RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 OR8B4Q96RC9 309 aa10.39□□□□□ -0.75
VPS33A-201ENST00000267199 CABLES2Q9BTV7 478 aa10.39□□□□□ -0.75
VPS33A-201ENST00000267199 FAM60AQ9NP50 221 aa10.39□□□□□ -0.75
VPS33A-201ENST00000267199 GVINP1Q7Z2Y8 2422 aa10.39□□□□□ -0.75
VPS33A-201ENST00000267199 OTOFQ9HC10 1997 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 A0A1W2PPH5 198 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 C9orf170A2RU37 121 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 H3BP45 60 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 ALOX12BO75342 701 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 MT-ND4LP03901 98 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 GABRG2P18507 467 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 COL9A1P20849 921 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 NFYBP25208 207 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 DCDP81605 110 aaKnown RBP10.38□□□□□ -0.75
VPS33A-201ENST00000267199 KCNIP4Q6PIL6 250 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 AKR7LQ8NHP1 331 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 GPR173Q9NS66 373 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 TMEM100Q9NV29 134 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 CENPVL1A0A0U1RR11 272 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 A0A1W2PPC4 97 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 SHISA3A0PJX4 238 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 H0YIG0 161 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 H7BYZ3 331 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 GSTZ1O43708 216 aaPredicted RBP10.38□□□□□ -0.75
VPS33A-201ENST00000267199 CLDN1O95832 211 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 GUSBP08236 651 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 CRYBA2P53672 197 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 RPS15P62841 145 aaKnown RBP10.38□□□□□ -0.75
VPS33A-201ENST00000267199 PPIAP62937 165 aaKnown RBP10.38□□□□□ -0.75
VPS33A-201ENST00000267199 NKAIN1Q4KMZ8 207 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 LAMTOR1Q6IAA8 161 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 OR8G2PQ6IF36 304 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 UBAC2Q8NBM4 344 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 OTOSQ8NHW6 89 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 EMG1Q92979 244 aaKnown RBP10.38□□□□□ -0.75
VPS33A-201ENST00000267199 TXNIPQ9H3M7 391 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 TRAV8-7A0A075B6U6 113 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 OR5H8P0DN80 308 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 SRSF5Q13243 272 aaKnown RBP10.38□□□□□ -0.75
VPS33A-201ENST00000267199 INPP5JQ15735 1006 aaPredicted RBP10.38□□□□□ -0.75
VPS33A-201ENST00000267199 MPPED2Q15777 294 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 PCK2Q16822 640 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 CBLN3Q6UW01 205 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 TMEM104Q8NE00 496 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 FLRT3Q9NZU0 649 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 LRP12Q9Y561 859 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 R4GMQ9 66 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 A0A1W2PNR3 127 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 ZNF727A8MUV8 499 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 SSSCA1O60232 199 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 CST7O76096 145 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 ABOP16442 354 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 TAS2R30P59541 319 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 LPAL2Q16609 132 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 RALGAPA2Q2PPJ7 1873 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 TMEM268Q5VZI3 342 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 FAM109BQ6ICB4 259 aaPredicted RBP10.38□□□□□ -0.75
VPS33A-201ENST00000267199 RPUSD4Q96CM3 377 aaKnown RBP10.38□□□□□ -0.75
VPS33A-201ENST00000267199 ZCCHC4Q9H5U6 513 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 NECAP2Q9NVZ3 263 aa10.38□□□□□ -0.75
VPS33A-201ENST00000267199 LIMS1P48059 325 aa10.37□□□□□ -0.75
VPS33A-201ENST00000267199 PIGPP57054 158 aa10.37□□□□□ -0.75
VPS33A-201ENST00000267199 SKA3Q8IX90 412 aa10.37□□□□□ -0.75
VPS33A-201ENST00000267199 OR6S1Q8NH40 331 aa10.37□□□□□ -0.75
VPS33A-201ENST00000267199 RTN4IP1Q8WWV3 396 aaPredicted RBP10.37□□□□□ -0.75
VPS33A-201ENST00000267199 OR14J1Q9UGF5 321 aa10.37□□□□□ -0.75
VPS33A-201ENST00000267199 SLC5A6Q9Y289 635 aa10.37□□□□□ -0.75
VPS33A-201ENST00000267199 AMDHD2Q9Y303 409 aa10.37□□□□□ -0.75
VPS33A-201ENST00000267199 NSG1A0A0A6YYJ2 146 aa10.37□□□□□ -0.75
VPS33A-201ENST00000267199 METTL12A8MUP2 240 aa10.37□□□□□ -0.75
VPS33A-201ENST00000267199 HSD17B6O14756 317 aa10.37□□□□□ -0.75
VPS33A-201ENST00000267199 VSIG10L2P0DP72 767 aa10.37□□□□□ -0.75
VPS33A-201ENST00000267199 GLRA1P23415 457 aa10.37□□□□□ -0.75
VPS33A-201ENST00000267199 DUSP1P28562 367 aa10.37□□□□□ -0.75
VPS33A-201ENST00000267199 LYSMD4Q5XG99 296 aa10.37□□□□□ -0.75
VPS33A-201ENST00000267199 OR2A2Q6IF42 318 aa10.37□□□□□ -0.75
VPS33A-201ENST00000267199 RBMS3Q6XE24 437 aaKnown RBP10.37□□□□□ -0.75
VPS33A-201ENST00000267199 TMPPEQ6ZT21 453 aa10.37□□□□□ -0.75
VPS33A-201ENST00000267199 TSEN54Q7Z6J9 526 aaKnown RBP10.37□□□□□ -0.75
VPS33A-201ENST00000267199 LSRQ86X29 649 aaPredicted RBP10.37□□□□□ -0.75
VPS33A-201ENST00000267199 ASB13Q8WXK3 278 aa10.37□□□□□ -0.75
VPS33A-201ENST00000267199 PSMF1Q92530 271 aa10.37□□□□□ -0.75
VPS33A-201ENST00000267199 MRM2Q9UI43 246 aaKnown RBP10.37□□□□□ -0.75
VPS33A-201ENST00000267199 IGKV1-8A0A0C4DH67 115 aa10.37□□□□□ -0.75
VPS33A-201ENST00000267199 E5RGE8 158 aa10.37□□□□□ -0.75
VPS33A-201ENST00000267199 FOLR3P41439 243 aa10.37□□□□□ -0.75
VPS33A-201ENST00000267199 EFNB2P52799 333 aa10.37□□□□□ -0.75
VPS33A-201ENST00000267199 Q6ZS52 159 aa10.37□□□□□ -0.75
VPS33A-201ENST00000267199 PUSL1Q8N0Z8 303 aaKnown RBP10.37□□□□□ -0.75
VPS33A-201ENST00000267199 SLC38A9Q8NBW4 561 aa10.37□□□□□ -0.75
VPS33A-201ENST00000267199 LHX9Q9NQ69 397 aa10.37□□□□□ -0.75
VPS33A-201ENST00000267199 NSG2Q9Y328 171 aa10.37□□□□□ -0.75
VPS33A-201ENST00000267199 SF3B6Q9Y3B4 125 aaKnown RBP10.37□□□□□ -0.75
VPS33A-201ENST00000267199 DSPPQ9NZW4 1301 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 CTDSPLO15194 276 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 OGG1O15527 345 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 MBTPS2O43462 519 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 LAMTOR5O43504 91 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 RFC3P40938 356 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 HOXA1P49639 335 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms