RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 MGLLQ99685 303 aa8.11□□□□□ -1.11
PHGDH-228ENST00000641847 BRD7Q9NPI1 651 aa8.11□□□□□ -1.11
PHGDH-228ENST00000641847 ZNF701Q9NV72 531 aaPredicted RBP8.11□□□□□ -1.11
PHGDH-228ENST00000641847 N6AMT1Q9Y5N5 214 aa8.11□□□□□ -1.11
PHGDH-228ENST00000641847 ABCA1O95477 2261 aa8.1□□□□□ -1.11
PHGDH-228ENST00000641847 PKD1L1Q8TDX9 2849 aa8.1□□□□□ -1.11
PHGDH-228ENST00000641847 TMEM269A0A1B0GVZ9 245 aa8.1□□□□□ -1.11
PHGDH-228ENST00000641847 PNPP00491 289 aa8.1□□□□□ -1.11
PHGDH-228ENST00000641847 SLC2A1P11166 492 aa8.1□□□□□ -1.11
PHGDH-228ENST00000641847 ANOS1P23352 680 aa8.1□□□□□ -1.11
PHGDH-228ENST00000641847 THBS2P35442 1172 aa8.1□□□□□ -1.11
PHGDH-228ENST00000641847 WNT5AP41221 380 aa8.1□□□□□ -1.11
PHGDH-228ENST00000641847 KIR3DL2P43630 455 aa8.1□□□□□ -1.11
PHGDH-228ENST00000641847 ALDH3B2P48448 385 aa8.1□□□□□ -1.11
PHGDH-228ENST00000641847 MMP16P51512 607 aa8.1□□□□□ -1.11
PHGDH-228ENST00000641847 NANOS3P60323 173 aaKnown RBP8.1□□□□□ -1.11
PHGDH-228ENST00000641847 BDH1Q02338 343 aa8.1□□□□□ -1.11
PHGDH-228ENST00000641847 ALKBH1Q13686 389 aaKnown RBP8.1□□□□□ -1.11
PHGDH-228ENST00000641847 RSPO1Q2MKA7 263 aaPredicted RBP8.1□□□□□ -1.11
PHGDH-228ENST00000641847 C3orf36Q3SXR2 165 aa8.1□□□□□ -1.11
PHGDH-228ENST00000641847 CCDC58Q4VC31 144 aa8.1□□□□□ -1.11
PHGDH-228ENST00000641847 SYT6Q5T7P8 510 aaPredicted RBP8.1□□□□□ -1.11
PHGDH-228ENST00000641847 LIPKQ5VXJ0 399 aa8.1□□□□□ -1.11
PHGDH-228ENST00000641847 RPL22L1Q6P5R6 122 aaKnown RBP8.1□□□□□ -1.11
PHGDH-228ENST00000641847 ARL9Q6T311 187 aa8.1□□□□□ -1.11
PHGDH-228ENST00000641847 C22orf34Q6ZV56 151 aa8.1□□□□□ -1.11
PHGDH-228ENST00000641847 FAM57BQ71RH2 274 aa8.1□□□□□ -1.11
PHGDH-228ENST00000641847 CATSPERDQ86XM0 798 aa8.1□□□□□ -1.11
PHGDH-228ENST00000641847 PRSS35Q8N3Z0 413 aa8.1□□□□□ -1.11
PHGDH-228ENST00000641847 MAPK1IP1LQ8NDC0 245 aa8.1□□□□□ -1.11
PHGDH-228ENST00000641847 OR2G2Q8NGZ5 317 aa8.1□□□□□ -1.11
PHGDH-228ENST00000641847 SMIM19Q96E16 107 aa8.1□□□□□ -1.11
PHGDH-228ENST00000641847 TRMT61AQ96FX7 289 aaKnown RBP8.1□□□□□ -1.11
PHGDH-228ENST00000641847 PGAM5Q96HS1 289 aa8.1□□□□□ -1.11
PHGDH-228ENST00000641847 POM121L2Q96KW2 1035 aa8.1□□□□□ -1.11
PHGDH-228ENST00000641847 WFIKKN1Q96NZ8 548 aa8.1□□□□□ -1.11
PHGDH-228ENST00000641847 DCLRE1CQ96SD1 692 aaKnown RBP8.1□□□□□ -1.11
PHGDH-228ENST00000641847 PBOV1Q9GZY1 135 aa8.1□□□□□ -1.11
PHGDH-228ENST00000641847 CDH20Q9HBT6 801 aa8.1□□□□□ -1.11
PHGDH-228ENST00000641847 ISYNA1Q9NPH2 558 aa8.1□□□□□ -1.11
PHGDH-228ENST00000641847 G6PC2Q9NQR9 355 aa8.1□□□□□ -1.11
PHGDH-228ENST00000641847 LPAR3Q9UBY5 353 aa8.1□□□□□ -1.11
PHGDH-228ENST00000641847 NUFIP1Q9UHK0 495 aaKnown RBP8.1□□□□□ -1.11
PHGDH-228ENST00000641847 OR52A1Q9UKL2 312 aa8.1□□□□□ -1.11
PHGDH-228ENST00000641847 SIRT4Q9Y6E7 314 aaPredicted RBP8.1□□□□□ -1.11
PHGDH-228ENST00000641847 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.1□□□□□ -1.11
PHGDH-228ENST00000641847 TGP01266 2768 aa8.1□□□□□ -1.11
PHGDH-228ENST00000641847 IGHV2OR16-5A0A0B4J2B6 119 aa8.09□□□□□ -1.11
PHGDH-228ENST00000641847 TRBV2A0A0J9YWF9 115 aa8.09□□□□□ -1.11
PHGDH-228ENST00000641847 DEFB108AA8MXU0 73 aa8.09□□□□□ -1.11
PHGDH-228ENST00000641847 OGG1O15527 345 aa8.09□□□□□ -1.11
PHGDH-228ENST00000641847 TBX1O43435 398 aa8.09□□□□□ -1.11
PHGDH-228ENST00000641847 LCATP04180 440 aa8.09□□□□□ -1.11
PHGDH-228ENST00000641847 CPEP16870 476 aa8.09□□□□□ -1.11
PHGDH-228ENST00000641847 CELP19835 753 aa8.09□□□□□ -1.11
PHGDH-228ENST00000641847 CALCRP30988 508 aa8.09□□□□□ -1.11
PHGDH-228ENST00000641847 LIPAP38571 399 aa8.09□□□□□ -1.11
PHGDH-228ENST00000641847 RPL5P46777 297 aaKnown RBP8.09□□□□□ -1.11
PHGDH-228ENST00000641847 SLC3A1Q07837 685 aa8.09□□□□□ -1.11
PHGDH-228ENST00000641847 SPOCK1Q08629 439 aa8.09□□□□□ -1.11
PHGDH-228ENST00000641847 SSX1Q16384 188 aa8.09□□□□□ -1.11
PHGDH-228ENST00000641847 ODF4Q2M2E3 257 aa8.09□□□□□ -1.11
PHGDH-228ENST00000641847 GFOD2Q3B7J2 385 aa8.09□□□□□ -1.11
PHGDH-228ENST00000641847 SNAI3Q3KNW1 292 aa8.09□□□□□ -1.11
PHGDH-228ENST00000641847 DMKNQ6E0U4 476 aaPredicted RBP8.09□□□□□ -1.11
PHGDH-228ENST00000641847 FDX2Q6P4F2 183 aa8.09□□□□□ -1.11
PHGDH-228ENST00000641847 RFPL4BQ6ZWI9 263 aa8.09□□□□□ -1.11
PHGDH-228ENST00000641847 PRSS45Q7RTY3 260 aa8.09□□□□□ -1.11
PHGDH-228ENST00000641847 IL17RDQ8NFM7 739 aa8.09□□□□□ -1.11
PHGDH-228ENST00000641847 OR8B12Q8NGG6 310 aa8.09□□□□□ -1.11
PHGDH-228ENST00000641847 OR13F1Q8NGS4 319 aa8.09□□□□□ -1.11
PHGDH-228ENST00000641847 RPS4Y2Q8TD47 263 aa8.09□□□□□ -1.11
PHGDH-228ENST00000641847 TMIGD2Q96BF3 282 aa8.09□□□□□ -1.11
PHGDH-228ENST00000641847 PGLYRP3Q96LB9 341 aa8.09□□□□□ -1.11
PHGDH-228ENST00000641847 OR10A2Q9H208 303 aa8.09□□□□□ -1.11
PHGDH-228ENST00000641847 SP140LQ9H930 580 aa8.09□□□□□ -1.11
PHGDH-228ENST00000641847 NGBQ9NPG2 151 aa8.09□□□□□ -1.11
PHGDH-228ENST00000641847 NDUFB11Q9NX14 153 aa8.09□□□□□ -1.11
PHGDH-228ENST00000641847 FRRS1LQ9P0K9 344 aa8.09□□□□□ -1.11
PHGDH-228ENST00000641847 SLC22A13Q9Y226 551 aa8.09□□□□□ -1.11
PHGDH-228ENST00000641847 SVEP1Q4LDE5 3571 aa8.09□□□□□ -1.12
PHGDH-228ENST00000641847 C5orf63A6NC05 138 aa8.08□□□□□ -1.12
PHGDH-228ENST00000641847 ACOD1A6NK06 481 aa8.08□□□□□ -1.12
PHGDH-228ENST00000641847 TMEM212A6NML5 194 aa8.08□□□□□ -1.12
PHGDH-228ENST00000641847 OR4C45A6NMZ5 311 aa8.08□□□□□ -1.12
PHGDH-228ENST00000641847 P2RY10O00398 339 aa8.08□□□□□ -1.12
PHGDH-228ENST00000641847 CCRL2O00421 344 aa8.08□□□□□ -1.12
PHGDH-228ENST00000641847 TTRP02766 147 aa8.08□□□□□ -1.12
PHGDH-228ENST00000641847 FAM157BP0CG42 384 aa8.08□□□□□ -1.12
PHGDH-228ENST00000641847 UBCP0CG48 685 aaKnown RBP8.08□□□□□ -1.12
PHGDH-228ENST00000641847 CD40P25942 277 aa8.08□□□□□ -1.12
PHGDH-228ENST00000641847 TGFBR2P37173 567 aa8.08□□□□□ -1.12
PHGDH-228ENST00000641847 RGS6P49758 472 aa8.08□□□□□ -1.12
PHGDH-228ENST00000641847 CCR9P51686 369 aa8.08□□□□□ -1.12
PHGDH-228ENST00000641847 RPS25P62851 125 aaKnown RBP8.08□□□□□ -1.12
PHGDH-228ENST00000641847 NAAAQ02083 359 aa8.08□□□□□ -1.12
PHGDH-228ENST00000641847 TPBGQ13641 420 aa8.08□□□□□ -1.12
PHGDH-228ENST00000641847 BLMHQ13867 455 aa8.08□□□□□ -1.12
PHGDH-228ENST00000641847 GLYATL3Q5SZD4 288 aa8.08□□□□□ -1.12
PHGDH-228ENST00000641847 TMEM108Q6UXF1 575 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms