RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 CD74P04233 296 aa18.92■□□□□ 0.62
CLN6-224ENST00000638076 ITGB2P05107 769 aa18.92■□□□□ 0.62
CLN6-224ENST00000638076 HIST1H3AP68431 136 aa18.92■□□□□ 0.62
CLN6-224ENST00000638076 HIST2H3PS2Q5TEC6 136 aa18.92■□□□□ 0.62
CLN6-224ENST00000638076 HIST2H3AQ71DI3 136 aa18.92■□□□□ 0.62
CLN6-224ENST00000638076 OR4S1Q8NGB4 309 aa18.92■□□□□ 0.62
CLN6-224ENST00000638076 LIN37Q96GY3 246 aaPredicted RBP18.92■□□□□ 0.62
CLN6-224ENST00000638076 FBLN5Q9UBX5 448 aa18.92■□□□□ 0.62
CLN6-224ENST00000638076 ZNF107Q9UII5 783 aaPredicted RBP18.92■□□□□ 0.62
CLN6-224ENST00000638076 MRPS28Q9Y2Q9 187 aaKnown RBP18.92■□□□□ 0.62
CLN6-224ENST00000638076 FLVCR1Q9Y5Y0 555 aa18.92■□□□□ 0.62
CLN6-224ENST00000638076 NCKAP5O14513 1909 aa18.92■□□□□ 0.62
CLN6-224ENST00000638076 TPOP07202 933 aa18.91■□□□□ 0.62
CLN6-224ENST00000638076 GIPP09681 153 aaPredicted RBP18.91■□□□□ 0.62
CLN6-224ENST00000638076 OR3A4PP47883 348 aa18.91■□□□□ 0.62
CLN6-224ENST00000638076 PER3P56645 1201 aa18.91■□□□□ 0.62
CLN6-224ENST00000638076 RSPO1Q2MKA7 263 aaPredicted RBP18.91■□□□□ 0.62
CLN6-224ENST00000638076 PLA2G2CQ5R387 149 aa18.91■□□□□ 0.62
CLN6-224ENST00000638076 TRAPPC6BQ86SZ2 158 aa18.91■□□□□ 0.62
CLN6-224ENST00000638076 KIAA1549Q9HCM3 1950 aa18.91■□□□□ 0.62
CLN6-224ENST00000638076 CNTRLQ7Z7A1 2325 aa18.91■□□□□ 0.62
CLN6-224ENST00000638076 PINLYPA6NC86 204 aa18.91■□□□□ 0.62
CLN6-224ENST00000638076 CXCL13O43927 109 aa18.91■□□□□ 0.62
CLN6-224ENST00000638076 ZNF735P0CB33 412 aa18.91■□□□□ 0.62
CLN6-224ENST00000638076 GNB3P16520 340 aa18.91■□□□□ 0.62
CLN6-224ENST00000638076 GDF1P27539 372 aa18.91■□□□□ 0.62
CLN6-224ENST00000638076 SSTR2P30874 369 aa18.91■□□□□ 0.62
CLN6-224ENST00000638076 NTF4P34130 210 aa18.91■□□□□ 0.62
CLN6-224ENST00000638076 ZNF81P51508 661 aa18.91■□□□□ 0.62
CLN6-224ENST00000638076 UBE2MP61081 183 aaKnown RBP18.91■□□□□ 0.62
CLN6-224ENST00000638076 DMRTC1Q5HYR2 192 aa18.91■□□□□ 0.62
CLN6-224ENST00000638076 NAXDQ8IW45 347 aa18.91■□□□□ 0.62
CLN6-224ENST00000638076 MUC20Q8N307 709 aaPredicted RBP18.91■□□□□ 0.62
CLN6-224ENST00000638076 BPIFB2Q8N4F0 458 aa18.91■□□□□ 0.62
CLN6-224ENST00000638076 ROBO4Q8WZ75 1007 aa18.91■□□□□ 0.62
CLN6-224ENST00000638076 FBXO17Q96EF6 278 aa18.91■□□□□ 0.62
CLN6-224ENST00000638076 PLEK2Q9NYT0 353 aa18.91■□□□□ 0.62
CLN6-224ENST00000638076 UPB1Q9UBR1 384 aa18.91■□□□□ 0.62
CLN6-224ENST00000638076 IGKV1-9A0A0C4DH69 117 aa18.9■□□□□ 0.62
CLN6-224ENST00000638076 CDX4O14627 284 aaPredicted RBP18.9■□□□□ 0.62
CLN6-224ENST00000638076 IGLV3-1P01715 115 aa18.9■□□□□ 0.62
CLN6-224ENST00000638076 MELTFP08582 738 aa18.9■□□□□ 0.62
CLN6-224ENST00000638076 SPINK14Q6IE38 97 aa18.9■□□□□ 0.62
CLN6-224ENST00000638076 FTMTQ8N4E7 242 aa18.9■□□□□ 0.62
CLN6-224ENST00000638076 UXS1Q8NBZ7 420 aa18.9■□□□□ 0.62
CLN6-224ENST00000638076 OR10R2Q8NGX6 335 aa18.9■□□□□ 0.62
CLN6-224ENST00000638076 NUDCD2Q8WVJ2 157 aa18.9■□□□□ 0.62
CLN6-224ENST00000638076 LOXL4Q96JB6 756 aa18.9■□□□□ 0.62
CLN6-224ENST00000638076 NICN1Q9BSH3 213 aa18.9■□□□□ 0.62
CLN6-224ENST00000638076 SELENOIQ9C0D9 397 aa18.9■□□□□ 0.62
CLN6-224ENST00000638076 POFUT1Q9H488 388 aa18.9■□□□□ 0.62
CLN6-224ENST00000638076 GPR179Q6PRD1 2367 aa18.9■□□□□ 0.62
CLN6-224ENST00000638076 ANKRD34BA5PLL1 514 aa18.9■□□□□ 0.62
CLN6-224ENST00000638076 SCGNO76038 276 aa18.9■□□□□ 0.62
CLN6-224ENST00000638076 OR2A4O95047 310 aa18.9■□□□□ 0.62
CLN6-224ENST00000638076 DBHP09172 617 aa18.9■□□□□ 0.62
CLN6-224ENST00000638076 DLSTP36957 453 aa18.9■□□□□ 0.62
CLN6-224ENST00000638076 TSPAN5P62079 268 aa18.9■□□□□ 0.62
CLN6-224ENST00000638076 MRPS34P82930 218 aaKnown RBP18.9■□□□□ 0.62
CLN6-224ENST00000638076 C4orf46Q504U0 113 aa18.9■□□□□ 0.62
CLN6-224ENST00000638076 ZBTB37Q5TC79 503 aa18.9■□□□□ 0.62
CLN6-224ENST00000638076 GVQW1Q8N7I0 195 aa18.9■□□□□ 0.62
CLN6-224ENST00000638076 TMEM104Q8NE00 496 aa18.9■□□□□ 0.62
CLN6-224ENST00000638076 OR10D3Q8NH80 312 aa18.9■□□□□ 0.62
CLN6-224ENST00000638076 WDR89Q96FK6 387 aaPredicted RBP18.9■□□□□ 0.62
CLN6-224ENST00000638076 C1orf147Q96MC9 270 aaPredicted RBP18.9■□□□□ 0.62
CLN6-224ENST00000638076 OR2A7Q96R45 310 aa18.9■□□□□ 0.62
CLN6-224ENST00000638076 GPER1Q99527 375 aa18.9■□□□□ 0.62
CLN6-224ENST00000638076 SLC25A21Q9BQT8 299 aaPredicted RBP18.9■□□□□ 0.62
CLN6-224ENST00000638076 HEXA-AS1Q9H8Q6 139 aa18.9■□□□□ 0.62
CLN6-224ENST00000638076 LRFN1Q9P244 771 aa18.9■□□□□ 0.62
CLN6-224ENST00000638076 ZNF716A6NP11 495 aa18.89■□□□□ 0.61
CLN6-224ENST00000638076 ERVH48-1M5A8F1 160 aa18.89■□□□□ 0.61
CLN6-224ENST00000638076 ALX3O95076 343 aa18.89■□□□□ 0.61
CLN6-224ENST00000638076 CSN2P05814 226 aa18.89■□□□□ 0.61
CLN6-224ENST00000638076 RAP2BP61225 183 aa18.89■□□□□ 0.61
CLN6-224ENST00000638076 FAM27BQ5VT28 67 aa18.89■□□□□ 0.61
CLN6-224ENST00000638076 TEX261Q6UWH6 196 aa18.89■□□□□ 0.61
CLN6-224ENST00000638076 ADGRG7Q96K78 797 aa18.89■□□□□ 0.61
CLN6-224ENST00000638076 LPAR5Q9H1C0 372 aa18.89■□□□□ 0.61
CLN6-224ENST00000638076 U3KQ87 197 aa18.89■□□□□ 0.61
CLN6-224ENST00000638076 A0A0U1RQV5 110 aa18.89■□□□□ 0.61
CLN6-224ENST00000638076 TMEM82A0PJX8 343 aa18.89■□□□□ 0.61
CLN6-224ENST00000638076 M0R135 149 aa18.89■□□□□ 0.61
CLN6-224ENST00000638076 MPIG6BO95866 241 aa18.89■□□□□ 0.61
CLN6-224ENST00000638076 POU3F2P20265 443 aaPredicted RBP18.89■□□□□ 0.61
CLN6-224ENST00000638076 OTX1P32242 354 aaPredicted RBP18.89■□□□□ 0.61
CLN6-224ENST00000638076 C2orf68Q2NKX9 166 aa18.89■□□□□ 0.61
CLN6-224ENST00000638076 SCGB2B2Q4G0G5 96 aa18.89■□□□□ 0.61
CLN6-224ENST00000638076 OR2W3Q7Z3T1 314 aa18.89■□□□□ 0.61
CLN6-224ENST00000638076 RTN4RL2Q86UN3 420 aa18.89■□□□□ 0.61
CLN6-224ENST00000638076 CD163Q86VB7 1156 aa18.89■□□□□ 0.61
CLN6-224ENST00000638076 OR2V1Q8NHB1 315 aa18.89■□□□□ 0.61
CLN6-224ENST00000638076 ZNF799Q96GE5 643 aa18.89■□□□□ 0.61
CLN6-224ENST00000638076 SLC6A7Q99884 636 aa18.89■□□□□ 0.61
CLN6-224ENST00000638076 ALX4Q9H161 411 aaPredicted RBP18.89■□□□□ 0.61
CLN6-224ENST00000638076 CRLF2Q9HC73 371 aa18.89■□□□□ 0.61
CLN6-224ENST00000638076 CCDC187A0A096LP49 1063 aa18.88■□□□□ 0.61
CLN6-224ENST00000638076 CNR1P21554 472 aa18.88■□□□□ 0.61
CLN6-224ENST00000638076 GSK3AP49840 483 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms