RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 HPSE2Q8WWQ2 592 aa17.71■□□□□ 0.43
HOXC13-201ENST00000243056 SLC6A7Q99884 636 aa17.71■□□□□ 0.43
HOXC13-201ENST00000243056 SLC5A7Q9GZV3 580 aa17.71■□□□□ 0.43
HOXC13-201ENST00000243056 TAF9BQ9HBM6 251 aa17.71■□□□□ 0.43
HOXC13-201ENST00000243056 ZCCHC3Q9NUD5 404 aaKnown RBP17.71■□□□□ 0.43
HOXC13-201ENST00000243056 HAO2Q9NYQ3 351 aa17.71■□□□□ 0.43
HOXC13-201ENST00000243056 AHSPQ9NZD4 102 aa17.71■□□□□ 0.43
HOXC13-201ENST00000243056 FARSAQ9Y285 508 aaKnown RBP17.71■□□□□ 0.43
HOXC13-201ENST00000243056 A0A1W2PR48 441 aa17.71■□□□□ 0.43
HOXC13-201ENST00000243056 HNF4GQ14541 408 aa17.71■□□□□ 0.43
HOXC13-201ENST00000243056 EBPQ15125 230 aaKnown RBP17.71■□□□□ 0.43
HOXC13-201ENST00000243056 AWAT2Q6E213 333 aa17.71■□□□□ 0.43
HOXC13-201ENST00000243056 OR51D1Q8NGF3 324 aa17.71■□□□□ 0.43
HOXC13-201ENST00000243056 NPRL2Q8WTW4 380 aa17.71■□□□□ 0.43
HOXC13-201ENST00000243056 PHB2Q99623 299 aa17.71■□□□□ 0.43
HOXC13-201ENST00000243056 ZNF318Q5VUA4 2279 aa17.71■□□□□ 0.43
HOXC13-201ENST00000243056 RAMP1O60894 148 aa17.7■□□□□ 0.42
HOXC13-201ENST00000243056 MAS1P04201 325 aa17.7■□□□□ 0.42
HOXC13-201ENST00000243056 SLC35G6P0C7Q6 338 aa17.7■□□□□ 0.42
HOXC13-201ENST00000243056 GLB1P16278 677 aa17.7■□□□□ 0.42
HOXC13-201ENST00000243056 ZNF28P17035 718 aa17.7■□□□□ 0.42
HOXC13-201ENST00000243056 FRKP42685 505 aaPredicted RBP17.7■□□□□ 0.42
HOXC13-201ENST00000243056 IL13RA1P78552 427 aa17.7■□□□□ 0.42
HOXC13-201ENST00000243056 DCAF10Q5QP82 559 aa17.7■□□□□ 0.42
HOXC13-201ENST00000243056 DMRTA1Q5VZB9 504 aa17.7■□□□□ 0.42
HOXC13-201ENST00000243056 OR2L13Q8N349 312 aa17.7■□□□□ 0.42
HOXC13-201ENST00000243056 JAGN1Q8N5M9 183 aa17.7■□□□□ 0.42
HOXC13-201ENST00000243056 TMEM229BQ8NBD8 167 aa17.7■□□□□ 0.42
HOXC13-201ENST00000243056 RCBTB1Q8NDN9 531 aa17.7■□□□□ 0.42
HOXC13-201ENST00000243056 TM4SF19Q96DZ7 209 aa17.7■□□□□ 0.42
HOXC13-201ENST00000243056 ZPBPQ9BS86 351 aa17.7■□□□□ 0.42
HOXC13-201ENST00000243056 ZFHX2Q9C0A1 2572 aaPredicted RBP17.7■□□□□ 0.42
HOXC13-201ENST00000243056 LILRA5A6NI73 299 aa17.7■□□□□ 0.42
HOXC13-201ENST00000243056 RIIAD1A6NNX1 92 aa17.7■□□□□ 0.42
HOXC13-201ENST00000243056 LDLRAD4O15165 306 aa17.7■□□□□ 0.42
HOXC13-201ENST00000243056 NUDT21O43809 227 aaKnown RBP17.7■□□□□ 0.42
HOXC13-201ENST00000243056 MPLP40238 635 aa17.7■□□□□ 0.42
HOXC13-201ENST00000243056 KHKP50053 298 aa17.7■□□□□ 0.42
HOXC13-201ENST00000243056 ACTBP60709 375 aa17.7■□□□□ 0.42
HOXC13-201ENST00000243056 EIF5AP63241 154 aaKnown RBP17.7■□□□□ 0.42
HOXC13-201ENST00000243056 ACTG1P63261 375 aa17.7■□□□□ 0.42
HOXC13-201ENST00000243056 TOMM34Q15785 309 aaPredicted RBP17.7■□□□□ 0.42
HOXC13-201ENST00000243056 TMEM35AQ53FP2 167 aa17.7■□□□□ 0.42
HOXC13-201ENST00000243056 CD163Q86VB7 1156 aa17.7■□□□□ 0.42
HOXC13-201ENST00000243056 OR4N5Q8IXE1 308 aa17.7■□□□□ 0.42
HOXC13-201ENST00000243056 CSNK1A1LQ8N752 337 aa17.7■□□□□ 0.42
HOXC13-201ENST00000243056 SLC2A12Q8TD20 617 aa17.7■□□□□ 0.42
HOXC13-201ENST00000243056 RERGQ96A58 199 aaPredicted RBP17.7■□□□□ 0.42
HOXC13-201ENST00000243056 MRGPRFQ96AM1 343 aa17.7■□□□□ 0.42
HOXC13-201ENST00000243056 GAL3ST4Q96RP7 486 aa17.7■□□□□ 0.42
HOXC13-201ENST00000243056 CD180Q99467 661 aa17.7■□□□□ 0.42
HOXC13-201ENST00000243056 CCDC3Q9BQI4 270 aa17.7■□□□□ 0.42
HOXC13-201ENST00000243056 G6PC3Q9BUM1 346 aa17.7■□□□□ 0.42
HOXC13-201ENST00000243056 M0R143 59 aa17.69■□□□□ 0.42
HOXC13-201ENST00000243056 SPARCP09486 303 aa17.69■□□□□ 0.42
HOXC13-201ENST00000243056 TRGC1P0CF51 173 aa17.69■□□□□ 0.42
HOXC13-201ENST00000243056 GLO1Q04760 184 aa17.69■□□□□ 0.42
HOXC13-201ENST00000243056 DUSP2Q05923 314 aa17.69■□□□□ 0.42
HOXC13-201ENST00000243056 ELOBQ15370 118 aa17.69■□□□□ 0.42
HOXC13-201ENST00000243056 MIDNQ504T8 468 aa17.69■□□□□ 0.42
HOXC13-201ENST00000243056 SEH1LQ96EE3 360 aa17.69■□□□□ 0.42
HOXC13-201ENST00000243056 TMED7Q9Y3B3 224 aa17.69■□□□□ 0.42
HOXC13-201ENST00000243056 TRAV8-7A0A075B6U6 113 aa17.69■□□□□ 0.42
HOXC13-201ENST00000243056 TGIF2-C20orf24A0A0A6YYL0 155 aa17.69■□□□□ 0.42
HOXC13-201ENST00000243056 ERAL1O75616 437 aaKnown RBP17.69■□□□□ 0.42
HOXC13-201ENST00000243056 RUNX2Q13950 521 aa17.69■□□□□ 0.42
HOXC13-201ENST00000243056 LASP1Q14847 261 aaKnown RBP17.69■□□□□ 0.42
HOXC13-201ENST00000243056 WDR88Q6ZMY6 472 aa17.69■□□□□ 0.42
HOXC13-201ENST00000243056 ZNF227Q86WZ6 799 aa17.69■□□□□ 0.42
HOXC13-201ENST00000243056 SLC35F2Q8IXU6 374 aa17.69■□□□□ 0.42
HOXC13-201ENST00000243056 ABHD5Q8WTS1 349 aa17.69■□□□□ 0.42
HOXC13-201ENST00000243056 EIF5A2Q9GZV4 153 aaKnown RBP17.69■□□□□ 0.42
HOXC13-201ENST00000243056 CBLN4Q9NTU7 201 aa17.69■□□□□ 0.42
HOXC13-201ENST00000243056 RIF1Q5UIP0 2472 aaKnown RBP17.68■□□□□ 0.42
HOXC13-201ENST00000243056 TSPAN15O95858 294 aa17.68■□□□□ 0.42
HOXC13-201ENST00000243056 ID2Q02363 134 aa17.68■□□□□ 0.42
HOXC13-201ENST00000243056 PEAR1Q5VY43 1037 aaPredicted RBP17.68■□□□□ 0.42
HOXC13-201ENST00000243056 RNF44Q7L0R7 432 aa17.68■□□□□ 0.42
HOXC13-201ENST00000243056 OR4C6Q8NH72 309 aa17.68■□□□□ 0.42
HOXC13-201ENST00000243056 ZNF563Q8TA94 476 aa17.68■□□□□ 0.42
HOXC13-201ENST00000243056 FRZBQ92765 325 aa17.68■□□□□ 0.42
HOXC13-201ENST00000243056 RNF166Q96A37 237 aaPredicted RBP17.68■□□□□ 0.42
HOXC13-201ENST00000243056 ZNF223Q9UK11 482 aaPredicted RBP17.68■□□□□ 0.42
HOXC13-201ENST00000243056 PUS1Q9Y606 427 aaKnown RBP eCLIP17.68■□□□□ 0.42
HOXC13-201ENST00000243056 A0A087WZY1 265 aa17.68■□□□□ 0.42
HOXC13-201ENST00000243056 OR13C7P0DN81 318 aa17.68■□□□□ 0.42
HOXC13-201ENST00000243056 ERVFRD-1P60508 538 aa17.68■□□□□ 0.42
HOXC13-201ENST00000243056 SKP1P63208 163 aa17.68■□□□□ 0.42
HOXC13-201ENST00000243056 OR9A4Q8NGU2 314 aa17.68■□□□□ 0.42
HOXC13-201ENST00000243056 RPS4Y2Q8TD47 263 aa17.68■□□□□ 0.42
HOXC13-201ENST00000243056 C16orf58Q96GQ5 468 aa17.68■□□□□ 0.42
HOXC13-201ENST00000243056 GNRHR2Q96P88 292 aa17.68■□□□□ 0.42
HOXC13-201ENST00000243056 AQP10Q96PS8 301 aa17.68■□□□□ 0.42
HOXC13-201ENST00000243056 URGCP-MRPS24S4R325 110 aa17.68■□□□□ 0.42
HOXC13-201ENST00000243056 PRR32B1ATL7 298 aa17.67■□□□□ 0.42
HOXC13-201ENST00000243056 NME2P1O60361 137 aa17.67■□□□□ 0.42
HOXC13-201ENST00000243056 GDF9O60383 454 aa17.67■□□□□ 0.42
HOXC13-201ENST00000243056 AIFM1O95831 613 aa17.67■□□□□ 0.42
HOXC13-201ENST00000243056 OR2T7P0C7T2 308 aa17.67■□□□□ 0.42
HOXC13-201ENST00000243056 SSBP1Q04837 148 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms