RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Ablim1Q8K4G5 861 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Clec2fQ8VI21 196 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Gm15737D3YZR0 106 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 AcheP21836 614 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Nkx2-1P50220 372 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Grxcr2Q3TYR5 254 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Smim37Q8BT35 56 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Banf2Q8BVR0 90 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Q8C4P0 716 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Rab38Q8QZZ8 211 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr770Q8VGC2 311 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr639Q8VGY8 316 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 PolmQ9JIW4 496 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Vmn1r82A0A087WRV1 305 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Gm5218F6YH22 154 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Hormad2Q5SQP1 306 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 SrmQ64674 302 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 MrgprdQ91ZB8 321 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Gm11168J3QN50 228 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 FlgP11088 336 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 DaoP18894 345 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Ifna13Q80SU4 189 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Q8C4X7 151 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Pqlc3Q8C6U2 202 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Slc35a4Q9D321 324 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Hyal6Q9D4E9 494 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Mnx1Q9QZW9 404 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Cxcl15Q9WVL7 167 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Dock5B2RY04 1868 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Polr2aP08775 1970 aaKnown RBP10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Cks2P56390 79 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Gm2aQ60648 193 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Cox8aQ64445 69 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Fbxo27Q6DIA9 280 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Q8BTG6 205 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr1431Q8VF59 312 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Q9CWB7 115 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Aig1Q9D8B1 262 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Adam21Q9JI76 729 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Lamb2Q61292 1799 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Slc35d1A2AKQ0 355 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Vmn1r168K7N6B6 309 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Tesk1O70146 627 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Kcnk4O88454 398 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Hsd3b1P24815 373 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Ext1P97464 746 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Tmprss11cQ1JRP2 431 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Ctxn2Q3URE8 81 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Klri2Q5DT36 248 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 PhyhiplQ8BGT8 375 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Zfp286Q8C0E6 519 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 QprtQ91X91 299 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Ppp6cQ9CQR6 305 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Dmac2Q9D7K5 258 aaKnown RBP10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Cacna1iE9Q7P2 2199 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Gm5475D3YV11 175 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Cd79aP11911 220 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Paqr8Q80ZE5 354 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Fam120cQ8C3F2 1091 aaKnown RBP10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Vmn1r72Q8K3N7 306 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Sla2Q8R4L0 259 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 NgbQ9ER97 151 aa10.97□□□□□ -0.65
Trim56-201ENSMUST00000054384 Atg2bQ80XK6 2075 aa10.96□□□□□ -0.65
Trim56-201ENSMUST00000054384 Hrh3P58406 445 aa10.96□□□□□ -0.65
Trim56-201ENSMUST00000054384 Lin28bQ45KJ6 247 aaKnown RBP10.96□□□□□ -0.65
Trim56-201ENSMUST00000054384 Htr1aQ64264 421 aa10.96□□□□□ -0.65
Trim56-201ENSMUST00000054384 4930451G09RikQ8C5G4 195 aa10.96□□□□□ -0.65
Trim56-201ENSMUST00000054384 Vmn1r208Q8R275 308 aa10.96□□□□□ -0.65
Trim56-201ENSMUST00000054384 Vmn1r75Q8R289 305 aa10.96□□□□□ -0.65
Trim56-201ENSMUST00000054384 Tmem19Q91W52 336 aa10.96□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr1507Q0VEP0 313 aa10.96□□□□□ -0.65
Trim56-201ENSMUST00000054384 Clec2dQ91V08 207 aa10.96□□□□□ -0.65
Trim56-201ENSMUST00000054384 Smim14Q91VT8 99 aa10.96□□□□□ -0.65
Trim56-201ENSMUST00000054384 Gins3Q9CY94 216 aa10.96□□□□□ -0.65
Trim56-201ENSMUST00000054384 Mrpl13Q9D1P0 178 aaKnown RBP10.96□□□□□ -0.65
Trim56-201ENSMUST00000054384 Gnpnat1Q9JK38 184 aa10.96□□□□□ -0.65
Trim56-201ENSMUST00000054384 Gm17087V9GXQ2 156 aa10.96□□□□□ -0.65
Trim56-201ENSMUST00000054384 Col2a1P28481 1487 aa10.96□□□□□ -0.65
Trim56-201ENSMUST00000054384 Trav10nA0A075B622 114 aa10.96□□□□□ -0.65
Trim56-201ENSMUST00000054384 Trav10A0A075B642 114 aa10.96□□□□□ -0.65
Trim56-201ENSMUST00000054384 Esp16A8R0U9 85 aa10.96□□□□□ -0.65
Trim56-201ENSMUST00000054384 Vmn1r137D3YTY1 307 aa10.96□□□□□ -0.65
Trim56-201ENSMUST00000054384 Vmn1r143E9PUW9 307 aa10.96□□□□□ -0.65
Trim56-201ENSMUST00000054384 Vmn1r157E9Q069 297 aa10.96□□□□□ -0.65
Trim56-201ENSMUST00000054384 Vmn1r139E9Q8L6 297 aa10.96□□□□□ -0.65
Trim56-201ENSMUST00000054384 Cyp2d37-psF6YKB5 150 aa10.96□□□□□ -0.65
Trim56-201ENSMUST00000054384 Vmn1r112G3UY48 297 aa10.96□□□□□ -0.65
Trim56-201ENSMUST00000054384 Vmn1r135K9J7G0 307 aa10.96□□□□□ -0.65
Trim56-201ENSMUST00000054384 Gm28044L7N1X0 119 aa10.96□□□□□ -0.65
Trim56-201ENSMUST00000054384 Vmn1r125L7N227 307 aa10.96□□□□□ -0.65
Trim56-201ENSMUST00000054384 Vmn1r116L7N2A6 307 aa10.96□□□□□ -0.65
Trim56-201ENSMUST00000054384 St8sia2O35696 375 aa10.96□□□□□ -0.65
Trim56-201ENSMUST00000054384 ErgP81270 486 aa10.96□□□□□ -0.65
Trim56-201ENSMUST00000054384 Agpat4Q8K4X7 378 aa10.96□□□□□ -0.65
Trim56-201ENSMUST00000054384 Olfr114Q923Q8 312 aa10.96□□□□□ -0.65
Trim56-201ENSMUST00000054384 Vmn1r100Q9EPS5 307 aa10.96□□□□□ -0.65
Trim56-201ENSMUST00000054384 Gm14288E9Q9W0 88 aa10.96□□□□□ -0.65
Trim56-201ENSMUST00000054384 CamlgP49070 294 aa10.96□□□□□ -0.65
Trim56-201ENSMUST00000054384 Clec7aQ6QLQ4 244 aa10.96□□□□□ -0.65
Trim56-201ENSMUST00000054384 Ovch2Q7M761 609 aa10.96□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 79.8 ms