RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 PDCD1Q15116 288 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 ISXQ2M1V0 245 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 ZNF660Q6AZW8 331 aaPredicted RBP6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 TCEAL6Q6IPX3 200 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 CPEB2Q7Z5Q1 589 aaKnown RBP6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 NAXDQ8IW45 347 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 OR5M8Q8NGP6 311 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 GPX8Q8TED1 209 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 FGF11Q92914 225 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 TAF9BQ9HBM6 251 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 B3GALT5Q9Y2C3 310 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 FRMPD3Q5JV73 1810 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 NOTCH4Q99466 2003 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 MDC1Q14676 2089 aaKnown RBP6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 MED19A0JLT2 244 aaPredicted RBP6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 BET1O15155 118 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 B3GALNT1O75752 331 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 AQP8O94778 261 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 CPT2P23786 658 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 OR3A4PP47883 348 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 STK11Q15831 433 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 LPAL2Q16609 132 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 PCK2Q16822 640 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 SP6Q3SY56 376 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 STPG2Q8N412 459 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 CLEC1AQ8NC01 280 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 CLRN3Q8NCR9 226 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 ADAD2Q8NCV1 583 aaKnown RBP6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 OR5L1Q8NGL2 311 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 OR10Z1Q8NGY1 313 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 SYT3Q9BQG1 590 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 ZNF2Q9BSG1 426 aaPredicted RBP6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 NICN1Q9BSH3 213 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 NPDC1Q9NQX5 325 aaPredicted RBP6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 ZNF275Q9NSD4 429 aaPredicted RBP6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 PUS1Q9Y606 427 aaKnown RBP eCLIP6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 CEP250Q9BV73 2442 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 COL4A6Q14031 1691 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 TRBV5-5A0A0J9YX44 114 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 HSPB2A8KAH6 182 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 LMO7DNF2Z398 122 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 SOCS1O15524 211 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 XRCC2O43543 280 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 NME2P1O60361 137 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 LRP3O75074 770 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 F12P00748 615 aaPredicted RBP6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 APOC1P02654 83 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 RPA2P15927 270 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 HTR5AP47898 357 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 HSPB2Q16082 182 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 ZNF529Q6P280 563 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 BRICD5Q6PL45 260 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 FBXW12Q6X9E4 464 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 MOB3CQ70IA8 216 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 C9orf40Q8IXQ3 194 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 ESX1Q8N693 406 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 OR10G3Q8NGC4 313 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 OR6K3Q8NGY3 331 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 C14orf79Q96F83 325 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 LIN37Q96GY3 246 aaPredicted RBP6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 TIMP4Q99727 224 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 BIN3Q9NQY0 253 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 PIPOXQ9P0Z9 390 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 PLXND1Q9Y4D7 1925 aa6.13□□□□□ -1.43
SYNPO2-206ENST00000610556 A0A1W2PP11 408 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 CDK2AP1O14519 115 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 TMEM127O75204 238 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 BGLAPP02818 100 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 P04436 131 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 NME1P15531 152 aaKnown RBP6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 ARL6IP1Q15041 203 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 ACTBL2Q562R1 376 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 PGAP1Q75T13 922 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 RAB11FIP2Q7L804 512 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 CBLN2Q8IUK8 224 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 ZNF695Q8IW36 515 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 C20orf196Q8IYI0 205 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 FAM213BQ8TBF2 198 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 ST8SIA1Q92185 356 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 ADAT3Q96EY9 351 aaPredicted RBP6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 SHDQ96IW2 340 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 KLHDC3Q9BQ90 382 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 TMPRSS13Q9BYE2 586 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 NMNAT2Q9BZQ4 307 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 C1orf123Q9NWV4 160 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 KLK13Q9UKR3 277 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 VSIG4Q9Y279 399 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 SLCO1B1Q9Y6L6 691 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 RPS10-NUDT3A0A1W2PQS6 291 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 A6NCN8 305 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 EPOPA6NHQ4 379 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 LILRA5A6NI73 299 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 CNOT4O95628 575 aaKnown RBP6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 BPNT1O95861 308 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 FREM3P0C091 2139 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 LINC00271P0C7V0 271 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 CSF2RBP32927 897 aa6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 AFF3P51826 1226 aaKnown RBP6.12□□□□□ -1.43
SYNPO2-206ENST00000610556 GPR85P60893 370 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms