RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Olfr889L7N1Y6 314 aa14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 Vmn2r51L7N215 852 aa14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 Gm4778L7N229 365 aa14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 Slc16a7O70451 484 aa14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 Bbs12Q5SUD9 708 aa14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 Tbccd1Q640P7 552 aa14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 Hist2h2abQ64522 130 aa14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 Zfp933Q6PEE4 468 aa14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 PigvQ7TPN3 493 aa14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 Gfod2Q9CYH5 385 aa14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 D17h6s53eQ9Z1R4 293 aa14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 Gm21117A0A087WPJ9 222 aa14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 Gm20820A0A087WPP3 222 aa14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 Gm20937A0A087WQA3 222 aa14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 Gm21258A0A087WQC7 222 aa14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 Gm21095A0A087WR14 222 aa14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 Gm20824A0A087WS97 222 aa14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 Gm29866A0A0A6YX04 222 aa14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 Gm5788A0A1Y7VK80 144 aa14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 Bet1O35623 118 aa14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 Cxcl12P40224 93 aa14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 Efnb1P52795 345 aa14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 Lgals3bpQ07797 577 aa14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 Gpr160Q3U3F9 336 aa14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 Drd1Q61616 446 aa14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 Slc25a47Q6IS41 310 aa14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 Tas2r136Q7TQA8 305 aa14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 Olfr884Q7TRE1 309 aa14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 Ube3dQ8BX13 368 aa14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 PigmQ8C2R7 423 aa14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 Inpp5kQ8C5L6 468 aa14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 Angptl8Q8R1L8 198 aa14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 Syt9Q9R0N9 491 aa14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 Cabin1G3X8Q1 2187 aaKnown RBP14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 FancmQ8BGE5 2021 aa14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 Iglc4A0A0G2JEK5 104 aa14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 Ear3O35290 156 aa14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 Olfr1222Q7TR02 311 aa14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 Lrrc75aQ7TSF4 339 aa14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 Olfr1132Q8VG97 308 aa14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 Glipr2Q9CYL5 154 aa14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 Tssk4Q9D411 328 aa14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 Ca13Q9D6N1 262 aa14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 Med8Q9D7W5 268 aa14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 Sec61a2Q9JLR1 476 aa14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 Csnk1eQ9JMK2 416 aaKnown RBP14.6□□□□□ -0.07
Trim28-201ENSMUST00000005705 Vmn2r41E9Q5C7 852 aa14.59□□□□□ -0.07
Trim28-201ENSMUST00000005705 Vmn2r48E9Q5D8 855 aa14.59□□□□□ -0.07
Trim28-201ENSMUST00000005705 Vmn2r40F6W043 852 aa14.59□□□□□ -0.07
Trim28-201ENSMUST00000005705 Gm2056J3QQ02 144 aa14.59□□□□□ -0.07
Trim28-201ENSMUST00000005705 Vmn2r36K7N741 852 aa14.59□□□□□ -0.07
Trim28-201ENSMUST00000005705 Sod2P09671 222 aa14.59□□□□□ -0.07
Trim28-201ENSMUST00000005705 Nkx2-2P42586 273 aa14.59□□□□□ -0.07
Trim28-201ENSMUST00000005705 Stx4P70452 298 aa14.59□□□□□ -0.07
Trim28-201ENSMUST00000005705 SlbpP97440 275 aaKnown RBP14.59□□□□□ -0.07
Trim28-201ENSMUST00000005705 Lemd1Q14C37 129 aa14.59□□□□□ -0.07
Trim28-201ENSMUST00000005705 Defb25Q30KN8 71 aa14.59□□□□□ -0.07
Trim28-201ENSMUST00000005705 LipnQ3U4B4 400 aa14.59□□□□□ -0.07
Trim28-201ENSMUST00000005705 Nufip2Q5F2E7 692 aaKnown RBP14.59□□□□□ -0.07
Trim28-201ENSMUST00000005705 Map3k3Q61084 626 aa14.59□□□□□ -0.07
Trim28-201ENSMUST00000005705 Olfr1061Q7TR72 313 aa14.59□□□□□ -0.07
Trim28-201ENSMUST00000005705 Clec4a1Q80UI7 245 aa14.59□□□□□ -0.07
Trim28-201ENSMUST00000005705 Vmn1r28Q8R2C9 302 aa14.59□□□□□ -0.07
Trim28-201ENSMUST00000005705 Abhd17aQ99JW1 310 aa14.59□□□□□ -0.07
Trim28-201ENSMUST00000005705 Eif2b1Q99LC8 305 aa14.59□□□□□ -0.07
Trim28-201ENSMUST00000005705 Srxn1Q9D975 136 aa14.59□□□□□ -0.07
Trim28-201ENSMUST00000005705 A0A1L1SV24 88 aa14.59□□□□□ -0.07
Trim28-201ENSMUST00000005705 Gm15821A6X8J8 139 aa14.59□□□□□ -0.07
Trim28-201ENSMUST00000005705 Olfr747E9PXH6 313 aa14.59□□□□□ -0.07
Trim28-201ENSMUST00000005705 Olfr749E9Q438 313 aa14.59□□□□□ -0.07
Trim28-201ENSMUST00000005705 Mettl7a3G3X9G9 244 aa14.59□□□□□ -0.07
Trim28-201ENSMUST00000005705 Olfr738L7N1X7 311 aa14.59□□□□□ -0.07
Trim28-201ENSMUST00000005705 Il5P04401 133 aa14.59□□□□□ -0.07
Trim28-201ENSMUST00000005705 Hmgn2P09602 90 aa14.59□□□□□ -0.07
Trim28-201ENSMUST00000005705 HexaP29416 528 aa14.59□□□□□ -0.07
Trim28-201ENSMUST00000005705 PdgfbP31240 241 aa14.59□□□□□ -0.07
Trim28-201ENSMUST00000005705 Rhox4fQ2MDF8 205 aa14.59□□□□□ -0.07
Trim28-201ENSMUST00000005705 Rhox4cQ2MDG1 205 aa14.59□□□□□ -0.07
Trim28-201ENSMUST00000005705 Gm7534Q3UU21 679 aa14.59□□□□□ -0.07
Trim28-201ENSMUST00000005705 Kcnc3Q63959 769 aa14.59□□□□□ -0.07
Trim28-201ENSMUST00000005705 Olfr1321Q7TQW4 319 aa14.59□□□□□ -0.07
Trim28-201ENSMUST00000005705 Rbm48Q8K2X2 371 aa14.59□□□□□ -0.07
Trim28-201ENSMUST00000005705 Vmn1r17Q8R2D8 303 aa14.59□□□□□ -0.07
Trim28-201ENSMUST00000005705 Rnf113a1Q8R3P8 341 aa14.59□□□□□ -0.07
Trim28-201ENSMUST00000005705 Serpinb1bQ8VHP7 382 aa14.59□□□□□ -0.07
Trim28-201ENSMUST00000005705 Rhox4aQ9D3I8 205 aa14.59□□□□□ -0.07
Trim28-201ENSMUST00000005705 Lrrc51Q9DAK8 192 aa14.59□□□□□ -0.07
Trim28-201ENSMUST00000005705 Tmem25Q9DCF1 365 aa14.59□□□□□ -0.07
Trim28-201ENSMUST00000005705 Gstk1Q9DCM2 226 aa14.59□□□□□ -0.07
Trim28-201ENSMUST00000005705 Qtrt1Q9JMA2 403 aa14.59□□□□□ -0.07
Trim28-201ENSMUST00000005705 Gm20911A0A087WSS0 222 aa14.58□□□□□ -0.07
Trim28-201ENSMUST00000005705 Gm5519D3Z175 170 aa14.58□□□□□ -0.07
Trim28-201ENSMUST00000005705 Lipo5F6QKH6 233 aa14.58□□□□□ -0.07
Trim28-201ENSMUST00000005705 Vmn1r94K7N6X3 305 aa14.58□□□□□ -0.07
Trim28-201ENSMUST00000005705 PkiaP63248 76 aa14.58□□□□□ -0.07
Trim28-201ENSMUST00000005705 Zer1Q80ZJ6 779 aa14.58□□□□□ -0.07
Trim28-201ENSMUST00000005705 Nhlrc2Q8BZW8 725 aa14.58□□□□□ -0.07
Trim28-201ENSMUST00000005705 Gm13199Q8C8E0 125 aa14.58□□□□□ -0.07
Trim28-201ENSMUST00000005705 Arr3Q9EQP6 381 aa14.58□□□□□ -0.07
Trim28-201ENSMUST00000005705 Gal3st1Q9JHE4 423 aa14.58□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 32.6 ms