RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 CENPVL3A0A0U1RRI6 287 aa17.21■□□□□ 0.35
TRAPPC3-208ENST00000616074 FCN3O75636 299 aa17.21■□□□□ 0.35
TRAPPC3-208ENST00000616074 KNG1P01042 644 aa17.21■□□□□ 0.35
TRAPPC3-208ENST00000616074 LIPFP07098 398 aa17.21■□□□□ 0.35
TRAPPC3-208ENST00000616074 GRPP07492 148 aa17.21■□□□□ 0.35
TRAPPC3-208ENST00000616074 SLC2A1P11166 492 aa17.21■□□□□ 0.35
TRAPPC3-208ENST00000616074 PRKXP51817 358 aa17.21■□□□□ 0.35
TRAPPC3-208ENST00000616074 RAG2P55895 527 aa17.21■□□□□ 0.35
TRAPPC3-208ENST00000616074 RELBQ01201 579 aa17.21■□□□□ 0.35
TRAPPC3-208ENST00000616074 ZNF362Q5T0B9 420 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC3-208ENST00000616074 ZDHHC21Q8IVQ6 265 aa17.21■□□□□ 0.35
TRAPPC3-208ENST00000616074 LNX2Q8N448 690 aa17.21■□□□□ 0.35
TRAPPC3-208ENST00000616074 GCSAMQ8N6F7 178 aa17.21■□□□□ 0.35
TRAPPC3-208ENST00000616074 KIR3DL3Q8N743 410 aa17.21■□□□□ 0.35
TRAPPC3-208ENST00000616074 SLC37A3Q8NCC5 494 aa17.21■□□□□ 0.35
TRAPPC3-208ENST00000616074 OR56B2PQ8NGI1 322 aa17.21■□□□□ 0.35
TRAPPC3-208ENST00000616074 OR8D4Q8NGM9 314 aa17.21■□□□□ 0.35
TRAPPC3-208ENST00000616074 OR9Q1Q8NGQ5 310 aa17.21■□□□□ 0.35
TRAPPC3-208ENST00000616074 WFDC12Q8WWY7 111 aa17.21■□□□□ 0.35
TRAPPC3-208ENST00000616074 WDFY2Q96P53 400 aa17.21■□□□□ 0.35
TRAPPC3-208ENST00000616074 BTBD10Q9BSF8 475 aa17.21■□□□□ 0.35
TRAPPC3-208ENST00000616074 COPS4Q9BT78 406 aa17.21■□□□□ 0.35
TRAPPC3-208ENST00000616074 C1RLQ9NZP8 487 aa17.21■□□□□ 0.35
TRAPPC3-208ENST00000616074 KIF17Q9P2E2 1029 aa17.21■□□□□ 0.35
TRAPPC3-208ENST00000616074 VWFP04275 2813 aa17.21■□□□□ 0.35
TRAPPC3-208ENST00000616074 TGP01266 2768 aa17.2■□□□□ 0.34
TRAPPC3-208ENST00000616074 TRAV38-1A0A0B4J264 116 aa17.2■□□□□ 0.34
TRAPPC3-208ENST00000616074 A0A1B0GUS0 222 aa17.2■□□□□ 0.34
TRAPPC3-208ENST00000616074 GYPAP02724 150 aa17.2■□□□□ 0.34
TRAPPC3-208ENST00000616074 CRYBA1P05813 215 aa17.2■□□□□ 0.34
TRAPPC3-208ENST00000616074 DEFA6Q01524 100 aa17.2■□□□□ 0.34
TRAPPC3-208ENST00000616074 SAMD4BQ5PRF9 694 aaKnown RBP17.2■□□□□ 0.34
TRAPPC3-208ENST00000616074 RPL13AP3Q6NVV1 102 aa17.2■□□□□ 0.34
TRAPPC3-208ENST00000616074 FAM90A1Q86YD7 464 aa17.2■□□□□ 0.34
TRAPPC3-208ENST00000616074 PGAM4Q8N0Y7 254 aa17.2■□□□□ 0.34
TRAPPC3-208ENST00000616074 TMEM86BQ8N661 226 aa17.2■□□□□ 0.34
TRAPPC3-208ENST00000616074 OR4C15Q8NGM1 316 aa17.2■□□□□ 0.34
TRAPPC3-208ENST00000616074 OR4F5Q8NH21 305 aa17.2■□□□□ 0.34
TRAPPC3-208ENST00000616074 GATAD2BQ8WXI9 593 aa17.2■□□□□ 0.34
TRAPPC3-208ENST00000616074 SLAMF6Q96DU3 332 aa17.2■□□□□ 0.34
TRAPPC3-208ENST00000616074 FAM71F1Q96KD3 344 aaPredicted RBP17.2■□□□□ 0.34
TRAPPC3-208ENST00000616074 CDRT15Q96T59 188 aa17.2■□□□□ 0.34
TRAPPC3-208ENST00000616074 FAM107BQ9H098 131 aa17.2■□□□□ 0.34
TRAPPC3-208ENST00000616074 SIRPDQ9H106 197 aa17.2■□□□□ 0.34
TRAPPC3-208ENST00000616074 BEX1Q9HBH7 125 aa17.2■□□□□ 0.34
TRAPPC3-208ENST00000616074 TRIM36Q9NQ86 728 aa17.2■□□□□ 0.34
TRAPPC3-208ENST00000616074 N6AMT1Q9Y5N5 214 aa17.2■□□□□ 0.34
TRAPPC3-208ENST00000616074 LYVE1Q9Y5Y7 322 aa17.2■□□□□ 0.34
TRAPPC3-208ENST00000616074 A6NLC8 198 aa17.19■□□□□ 0.34
TRAPPC3-208ENST00000616074 NDUFA2O43678 99 aa17.19■□□□□ 0.34
TRAPPC3-208ENST00000616074 SPARCP09486 303 aa17.19■□□□□ 0.34
TRAPPC3-208ENST00000616074 METTL11BQ5VVY1 283 aa17.19■□□□□ 0.34
TRAPPC3-208ENST00000616074 PNLDC1Q8NA58 520 aaKnown RBP17.19■□□□□ 0.34
TRAPPC3-208ENST00000616074 SPERTQ8NA61 448 aa17.19■□□□□ 0.34
TRAPPC3-208ENST00000616074 KCNJ15Q99712 375 aa17.19■□□□□ 0.34
TRAPPC3-208ENST00000616074 CENPMQ9NSP4 180 aa17.19■□□□□ 0.34
TRAPPC3-208ENST00000616074 IL20Q9NYY1 176 aa17.19■□□□□ 0.34
TRAPPC3-208ENST00000616074 hCG_1807616A0A1W2PRN6 198 aa17.18■□□□□ 0.34
TRAPPC3-208ENST00000616074 SNX3O60493 162 aa17.18■□□□□ 0.34
TRAPPC3-208ENST00000616074 NDUFA7O95182 113 aa17.18■□□□□ 0.34
TRAPPC3-208ENST00000616074 GYPBP06028 91 aa17.18■□□□□ 0.34
TRAPPC3-208ENST00000616074 ENTPD1P49961 510 aa17.18■□□□□ 0.34
TRAPPC3-208ENST00000616074 HMGA2P52926 109 aa17.18■□□□□ 0.34
TRAPPC3-208ENST00000616074 POU4F2Q12837 409 aa17.18■□□□□ 0.34
TRAPPC3-208ENST00000616074 TAF13Q15543 124 aa17.18■□□□□ 0.34
TRAPPC3-208ENST00000616074 PCK2Q16822 640 aa17.18■□□□□ 0.34
TRAPPC3-208ENST00000616074 PDLIM3Q53GG5 364 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC3-208ENST00000616074 OLFML2AQ68BL7 652 aa17.18■□□□□ 0.34
TRAPPC3-208ENST00000616074 ZNF770Q6IQ21 691 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC3-208ENST00000616074 C17orf107Q6ZR85 190 aa17.18■□□□□ 0.34
TRAPPC3-208ENST00000616074 BTN2A1Q7KYR7 527 aa17.18■□□□□ 0.34
TRAPPC3-208ENST00000616074 ZNF511Q8NB15 262 aa17.18■□□□□ 0.34
TRAPPC3-208ENST00000616074 LHX4Q969G2 390 aa17.18■□□□□ 0.34
TRAPPC3-208ENST00000616074 OPA3Q9H6K4 179 aa17.18■□□□□ 0.34
TRAPPC3-208ENST00000616074 ACOXLQ9NUZ1 547 aa17.18■□□□□ 0.34
TRAPPC3-208ENST00000616074 PDP1Q9P0J1 537 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC3-208ENST00000616074 POMT1Q9Y6A1 747 aa17.18■□□□□ 0.34
TRAPPC3-208ENST00000616074 IGHV3OR15-7A0A075B7D8 119 aa17.17■□□□□ 0.34
TRAPPC3-208ENST00000616074 IGHV1-69DA0A0B4J2H0 117 aa17.17■□□□□ 0.34
TRAPPC3-208ENST00000616074 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.17■□□□□ 0.34
TRAPPC3-208ENST00000616074 TNFRSF11BO00300 401 aa17.17■□□□□ 0.34
TRAPPC3-208ENST00000616074 DVL1O14640 695 aa17.17■□□□□ 0.34
TRAPPC3-208ENST00000616074 XRCC2O43543 280 aa17.17■□□□□ 0.34
TRAPPC3-208ENST00000616074 KRT36O76013 467 aa17.17■□□□□ 0.34
TRAPPC3-208ENST00000616074 LHBP01229 141 aa17.17■□□□□ 0.34
TRAPPC3-208ENST00000616074 GASTP01350 101 aa17.17■□□□□ 0.34
TRAPPC3-208ENST00000616074 IGHV1-69P01742 117 aa17.17■□□□□ 0.34
TRAPPC3-208ENST00000616074 FMO3P31513 532 aa17.17■□□□□ 0.34
TRAPPC3-208ENST00000616074 ARF6P62330 175 aa17.17■□□□□ 0.34
TRAPPC3-208ENST00000616074 CRMP1Q14194 572 aa17.17■□□□□ 0.34
TRAPPC3-208ENST00000616074 PDCD1Q15116 288 aa17.17■□□□□ 0.34
TRAPPC3-208ENST00000616074 TEX36Q5VZQ5 186 aa17.17■□□□□ 0.34
TRAPPC3-208ENST00000616074 RASSF6Q6ZTQ3 369 aa17.17■□□□□ 0.34
TRAPPC3-208ENST00000616074 WDR86Q86TI4 376 aa17.17■□□□□ 0.34
TRAPPC3-208ENST00000616074 SPSB4Q96A44 273 aa17.17■□□□□ 0.34
TRAPPC3-208ENST00000616074 TRIM15Q9C019 465 aa17.17■□□□□ 0.34
TRAPPC3-208ENST00000616074 TBC1D23Q9NUY8 699 aa17.17■□□□□ 0.34
TRAPPC3-208ENST00000616074 C14orf119Q9NWQ9 140 aa17.17■□□□□ 0.34
TRAPPC3-208ENST00000616074 A0A1B0GW55 424 aa17.16■□□□□ 0.34
TRAPPC3-208ENST00000616074 ZNF878C9JN71 531 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms