RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Cib3Q0P523 160 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 G6pc3Q6NSQ9 346 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Olfr1386Q7TQT0 309 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Orai1Q8BWG9 304 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 NagkQ9QZ08 343 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Six6Q9QZ28 246 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Adam26aQ9R158 697 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Mast2Q60592 1734 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Rhox2bA2A447 191 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Rhox2cA2AWL9 191 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Gm14862B1AV28 81 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 RfngO09009 332 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Drd3P30728 446 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 MidnQ3TPJ7 465 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Chst8Q8BQ86 417 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Abhd3Q91ZH7 411 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Lancl2Q9JJK2 450 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Vmn1r82A0A087WRV1 305 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 DytnA2CI98 653 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Slc6a9P28571 692 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Dtd2Q8BHA3 168 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Fam234bQ8BYI8 624 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Alg12Q8VDB2 486 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Ltbp2O08999 1813 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Olfr587-ps1A0A1B0GSS1 159 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Vsig10lD3YZF7 868 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Mfsd4b5E9PYY6 479 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Vmn1r120K7N6J6 305 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Nkx2-1P50220 372 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Q9CQ90 155 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Nat8Q9JIY7 227 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Sema7aQ9QUR8 664 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Zfp961E9Q4R5 444 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Pif1Q80SX8 650 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 NosipQ9D6T0 301 aaKnown RBP15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Hapln2Q9ESM3 341 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Klrc1Q9Z202 244 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Tcrg-V3A0A0G2JEW2 117 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Olfr1326-ps1A0A140T8J7 311 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Mmp1bQ9EPL6 463 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Asb1Q9WV74 336 aa15.25■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Serf1O88892 62 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Adamts1P97857 968 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Vmn1r72Q8K3N7 306 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Usp3Q91W36 520 aaKnown RBP15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Prss1Q9Z1R9 246 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Il17dA0A0B4J1G4 205 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Zfp934K7N6H3 473 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Olfr1513L7N457 313 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Olfr648Q8VG19 316 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 St3gal6Q8VIB3 329 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Q922R1 422 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Trabd2bB1ATG9 517 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Vmn2r16E9Q025 850 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Gpr31F8VQN3 319 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Gpr83P30731 423 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Prickle3Q80VL3 624 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Egln2Q91YE2 419 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Lrrc51Q9DAK8 192 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 AU041133A0A0J9YVH3 498 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Tnfrsf14A0A1W2P7D5 276 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Mmp27D3YV89 551 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Gm42791D3YYB5 209 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Vmn1r168K7N6B6 309 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Vmn1r80L7N1Z3 308 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 VegfdP97946 358 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Rhox4dQ2MDG0 205 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Rhox4eQ504P9 205 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 DdiasQ6NZG4 898 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Aph1aQ8BVF7 265 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Pars2Q8CFI5 475 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Olfr77Q8VEY9 312 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Rhox4bQ9JI43 205 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Olfr1205A2ATJ7 307 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 CatsperdE9Q9F6 805 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Gm11009F7CWA7 138 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Zfp39Q02525 718 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Fam117bQ3U3E2 584 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Tnfaip3Q60769 775 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Olfr24Q8VFM9 313 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 NtpcrQ9CQA9 190 aaKnown RBP15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Art4Q9CRA0 300 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Cdc7Q9Z0H0 564 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Pax6P63015 422 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Olfr1229Q7TQZ9 311 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Cbr3Q8K354 277 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 B3gnt9Q8VI16 399 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Mrm1Q99J25 320 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Gm43951A0A0N4SUT6 962 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Il1r1P13504 576 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Hoxc5P32043 222 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 AstlQ6HA09 435 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Tp53inp2Q8CFU8 221 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Scgb2b27Q8R1E9 112 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Olfr993Q8VF75 314 aa15.24■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Cnih1O35372 144 aa15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Pcsk4P29121 655 aa15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Havcr1Q5QNS5 305 aa15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Sqstm1Q64337 442 aaKnown RBP15.23■□□□□ 0.03
Ccdc88a-201ENSMUST00000040182 Krba1Q6NXZ1 1043 aa15.23■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 152.2 ms