CPNE1-201ENST00000317677 DCAF12L2Q5VW00 463 aa11.56□□□□□ -0.56
CPNE1-201ENST00000317677 ANGPTL5Q86XS5 388 aa11.56□□□□□ -0.56
CPNE1-201ENST00000317677 CMTM4Q8IZR5 234 aa11.56□□□□□ -0.56
CPNE1-201ENST00000317677 ADAMTS17Q8TE56 1095 aa11.56□□□□□ -0.56
CPNE1-201ENST00000317677 SNX33Q8WV41 574 aa11.56□□□□□ -0.56
CPNE1-201ENST00000317677 ZCCHC14Q8WYQ9 949 aaKnown RBP11.56□□□□□ -0.56
CPNE1-201ENST00000317677 GHSRQ92847 366 aa11.56□□□□□ -0.56
CPNE1-201ENST00000317677 TOLLIPQ9H0E2 274 aa11.56□□□□□ -0.56
CPNE1-201ENST00000317677 WDR13Q9H1Z4 485 aa11.56□□□□□ -0.56
CPNE1-201ENST00000317677 MED29Q9NX70 200 aa11.56□□□□□ -0.56
CPNE1-201ENST00000317677 IL17BQ9UHF5 180 aa11.56□□□□□ -0.56
CPNE1-201ENST00000317677 KIAA1549Q9HCM3 1950 aa11.56□□□□□ -0.56
CPNE1-201ENST00000317677 ZNF879B4DU55 563 aa11.56□□□□□ -0.56
CPNE1-201ENST00000317677 XKRYO14609 159 aa11.56□□□□□ -0.56
CPNE1-201ENST00000317677 UPK3AO75631 287 aa11.56□□□□□ -0.56
CPNE1-201ENST00000317677 ACTL6AO96019 429 aa11.56□□□□□ -0.56
CPNE1-201ENST00000317677 OR8G3PP0DMU2 310 aa11.56□□□□□ -0.56
CPNE1-201ENST00000317677 DNASE1L1P49184 302 aa11.56□□□□□ -0.56
CPNE1-201ENST00000317677 PPT1P50897 306 aa11.56□□□□□ -0.56
CPNE1-201ENST00000317677 SIRPAP78324 504 aa11.56□□□□□ -0.56
CPNE1-201ENST00000317677 FMODQ06828 376 aa11.56□□□□□ -0.56
CPNE1-201ENST00000317677 NKPD1Q17RQ9 610 aa11.56□□□□□ -0.56
CPNE1-201ENST00000317677 TMEM244Q5VVB8 128 aa11.56□□□□□ -0.56
CPNE1-201ENST00000317677 DPY19L4Q7Z388 723 aa11.56□□□□□ -0.56
CPNE1-201ENST00000317677 TMPRSS12Q86WS5 348 aa11.56□□□□□ -0.56
CPNE1-201ENST00000317677 GTPBP8Q8N3Z3 284 aaPredicted RBP11.56□□□□□ -0.56
CPNE1-201ENST00000317677 OR6N2Q8NGY6 317 aa11.56□□□□□ -0.56
CPNE1-201ENST00000317677 SMIM19Q96E16 107 aa11.56□□□□□ -0.56
CPNE1-201ENST00000317677 KCNK17Q96T54 332 aa11.56□□□□□ -0.56
CPNE1-201ENST00000317677 MMP26Q9NRE1 261 aa11.56□□□□□ -0.56
CPNE1-201ENST00000317677 SERINC1Q9NRX5 453 aa11.56□□□□□ -0.56
CPNE1-201ENST00000317677 RCC2Q9P258 522 aaKnown RBP11.56□□□□□ -0.56
CPNE1-201ENST00000317677 TNFSF18Q9UNG2 199 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms