RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 JKAMPQ9P055 326 aa7.4□□□□□ -1.22
PTPDC1-201ENST00000288976 USP9YO00507 2555 aaPredicted RBP7.4□□□□□ -1.23
PTPDC1-201ENST00000288976 FXYD6-FXYD2A0A087WZ82 144 aa7.4□□□□□ -1.23
PTPDC1-201ENST00000288976 hCG_1809904A0A1W2PP81 198 aa7.4□□□□□ -1.23
PTPDC1-201ENST00000288976 A0A1W2PPE2 198 aa7.4□□□□□ -1.23
PTPDC1-201ENST00000288976 A0A1W2PR64 198 aa7.4□□□□□ -1.23
PTPDC1-201ENST00000288976 A0A1W2PRV1 198 aa7.4□□□□□ -1.23
PTPDC1-201ENST00000288976 BET1O15155 118 aa7.4□□□□□ -1.23
PTPDC1-201ENST00000288976 PCMT1P22061 227 aa7.4□□□□□ -1.23
PTPDC1-201ENST00000288976 MPGP29372 298 aa7.4□□□□□ -1.23
PTPDC1-201ENST00000288976 SNCAP37840 140 aa7.4□□□□□ -1.23
PTPDC1-201ENST00000288976 GALEQ14376 348 aa7.4□□□□□ -1.23
PTPDC1-201ENST00000288976 SLC36A2Q495M3 483 aa7.4□□□□□ -1.23
PTPDC1-201ENST00000288976 FAM27BQ5VT28 67 aa7.4□□□□□ -1.23
PTPDC1-201ENST00000288976 PAMR1Q6UXH9 720 aa7.4□□□□□ -1.23
PTPDC1-201ENST00000288976 Q6ZT83 130 aa7.4□□□□□ -1.23
PTPDC1-201ENST00000288976 PGAP1Q75T13 922 aa7.4□□□□□ -1.23
PTPDC1-201ENST00000288976 NUFIP2Q7Z417 695 aaKnown RBP7.4□□□□□ -1.23
PTPDC1-201ENST00000288976 BCDIN3DQ7Z5W3 292 aaKnown RBP7.4□□□□□ -1.23
PTPDC1-201ENST00000288976 OR13C9Q8NGT0 318 aa7.4□□□□□ -1.23
PTPDC1-201ENST00000288976 OTOSQ8NHW6 89 aa7.4□□□□□ -1.23
PTPDC1-201ENST00000288976 C22orf15Q8WYQ4 148 aa7.4□□□□□ -1.23
PTPDC1-201ENST00000288976 OR5M11Q96RB7 305 aa7.4□□□□□ -1.23
PTPDC1-201ENST00000288976 FXYD6Q9H0Q3 95 aa7.4□□□□□ -1.23
PTPDC1-201ENST00000288976 SIAEQ9HAT2 523 aa7.4□□□□□ -1.23
PTPDC1-201ENST00000288976 ELOVL5Q9NYP7 299 aa7.4□□□□□ -1.23
PTPDC1-201ENST00000288976 COA3Q9Y2R0 106 aaPredicted RBP7.4□□□□□ -1.23
PTPDC1-201ENST00000288976 EPG5Q9HCE0 2579 aa7.4□□□□□ -1.23
PTPDC1-201ENST00000288976 A0A0A6YYH2 397 aa7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 MEIS3P1A6NDR6 274 aa7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 A6NJ64 397 aa7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 DCTN6O00399 190 aa7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 CCL21O00585 134 aa7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 SULT1C4O75897 302 aa7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 CD1AP06126 327 aa7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 SERPINE2P07093 398 aa7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 NTF4P34130 210 aa7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 PSMD7P51665 324 aa7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 PCBD1P61457 104 aa7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 ERVK-16P61578 105 aa7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 LSRQ86X29 649 aaPredicted RBP7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 SERPINA12Q8IW75 414 aa7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 NANOGP1Q8N7R0 232 aa7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 ZNF649Q9BS31 505 aa7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 MRPL22Q9NWU5 206 aaKnown RBP7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 RSL24D1Q9UHA3 163 aaKnown RBP7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 RALYQ9UKM9 306 aaKnown RBP7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 TRAPPC2LQ9UL33 140 aa7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 LSM2Q9Y333 95 aaKnown RBP7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 OR2AT4A6NND4 320 aa7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 P2RY10O00398 339 aa7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 SCGB2A1O75556 95 aa7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 ZNF83P51522 516 aa7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 FMODQ06828 376 aa7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 PLA2G7Q13093 441 aa7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 IKZF1Q13422 519 aa7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 AQP6Q13520 282 aa7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 P2RY6Q15077 328 aa7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 CDONQ4KMG0 1287 aa7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 DEGS2Q6QHC5 323 aa7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 SPARTQ8N0X7 666 aa7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 GLYATL2Q8WU03 294 aa7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 TECTBQ96PL2 329 aa7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 ANKRD11Q6UB99 2663 aaPredicted RBP7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 LRRC30A6NM36 301 aa7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 UPK3AO75631 287 aa7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 DCTDP32321 178 aa7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 C3orf36Q3SXR2 165 aa7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 CFAP77Q6ZQR2 320 aa7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 MRGPRGQ86SM5 289 aa7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 CSNK2A3Q8NEV1 391 aa7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 ZNRF4Q8WWF5 429 aa7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 CREB3L1Q96BA8 519 aa7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 STARD4Q96DR4 205 aa7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 DMRTB1Q96MA1 342 aa7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 ALKBH3Q96Q83 286 aaPredicted RBP7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 ERVK13-1Q9NX77 482 aa7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 CYB5R1Q9UHQ9 305 aa7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 ZGRF1Q86YA3 2104 aa7.39□□□□□ -1.23
PTPDC1-201ENST00000288976 TRAV18A0A075B6X5 111 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 IGKV1D-43A0A0B4J1Z2 117 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 A0A1B0GUH1 482 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 ANKRD61A6NGH8 418 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 PPIHO43447 177 aaKnown RBP7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 ZNF254O75437 659 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 TOXO94900 526 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 PTHP01270 115 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 MTCP1P56278 107 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 TAS2R43P59537 309 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 ROM1Q03395 351 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 KRTAP27-1Q3LI81 207 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 ZNF684Q5T5D7 378 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 HES5Q5TA89 166 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 GPR157Q5UAW9 335 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 OR1K1Q8NGR3 316 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 MUL1Q969V5 352 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 FOXB1Q99853 325 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 SUCNR1Q9BXA5 334 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 AASSQ9UDR5 926 aa7.38□□□□□ -1.23
PTPDC1-201ENST00000288976 SCP2D1Q9UJQ7 156 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms