RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 CD81P60033 236 aa11□□□□□ -0.65
CHMP2B-201ENST00000263780 SQSTM1Q13501 440 aa11□□□□□ -0.65
CHMP2B-201ENST00000263780 C1orf140Q5VVS0 124 aa11□□□□□ -0.65
CHMP2B-201ENST00000263780 ZNF529Q6P280 563 aa11□□□□□ -0.65
CHMP2B-201ENST00000263780 POMZP3Q6PJE2 187 aa11□□□□□ -0.65
CHMP2B-201ENST00000263780 CHRDL2Q6WN34 429 aa11□□□□□ -0.65
CHMP2B-201ENST00000263780 RNF133Q8WVZ7 376 aa11□□□□□ -0.65
CHMP2B-201ENST00000263780 UNKLQ9H9P5 680 aaKnown RBP11□□□□□ -0.65
CHMP2B-201ENST00000263780 CENPMQ9NSP4 180 aa11□□□□□ -0.65
CHMP2B-201ENST00000263780 OSGIN2Q9Y236 505 aa11□□□□□ -0.65
CHMP2B-201ENST00000263780 MRPS28Q9Y2Q9 187 aaKnown RBP11□□□□□ -0.65
CHMP2B-201ENST00000263780 A0A1B0GW64 132 aa11□□□□□ -0.65
CHMP2B-201ENST00000263780 FRG2CA6NGY1 282 aa11□□□□□ -0.65
CHMP2B-201ENST00000263780 PRAMEF26H0Y7S4 382 aa11□□□□□ -0.65
CHMP2B-201ENST00000263780 AHSA1O95433 338 aa11□□□□□ -0.65
CHMP2B-201ENST00000263780 NUDT14O95848 222 aa11□□□□□ -0.65
CHMP2B-201ENST00000263780 MPIG6BO95866 241 aa11□□□□□ -0.65
CHMP2B-201ENST00000263780 CHATP28329 748 aa11□□□□□ -0.65
CHMP2B-201ENST00000263780 CAMLGP49069 296 aa11□□□□□ -0.65
CHMP2B-201ENST00000263780 ARFRP1Q13795 201 aa11□□□□□ -0.65
CHMP2B-201ENST00000263780 ARL6IP1Q15041 203 aa11□□□□□ -0.65
CHMP2B-201ENST00000263780 PRTGQ2VWP7 1150 aa11□□□□□ -0.65
CHMP2B-201ENST00000263780 C1QL3Q5VWW1 255 aa11□□□□□ -0.65
CHMP2B-201ENST00000263780 RPUSD3Q6P087 351 aaKnown RBP11□□□□□ -0.65
CHMP2B-201ENST00000263780 GLIPR1L1Q6UWM5 242 aa11□□□□□ -0.65
CHMP2B-201ENST00000263780 OR13G1Q8NGZ3 307 aa11□□□□□ -0.65
CHMP2B-201ENST00000263780 SPPL3Q8TCT6 385 aa11□□□□□ -0.65
CHMP2B-201ENST00000263780 TMEM59Q9BXS4 323 aa11□□□□□ -0.65
CHMP2B-201ENST00000263780 RAB33BQ9H082 229 aa11□□□□□ -0.65
CHMP2B-201ENST00000263780 TUBD1Q9UJT1 453 aa11□□□□□ -0.65
CHMP2B-201ENST00000263780 CACNA1CQ13936 2221 aa10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 THBS4P35443 961 aa10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 SEC13P55735 322 aa10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 ZNF616Q08AN1 781 aa10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 NOGQ13253 232 aa10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 KIAA0141Q14154 515 aaPredicted RBP10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 ZNF761Q86XN6 746 aaPredicted RBP10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 FOXRED2Q8IWF2 684 aa10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 OR13C9Q8NGT0 318 aa10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 CD300LFQ8TDQ1 290 aa10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 ADAT3Q96EY9 351 aaPredicted RBP10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 PTGES2Q9H7Z7 377 aa10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 FAM206AQ9NX38 181 aa10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 FANCMQ8IYD8 2048 aa10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 TMED7-TICAM2A0A0A6YYA0 188 aa10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 A0A1W2PQD3 144 aa10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 C17orf105B2RV13 164 aa10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 E5RGE8 158 aa10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 HCRTR1O43613 425 aa10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 CDC14BO60729 498 aa10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 ZNF354AO60765 605 aaPredicted RBP10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 MPZL1O95297 269 aa10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 OR2C1O95371 312 aa10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 NSA2O95478 260 aaKnown RBP10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 TTRP02766 147 aa10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 CLPSP04118 112 aa10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 RPS2P15880 293 aaKnown RBP10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 PI3P19957 117 aa10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 GLRA1P23415 457 aa10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 ID4P47928 161 aa10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 DAP3P51398 398 aaKnown RBP10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 CSNK2A1P68400 391 aaPredicted RBP10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 SRSF5Q13243 272 aaKnown RBP10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 GPM6BQ13491 265 aa10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 ERV3-1Q14264 604 aa10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 CLINT1Q14677 625 aa10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 DNLZQ5SXM8 178 aa10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 COL13A1Q5TAT6 717 aaPredicted RBP10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 RTL6Q6ICC9 239 aa10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 OR2A2Q6IF42 318 aa10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 GKN2Q86XP6 184 aa10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 SGPP2Q8IWX5 399 aa10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 CSNK2A3Q8NEV1 391 aa10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 OR2I1PQ8NGU4 316 aa10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 PBOV1Q9GZY1 135 aa10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 MOB1AQ9H8S9 216 aa10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 FBRSQ9HAH7 460 aa10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 C19orf12Q9NSK7 152 aa10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 PARPBPQ9NWS1 579 aa10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 PLA2G2EQ9NZK7 142 aa10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 NSG2Q9Y328 171 aa10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 TMED3Q9Y3Q3 217 aa10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 CLDN16Q9Y5I7 305 aa10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 DOCK9Q9BZ29 2069 aa10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 KIF26BQ2KJY2 2108 aa10.99□□□□□ -0.65
CHMP2B-201ENST00000263780 SLC2A1P11166 492 aa10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 DCAF7P61962 342 aa10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 DEFB115Q30KQ5 88 aa10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 GPR157Q5UAW9 335 aa10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 C1orf53Q5VUE5 145 aa10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 AADACL3Q5VUY0 350 aa10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 PTCRAQ6ISU1 281 aaPredicted RBP10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 HEPN1Q6WQI6 88 aa10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 PNLDC1Q8NA58 520 aaKnown RBP10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 OR10H5Q8NGA6 315 aa10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 SGK3Q96BR1 496 aa10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 ZNF524Q96C55 264 aa10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 ZDHHC12Q96GR4 267 aa10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 ADOQ96SZ5 270 aa10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 NICN1Q9BSH3 213 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms