RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 C5orf63A6NC05 138 aa10.98□□□□□ -0.65
NUP88-201ENST00000225696 NPIPA5E9PKD4 350 aa10.98□□□□□ -0.65
NUP88-201ENST00000225696 HOXB5P09067 269 aa10.98□□□□□ -0.65
NUP88-201ENST00000225696 ZNF17P17021 662 aa10.98□□□□□ -0.65
NUP88-201ENST00000225696 CDAP32320 146 aa10.98□□□□□ -0.65
NUP88-201ENST00000225696 CAV2P51636 162 aa10.98□□□□□ -0.65
NUP88-201ENST00000225696 DLX2Q07687 328 aaPredicted RBP10.98□□□□□ -0.65
NUP88-201ENST00000225696 NSDHLQ15738 373 aa10.98□□□□□ -0.65
NUP88-201ENST00000225696 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.98□□□□□ -0.65
NUP88-201ENST00000225696 AADACL3Q5VUY0 350 aa10.98□□□□□ -0.65
NUP88-201ENST00000225696 ZNF529Q6P280 563 aa10.98□□□□□ -0.65
NUP88-201ENST00000225696 PRSS54Q6PEW0 395 aa10.98□□□□□ -0.65
NUP88-201ENST00000225696 LANCL3Q6ZV70 420 aa10.98□□□□□ -0.65
NUP88-201ENST00000225696 SMIM8Q96KF7 97 aa10.98□□□□□ -0.65
NUP88-201ENST00000225696 NPIPA1Q9UND3 350 aa10.98□□□□□ -0.65
NUP88-201ENST00000225696 VDAC3Q9Y277 283 aa10.98□□□□□ -0.65
NUP88-201ENST00000225696 ASCC3Q8N3C0 2202 aaKnown RBP10.98□□□□□ -0.65
NUP88-201ENST00000225696 ARPC4-TTLL3A0A0A6YYG9 625 aa10.97□□□□□ -0.65
NUP88-201ENST00000225696 RNASEK-C17orf49H0YIS7 233 aa10.97□□□□□ -0.65
NUP88-201ENST00000225696 FBXO24O75426 580 aa10.97□□□□□ -0.65
NUP88-201ENST00000225696 RPS2P15880 293 aaKnown RBP10.97□□□□□ -0.65
NUP88-201ENST00000225696 CD80P33681 288 aa10.97□□□□□ -0.65
NUP88-201ENST00000225696 SLC6A9P48067 706 aa10.97□□□□□ -0.65
NUP88-201ENST00000225696 F2RL1P55085 397 aa10.97□□□□□ -0.65
NUP88-201ENST00000225696 GPR85P60893 370 aa10.97□□□□□ -0.65
NUP88-201ENST00000225696 S100A10P60903 97 aa10.97□□□□□ -0.65
NUP88-201ENST00000225696 HLA-DQA1Q5Y7H0 255 aa10.97□□□□□ -0.65
NUP88-201ENST00000225696 CLEC9AQ6UXN8 241 aa10.97□□□□□ -0.65
NUP88-201ENST00000225696 DEFB119Q8N690 84 aa10.97□□□□□ -0.65
NUP88-201ENST00000225696 THAP3Q8WTV1 239 aaPredicted RBP10.97□□□□□ -0.65
NUP88-201ENST00000225696 RAB3CQ96E17 227 aa10.97□□□□□ -0.65
NUP88-201ENST00000225696 CLCC1Q96S66 551 aa10.97□□□□□ -0.65
NUP88-201ENST00000225696 UQCC2Q9BRT2 126 aa10.97□□□□□ -0.65
NUP88-201ENST00000225696 ST6GALNAC5Q9BVH7 336 aa10.97□□□□□ -0.65
NUP88-201ENST00000225696 SLC26A1Q9H2B4 701 aa10.97□□□□□ -0.65
NUP88-201ENST00000225696 CUTCQ9NTM9 273 aa10.97□□□□□ -0.65
NUP88-201ENST00000225696 VPS13AQ96RL7 3174 aa10.97□□□□□ -0.65
NUP88-201ENST00000225696 UNC13CQ8NB66 2214 aa10.97□□□□□ -0.65
NUP88-201ENST00000225696 A0A1W2PQD3 144 aa10.97□□□□□ -0.65
NUP88-201ENST00000225696 FAM157AC9JC47 383 aa10.97□□□□□ -0.65
NUP88-201ENST00000225696 E9PLN8 166 aa10.97□□□□□ -0.65
NUP88-201ENST00000225696 H3BMH7 237 aa10.97□□□□□ -0.65
NUP88-201ENST00000225696 H3BML4 177 aa10.97□□□□□ -0.65
NUP88-201ENST00000225696 CDC14BO60729 498 aa10.97□□□□□ -0.65
NUP88-201ENST00000225696 MED6O75586 246 aa10.97□□□□□ -0.65
NUP88-201ENST00000225696 CSTBP04080 98 aaKnown RBP10.97□□□□□ -0.65
NUP88-201ENST00000225696 FCGR3AP08637 254 aa10.97□□□□□ -0.65
NUP88-201ENST00000225696 LYL1P12980 280 aa10.97□□□□□ -0.65
NUP88-201ENST00000225696 HIST1H1DP16402 221 aaKnown RBP10.97□□□□□ -0.65
NUP88-201ENST00000225696 HSF1Q00613 529 aa10.97□□□□□ -0.65
NUP88-201ENST00000225696 HGFACQ04756 655 aa10.97□□□□□ -0.65
NUP88-201ENST00000225696 IL15RAQ13261 267 aa10.97□□□□□ -0.65
NUP88-201ENST00000225696 DHRS11Q6UWP2 260 aa10.97□□□□□ -0.65
NUP88-201ENST00000225696 IL34Q6ZMJ4 242 aa10.97□□□□□ -0.65
NUP88-201ENST00000225696 SLC16A13Q7RTY0 426 aa10.97□□□□□ -0.65
NUP88-201ENST00000225696 C1QL2Q7Z5L3 287 aa10.97□□□□□ -0.65
NUP88-201ENST00000225696 POC1AQ8NBT0 407 aa10.97□□□□□ -0.65
NUP88-201ENST00000225696 OR5D18Q8NGL1 313 aa10.97□□□□□ -0.65
NUP88-201ENST00000225696 OR5D14Q8NGL3 314 aa10.97□□□□□ -0.65
NUP88-201ENST00000225696 RLN3Q8WXF3 142 aa10.97□□□□□ -0.65
NUP88-201ENST00000225696 AQP10Q96PS8 301 aa10.97□□□□□ -0.65
NUP88-201ENST00000225696 METTL8Q9H825 291 aaKnown RBP10.97□□□□□ -0.65
NUP88-201ENST00000225696 MRPS28Q9Y2Q9 187 aaKnown RBP10.97□□□□□ -0.65
NUP88-201ENST00000225696 PIAS3Q9Y6X2 628 aa10.97□□□□□ -0.65
NUP88-201ENST00000225696 FRYLO94915 3013 aa10.97□□□□□ -0.65
NUP88-201ENST00000225696 A0A1W2PPE3 182 aa10.96□□□□□ -0.65
NUP88-201ENST00000225696 C10orf142B7Z368 130 aa10.96□□□□□ -0.65
NUP88-201ENST00000225696 HEXAP06865 529 aa10.96□□□□□ -0.65
NUP88-201ENST00000225696 OR8U9P0C7N5 309 aa10.96□□□□□ -0.65
NUP88-201ENST00000225696 P2RY4P51582 365 aa10.96□□□□□ -0.65
NUP88-201ENST00000225696 BIDP55957 195 aa10.96□□□□□ -0.65
NUP88-201ENST00000225696 C1orf189Q5VU69 101 aa10.96□□□□□ -0.65
NUP88-201ENST00000225696 COMMD2Q86X83 199 aa10.96□□□□□ -0.65
NUP88-201ENST00000225696 DTX1Q86Y01 620 aa10.96□□□□□ -0.65
NUP88-201ENST00000225696 ZNF248Q8NDW4 579 aa10.96□□□□□ -0.65
NUP88-201ENST00000225696 OR8U1Q8NH10 309 aa10.96□□□□□ -0.65
NUP88-201ENST00000225696 NANPQ8TBE9 248 aa10.96□□□□□ -0.65
NUP88-201ENST00000225696 OIT3Q8WWZ8 545 aa10.96□□□□□ -0.65
NUP88-201ENST00000225696 NAA11Q9BSU3 229 aaPredicted RBP10.96□□□□□ -0.65
NUP88-201ENST00000225696 ZNF304Q9HCX3 659 aa10.96□□□□□ -0.65
NUP88-201ENST00000225696 RAB18Q9NP72 206 aa10.96□□□□□ -0.65
NUP88-201ENST00000225696 LHFPL6Q9Y693 200 aa10.96□□□□□ -0.65
NUP88-201ENST00000225696 LINC00587B1AMM8 73 aa10.96□□□□□ -0.66
NUP88-201ENST00000225696 PRSS44E7EML9 344 aa10.96□□□□□ -0.66
NUP88-201ENST00000225696 EFNA2O43921 213 aa10.96□□□□□ -0.66
NUP88-201ENST00000225696 CD5P06127 495 aa10.96□□□□□ -0.66
NUP88-201ENST00000225696 SFTPBP07988 381 aa10.96□□□□□ -0.66
NUP88-201ENST00000225696 DHPSP49366 369 aaPredicted RBP10.96□□□□□ -0.66
NUP88-201ENST00000225696 FBXW4P57775 412 aa10.96□□□□□ -0.66
NUP88-201ENST00000225696 TAS2R31P59538 309 aa10.96□□□□□ -0.66
NUP88-201ENST00000225696 CYCSP99999 105 aaKnown RBP10.96□□□□□ -0.66
NUP88-201ENST00000225696 TLE3Q04726 772 aa10.96□□□□□ -0.66
NUP88-201ENST00000225696 PEA15Q15121 130 aa10.96□□□□□ -0.66
NUP88-201ENST00000225696 RSPO4Q2I0M5 234 aaPredicted RBP10.96□□□□□ -0.66
NUP88-201ENST00000225696 DEGS2Q6QHC5 323 aa10.96□□□□□ -0.66
NUP88-201ENST00000225696 H1FNTQ75WM6 255 aaPredicted RBP10.96□□□□□ -0.66
NUP88-201ENST00000225696 ABHD12BQ7Z5M8 362 aaPredicted RBP10.96□□□□□ -0.66
NUP88-201ENST00000225696 AKR1E2Q96JD6 320 aa10.96□□□□□ -0.66
NUP88-201ENST00000225696 FAM71F1Q96KD3 344 aaPredicted RBP10.96□□□□□ -0.66
NUP88-201ENST00000225696 NECAB3Q96P71 396 aaPredicted RBP10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms