RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 SHISA5Q8N114 240 aa19.55■□□□□ 0.72
POLR2J3-220ENST00000613744 ZSCAN4Q8NAM6 433 aaPredicted RBP19.55■□□□□ 0.72
POLR2J3-220ENST00000613744 OR9A4Q8NGU2 314 aa19.55■□□□□ 0.72
POLR2J3-220ENST00000613744 OR10AC1Q8NH08 325 aa19.55■□□□□ 0.72
POLR2J3-220ENST00000613744 CCNL2Q96S94 520 aaPredicted RBP19.55■□□□□ 0.72
POLR2J3-220ENST00000613744 UFSP2Q9NUQ7 469 aa19.55■□□□□ 0.72
POLR2J3-220ENST00000613744 PIEZO1Q92508 2521 aa19.54■□□□□ 0.72
POLR2J3-220ENST00000613744 ELOA3DA6NLF2 546 aaPredicted RBP19.54■□□□□ 0.72
POLR2J3-220ENST00000613744 PPIHO43447 177 aaKnown RBP19.54■□□□□ 0.72
POLR2J3-220ENST00000613744 SMIM10L1P0DMW3 83 aa19.54■□□□□ 0.72
POLR2J3-220ENST00000613744 HTR2CP28335 458 aa19.54■□□□□ 0.72
POLR2J3-220ENST00000613744 MAS1LP35410 378 aa19.54■□□□□ 0.72
POLR2J3-220ENST00000613744 SULT1A2P50226 295 aa19.54■□□□□ 0.72
POLR2J3-220ENST00000613744 ELOA3BQ3SY89 546 aa19.54■□□□□ 0.72
POLR2J3-220ENST00000613744 OR52W1Q6IF63 320 aa19.54■□□□□ 0.72
POLR2J3-220ENST00000613744 FIGNL1Q6PIW4 674 aa19.54■□□□□ 0.72
POLR2J3-220ENST00000613744 COMMD1Q8N668 190 aa19.54■□□□□ 0.72
POLR2J3-220ENST00000613744 ELOA3Q8NG57 546 aa19.54■□□□□ 0.72
POLR2J3-220ENST00000613744 OR5T3Q8NGG3 340 aa19.54■□□□□ 0.72
POLR2J3-220ENST00000613744 SMIM10Q96HG1 83 aa19.54■□□□□ 0.72
POLR2J3-220ENST00000613744 ST6GALNAC1Q9NSC7 600 aaPredicted RBP19.54■□□□□ 0.72
POLR2J3-220ENST00000613744 KLK13Q9UKR3 277 aa19.54■□□□□ 0.72
POLR2J3-220ENST00000613744 FARSAQ9Y285 508 aaKnown RBP19.54■□□□□ 0.72
POLR2J3-220ENST00000613744 A0A087WUJ7 227 aa19.53■□□□□ 0.72
POLR2J3-220ENST00000613744 A0A0A6YYC8 382 aaPredicted RBP19.53■□□□□ 0.72
POLR2J3-220ENST00000613744 I3L1I5 382 aaPredicted RBP19.53■□□□□ 0.72
POLR2J3-220ENST00000613744 SMAD9O15198 467 aaKnown RBP19.53■□□□□ 0.72
POLR2J3-220ENST00000613744 EFSO43281 561 aa19.53■□□□□ 0.72
POLR2J3-220ENST00000613744 B3GALT2O43825 422 aa19.53■□□□□ 0.72
POLR2J3-220ENST00000613744 CD2P06729 351 aa19.53■□□□□ 0.72
POLR2J3-220ENST00000613744 JMJD7P0C870 316 aa19.53■□□□□ 0.72
POLR2J3-220ENST00000613744 ZNF28P17035 718 aa19.53■□□□□ 0.72
POLR2J3-220ENST00000613744 FSTP19883 344 aa19.53■□□□□ 0.72
POLR2J3-220ENST00000613744 ZNF10P21506 573 aaPredicted RBP19.53■□□□□ 0.72
POLR2J3-220ENST00000613744 LAP3P28838 519 aa19.53■□□□□ 0.72
POLR2J3-220ENST00000613744 CDKN2AP42771 156 aaKnown RBP19.53■□□□□ 0.72
POLR2J3-220ENST00000613744 DEFA6Q01524 100 aa19.53■□□□□ 0.72
POLR2J3-220ENST00000613744 DHRS11Q6UWP2 260 aa19.53■□□□□ 0.72
POLR2J3-220ENST00000613744 PRSS35Q8N3Z0 413 aa19.53■□□□□ 0.72
POLR2J3-220ENST00000613744 HOXB13Q92826 284 aaPredicted RBP19.53■□□□□ 0.72
POLR2J3-220ENST00000613744 MESP1Q9BRJ9 268 aa19.53■□□□□ 0.72
POLR2J3-220ENST00000613744 RPS10P5Q9NQ39 176 aa19.53■□□□□ 0.72
POLR2J3-220ENST00000613744 ASPMQ8IZT6 3477 aa19.53■□□□□ 0.72
POLR2J3-220ENST00000613744 SPTBN2O15020 2390 aa19.53■□□□□ 0.72
POLR2J3-220ENST00000613744 MEGF11A6BM72 1044 aa19.53■□□□□ 0.72
POLR2J3-220ENST00000613744 LDLRAD4O15165 306 aa19.53■□□□□ 0.72
POLR2J3-220ENST00000613744 STK17BO94768 372 aa19.53■□□□□ 0.72
POLR2J3-220ENST00000613744 NKX2-2O95096 273 aa19.53■□□□□ 0.72
POLR2J3-220ENST00000613744 TXNDC12O95881 172 aa19.53■□□□□ 0.72
POLR2J3-220ENST00000613744 ALOX5APP20292 161 aa19.53■□□□□ 0.72
POLR2J3-220ENST00000613744 SERPINF1P36955 418 aa19.53■□□□□ 0.72
POLR2J3-220ENST00000613744 KIR3DL2P43630 455 aa19.53■□□□□ 0.72
POLR2J3-220ENST00000613744 TTLL10Q6ZVT0 673 aa19.53■□□□□ 0.72
POLR2J3-220ENST00000613744 LSRQ86X29 649 aaPredicted RBP19.53■□□□□ 0.72
POLR2J3-220ENST00000613744 PPP1R3BQ86XI6 285 aa19.53■□□□□ 0.72
POLR2J3-220ENST00000613744 RRNAD1Q96FB5 475 aaKnown RBP19.53■□□□□ 0.72
POLR2J3-220ENST00000613744 LIN37Q96GY3 246 aaPredicted RBP19.53■□□□□ 0.72
POLR2J3-220ENST00000613744 PFDN5Q99471 154 aa19.53■□□□□ 0.72
POLR2J3-220ENST00000613744 GGACTQ9BVM4 153 aa19.53■□□□□ 0.72
POLR2J3-220ENST00000613744 RAB6AP20340 208 aa19.52■□□□□ 0.72
POLR2J3-220ENST00000613744 RUNX2Q13950 521 aa19.52■□□□□ 0.72
POLR2J3-220ENST00000613744 EMC4Q5J8M3 183 aa19.52■□□□□ 0.72
POLR2J3-220ENST00000613744 C1orf189Q5VU69 101 aa19.52■□□□□ 0.72
POLR2J3-220ENST00000613744 OR51A4Q8NGJ6 313 aa19.52■□□□□ 0.72
POLR2J3-220ENST00000613744 LYPD6BQ8NI32 183 aa19.52■□□□□ 0.72
POLR2J3-220ENST00000613744 AQP3Q92482 292 aa19.52■□□□□ 0.72
POLR2J3-220ENST00000613744 TOLLIPQ9H0E2 274 aa19.52■□□□□ 0.72
POLR2J3-220ENST00000613744 CKLFQ9UBR5 152 aa19.52■□□□□ 0.72
POLR2J3-220ENST00000613744 PTPRBP23467 1997 aa19.52■□□□□ 0.71
POLR2J3-220ENST00000613744 CCDC187A0A096LP49 1063 aa19.52■□□□□ 0.71
POLR2J3-220ENST00000613744 ACKR3P25106 362 aa19.52■□□□□ 0.71
POLR2J3-220ENST00000613744 GABRA3P34903 492 aa19.52■□□□□ 0.71
POLR2J3-220ENST00000613744 GPX4P36969 197 aaPredicted RBP19.52■□□□□ 0.71
POLR2J3-220ENST00000613744 DNLZQ5SXM8 178 aa19.52■□□□□ 0.71
POLR2J3-220ENST00000613744 KIRREL2Q6UWL6 708 aa19.52■□□□□ 0.71
POLR2J3-220ENST00000613744 RHOUQ7L0Q8 258 aa19.52■□□□□ 0.71
POLR2J3-220ENST00000613744 KCTD9Q7L273 389 aa19.52■□□□□ 0.71
POLR2J3-220ENST00000613744 SLC29A4Q7RTT9 530 aa19.52■□□□□ 0.71
POLR2J3-220ENST00000613744 ARHGEF39Q8N4T4 335 aa19.52■□□□□ 0.71
POLR2J3-220ENST00000613744 SLC38A9Q8NBW4 561 aa19.52■□□□□ 0.71
POLR2J3-220ENST00000613744 MRPS33Q9Y291 106 aaKnown RBP19.52■□□□□ 0.71
POLR2J3-220ENST00000613744 B3GALT1Q9Y5Z6 326 aa19.52■□□□□ 0.71
POLR2J3-220ENST00000613744 SCRG1O75711 98 aa19.51■□□□□ 0.71
POLR2J3-220ENST00000613744 PET100P0DJ07 73 aa19.51■□□□□ 0.71
POLR2J3-220ENST00000613744 EMDP50402 254 aa19.51■□□□□ 0.71
POLR2J3-220ENST00000613744 MAMDC2Q7Z304 686 aaPredicted RBP19.51■□□□□ 0.71
POLR2J3-220ENST00000613744 STX12Q86Y82 276 aa19.51■□□□□ 0.71
POLR2J3-220ENST00000613744 LIPHQ8WWY8 451 aa19.51■□□□□ 0.71
POLR2J3-220ENST00000613744 GTF3AQ92664 365 aaKnown RBP19.51■□□□□ 0.71
POLR2J3-220ENST00000613744 MRGPRFQ96AM1 343 aa19.51■□□□□ 0.71
POLR2J3-220ENST00000613744 RAB3CQ96E17 227 aa19.51■□□□□ 0.71
POLR2J3-220ENST00000613744 KCNK15Q9H427 330 aa19.51■□□□□ 0.71
POLR2J3-220ENST00000613744 RAB18Q9NP72 206 aa19.51■□□□□ 0.71
POLR2J3-220ENST00000613744 CUTCQ9NTM9 273 aa19.51■□□□□ 0.71
POLR2J3-220ENST00000613744 KCNG2Q9UJ96 466 aa19.51■□□□□ 0.71
POLR2J3-220ENST00000613744 TMED7Q9Y3B3 224 aa19.51■□□□□ 0.71
POLR2J3-220ENST00000613744 A0A1B0GTH9 108 aa19.5■□□□□ 0.71
POLR2J3-220ENST00000613744 MED6O75586 246 aa19.5■□□□□ 0.71
POLR2J3-220ENST00000613744 IFNA17P01571 189 aa19.5■□□□□ 0.71
POLR2J3-220ENST00000613744 ERCC1P07992 297 aaPredicted RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms