RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 SERINC1Q9NRX5 453 aa17.84■□□□□ 0.45
SYNGAP1-227ENST00000638142 RPH3AQ9Y2J0 694 aaPredicted RBP17.84■□□□□ 0.45
SYNGAP1-227ENST00000638142 USP34Q70CQ2 3546 aa17.84■□□□□ 0.45
SYNGAP1-227ENST00000638142 IGHV1OR21-1A0A087WYE8 117 aa17.84■□□□□ 0.45
SYNGAP1-227ENST00000638142 FOXK1P85037 733 aa17.84■□□□□ 0.45
SYNGAP1-227ENST00000638142 FOXF1Q12946 379 aa17.84■□□□□ 0.45
SYNGAP1-227ENST00000638142 MICBQ29980 383 aa17.84■□□□□ 0.45
SYNGAP1-227ENST00000638142 THEM4Q5T1C6 240 aa17.84■□□□□ 0.45
SYNGAP1-227ENST00000638142 RAB11FIP2Q7L804 512 aa17.84■□□□□ 0.45
SYNGAP1-227ENST00000638142 NAA40Q86UY6 237 aa17.84■□□□□ 0.45
SYNGAP1-227ENST00000638142 DEFB119Q8N690 84 aa17.84■□□□□ 0.45
SYNGAP1-227ENST00000638142 BOLLQ8N9W6 283 aaKnown RBP17.84■□□□□ 0.45
SYNGAP1-227ENST00000638142 OR51E1Q8TCB6 317 aa17.84■□□□□ 0.45
SYNGAP1-227ENST00000638142 EMC6Q9BV81 110 aa17.84■□□□□ 0.45
SYNGAP1-227ENST00000638142 MRPL13Q9BYD1 178 aaKnown RBP17.84■□□□□ 0.45
SYNGAP1-227ENST00000638142 VDAC3Q9Y277 283 aa17.84■□□□□ 0.45
SYNGAP1-227ENST00000638142 MRPS28Q9Y2Q9 187 aaKnown RBP17.84■□□□□ 0.45
SYNGAP1-227ENST00000638142 ADCYAP1P18509 176 aa17.83■□□□□ 0.45
SYNGAP1-227ENST00000638142 B2MP61769 119 aa17.83■□□□□ 0.45
SYNGAP1-227ENST00000638142 RAB30Q15771 203 aa17.83■□□□□ 0.45
SYNGAP1-227ENST00000638142 GUCA2BQ16661 112 aa17.83■□□□□ 0.45
SYNGAP1-227ENST00000638142 PTCRAQ6ISU1 281 aaPredicted RBP17.83■□□□□ 0.45
SYNGAP1-227ENST00000638142 GLIPR1L1Q6UWM5 242 aa17.83■□□□□ 0.45
SYNGAP1-227ENST00000638142 C16orf47Q6ZP98 133 aaPredicted RBP17.83■□□□□ 0.45
SYNGAP1-227ENST00000638142 TSTD1Q8NFU3 115 aa17.83■□□□□ 0.45
SYNGAP1-227ENST00000638142 KCNG3Q8TAE7 436 aa17.83■□□□□ 0.45
SYNGAP1-227ENST00000638142 RNF141Q8WVD5 230 aa17.83■□□□□ 0.45
SYNGAP1-227ENST00000638142 RAB3CQ96E17 227 aa17.83■□□□□ 0.45
SYNGAP1-227ENST00000638142 RNF126Q9BV68 326 aa17.83■□□□□ 0.45
SYNGAP1-227ENST00000638142 GPR132Q9UNW8 380 aa17.83■□□□□ 0.45
SYNGAP1-227ENST00000638142 A0A0B4J2A0 478 aa17.83■□□□□ 0.44
SYNGAP1-227ENST00000638142 ZNF878C9JN71 531 aa17.83■□□□□ 0.44
SYNGAP1-227ENST00000638142 HIST1H1DP16402 221 aaKnown RBP17.83■□□□□ 0.44
SYNGAP1-227ENST00000638142 FAM189A2Q15884 450 aa17.83■□□□□ 0.44
SYNGAP1-227ENST00000638142 DHRS7BQ6IAN0 325 aaPredicted RBP17.83■□□□□ 0.44
SYNGAP1-227ENST00000638142 ARL11Q969Q4 196 aa17.83■□□□□ 0.44
SYNGAP1-227ENST00000638142 RAB18Q9NP72 206 aa17.83■□□□□ 0.44
SYNGAP1-227ENST00000638142 SHPKQ9UHJ6 478 aa17.83■□□□□ 0.44
SYNGAP1-227ENST00000638142 CARHSP1Q9Y2V2 147 aaKnown RBP17.83■□□□□ 0.44
SYNGAP1-227ENST00000638142 A0A0A6YYD4 124 aa17.82■□□□□ 0.44
SYNGAP1-227ENST00000638142 ETV2O00321 342 aaPredicted RBP17.82■□□□□ 0.44
SYNGAP1-227ENST00000638142 CD79AP11912 226 aa17.82■□□□□ 0.44
SYNGAP1-227ENST00000638142 LTBRP36941 435 aa17.82■□□□□ 0.44
SYNGAP1-227ENST00000638142 DCDP81605 110 aaKnown RBP17.82■□□□□ 0.44
SYNGAP1-227ENST00000638142 PGAP1Q75T13 922 aa17.82■□□□□ 0.44
SYNGAP1-227ENST00000638142 RTN4RL2Q86UN3 420 aa17.82■□□□□ 0.44
SYNGAP1-227ENST00000638142 OR2I1PQ8NGU4 316 aa17.82■□□□□ 0.44
SYNGAP1-227ENST00000638142 B3GAT1Q9P2W7 334 aa17.82■□□□□ 0.44
SYNGAP1-227ENST00000638142 ZNF629Q9UEG4 869 aaPredicted RBP17.82■□□□□ 0.44
SYNGAP1-227ENST00000638142 LHFPL6Q9Y693 200 aa17.82■□□□□ 0.44
SYNGAP1-227ENST00000638142 METTL12A8MUP2 240 aa17.82■□□□□ 0.44
SYNGAP1-227ENST00000638142 KCNAB3O43448 404 aa17.82■□□□□ 0.44
SYNGAP1-227ENST00000638142 DUX1O43812 170 aa17.82■□□□□ 0.44
SYNGAP1-227ENST00000638142 MPIG6BO95866 241 aa17.82■□□□□ 0.44
SYNGAP1-227ENST00000638142 FOSL2P15408 326 aa17.82■□□□□ 0.44
SYNGAP1-227ENST00000638142 CFHR1Q03591 330 aa17.82■□□□□ 0.44
SYNGAP1-227ENST00000638142 AIMP2Q13155 320 aaKnown RBP17.82■□□□□ 0.44
SYNGAP1-227ENST00000638142 TMEM88Q6PEY1 159 aa17.82■□□□□ 0.44
SYNGAP1-227ENST00000638142 OR5AS1Q8N127 324 aa17.82■□□□□ 0.44
SYNGAP1-227ENST00000638142 TMEM41AQ96HV5 264 aa17.82■□□□□ 0.44
SYNGAP1-227ENST00000638142 C1orf147Q96MC9 270 aaPredicted RBP17.82■□□□□ 0.44
SYNGAP1-227ENST00000638142 SCGB3A2Q96PL1 93 aa17.82■□□□□ 0.44
SYNGAP1-227ENST00000638142 C5orf66Q9H5L9 145 aa17.82■□□□□ 0.44
SYNGAP1-227ENST00000638142 SEMA5BQ9P283 1151 aa17.82■□□□□ 0.44
SYNGAP1-227ENST00000638142 IGHV3-20A0A0C4DH32 117 aa17.81■□□□□ 0.44
SYNGAP1-227ENST00000638142 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.81■□□□□ 0.44
SYNGAP1-227ENST00000638142 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.81■□□□□ 0.44
SYNGAP1-227ENST00000638142 H3BML4 177 aa17.81■□□□□ 0.44
SYNGAP1-227ENST00000638142 CDC14BO60729 498 aa17.81■□□□□ 0.44
SYNGAP1-227ENST00000638142 SFT2D2O95562 160 aa17.81■□□□□ 0.44
SYNGAP1-227ENST00000638142 GIMD1P0DJR0 217 aa17.81■□□□□ 0.44
SYNGAP1-227ENST00000638142 STK11Q15831 433 aa17.81■□□□□ 0.44
SYNGAP1-227ENST00000638142 PLAC9Q5JTB6 97 aa17.81■□□□□ 0.44
SYNGAP1-227ENST00000638142 SPAG16Q8N0X2 631 aa17.81■□□□□ 0.44
SYNGAP1-227ENST00000638142 ZSCAN4Q8NAM6 433 aaPredicted RBP17.81■□□□□ 0.44
SYNGAP1-227ENST00000638142 APCDD1LQ8NCL9 501 aa17.81■□□□□ 0.44
SYNGAP1-227ENST00000638142 SMRP1Q8NCR6 262 aa17.81■□□□□ 0.44
SYNGAP1-227ENST00000638142 TMEM104Q8NE00 496 aa17.81■□□□□ 0.44
SYNGAP1-227ENST00000638142 OR2AJ1Q8NGZ0 328 aa17.81■□□□□ 0.44
SYNGAP1-227ENST00000638142 PAQR8Q8TEZ7 354 aa17.81■□□□□ 0.44
SYNGAP1-227ENST00000638142 DUSP15Q9H1R2 295 aaPredicted RBP17.81■□□□□ 0.44
SYNGAP1-227ENST00000638142 CYTL1Q9NRR1 136 aa17.81■□□□□ 0.44
SYNGAP1-227ENST00000638142 SRPK3Q9UPE1 567 aa17.81■□□□□ 0.44
SYNGAP1-227ENST00000638142 POLR1DQ9Y2S0 133 aa17.81■□□□□ 0.44
SYNGAP1-227ENST00000638142 C2CD4DB7Z1M9 353 aa17.81■□□□□ 0.44
SYNGAP1-227ENST00000638142 ZNF354AO60765 605 aaPredicted RBP17.81■□□□□ 0.44
SYNGAP1-227ENST00000638142 PVALBP20472 110 aaPredicted RBP17.81■□□□□ 0.44
SYNGAP1-227ENST00000638142 BCKDHBP21953 392 aa17.81■□□□□ 0.44
SYNGAP1-227ENST00000638142 SGCAQ16586 387 aa17.81■□□□□ 0.44
SYNGAP1-227ENST00000638142 SHISA6Q6ZSJ9 500 aa17.81■□□□□ 0.44
SYNGAP1-227ENST00000638142 TMEM230Q96A57 120 aa17.81■□□□□ 0.44
SYNGAP1-227ENST00000638142 SPACA5Q96QH8 159 aa17.81■□□□□ 0.44
SYNGAP1-227ENST00000638142 TMEM59Q9BXS4 323 aa17.81■□□□□ 0.44
SYNGAP1-227ENST00000638142 SPTBN5Q9NRC6 3674 aaKnown RBP17.81■□□□□ 0.44
SYNGAP1-227ENST00000638142 SOCS1O15524 211 aa17.8■□□□□ 0.44
SYNGAP1-227ENST00000638142 LYL1P12980 280 aa17.8■□□□□ 0.44
SYNGAP1-227ENST00000638142 ABOP16442 354 aa17.8■□□□□ 0.44
SYNGAP1-227ENST00000638142 CLRN1P58418 232 aa17.8■□□□□ 0.44
SYNGAP1-227ENST00000638142 NKAPLQ5M9Q1 402 aa17.8■□□□□ 0.44
SYNGAP1-227ENST00000638142 TMPRSS9Q7Z410 1059 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms