RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 EDEM2Q9BV94 578 aa12.81□□□□□ -0.36
PCDHB16-201ENST00000609684 A0A1B0GTH9 108 aa12.81□□□□□ -0.36
PCDHB16-201ENST00000609684 DFFBO76075 338 aa12.81□□□□□ -0.36
PCDHB16-201ENST00000609684 HPNP05981 417 aa12.81□□□□□ -0.36
PCDHB16-201ENST00000609684 GALP22466 123 aa12.81□□□□□ -0.36
PCDHB16-201ENST00000609684 FCGR2CP31995 323 aa12.81□□□□□ -0.36
PCDHB16-201ENST00000609684 HAAOP46952 286 aa12.81□□□□□ -0.36
PCDHB16-201ENST00000609684 WIPI1Q5MNZ9 446 aaPredicted RBP12.81□□□□□ -0.36
PCDHB16-201ENST00000609684 ANKRD37Q7Z713 158 aa12.81□□□□□ -0.36
PCDHB16-201ENST00000609684 BORCS7Q96B45 105 aa12.81□□□□□ -0.36
PCDHB16-201ENST00000609684 SARAFQ96BY9 339 aa12.81□□□□□ -0.36
PCDHB16-201ENST00000609684 ST3GAL6Q9Y274 331 aa12.81□□□□□ -0.36
PCDHB16-201ENST00000609684 MN1Q10571 1320 aaPredicted RBP12.81□□□□□ -0.36
PCDHB16-201ENST00000609684 NTN1O95631 604 aa12.81□□□□□ -0.36
PCDHB16-201ENST00000609684 SELEP16581 610 aa12.81□□□□□ -0.36
PCDHB16-201ENST00000609684 MAGEB1P43366 347 aa12.81□□□□□ -0.36
PCDHB16-201ENST00000609684 SRSF5Q13243 272 aaKnown RBP12.81□□□□□ -0.36
PCDHB16-201ENST00000609684 SNTB1Q13884 538 aaKnown RBP12.81□□□□□ -0.36
PCDHB16-201ENST00000609684 ZNF573Q86YE8 665 aa12.81□□□□□ -0.36
PCDHB16-201ENST00000609684 OR2G3Q8NGZ4 309 aa12.81□□□□□ -0.36
PCDHB16-201ENST00000609684 ZPBPQ9BS86 351 aa12.81□□□□□ -0.36
PCDHB16-201ENST00000609684 PIGMQ9H3S5 423 aa12.81□□□□□ -0.36
PCDHB16-201ENST00000609684 PLK3Q9H4B4 646 aa12.81□□□□□ -0.36
PCDHB16-201ENST00000609684 TMEM9BQ9NQ34 198 aa12.81□□□□□ -0.36
PCDHB16-201ENST00000609684 NKX6-3A6NJ46 265 aa12.8□□□□□ -0.36
PCDHB16-201ENST00000609684 TXNL1O43396 289 aa12.8□□□□□ -0.36
PCDHB16-201ENST00000609684 MESP2Q0VG99 397 aa12.8□□□□□ -0.36
PCDHB16-201ENST00000609684 OR4S1Q8NGB4 309 aa12.8□□□□□ -0.36
PCDHB16-201ENST00000609684 ARID1AO14497 2285 aa12.8□□□□□ -0.36
PCDHB16-201ENST00000609684 TAF1LQ8IZX4 1826 aa12.8□□□□□ -0.36
PCDHB16-201ENST00000609684 BHLHE40O14503 412 aa12.8□□□□□ -0.36
PCDHB16-201ENST00000609684 ICMTO60725 284 aa12.8□□□□□ -0.36
PCDHB16-201ENST00000609684 TESK1Q15569 626 aa12.8□□□□□ -0.36
PCDHB16-201ENST00000609684 FOXB1Q99853 325 aa12.8□□□□□ -0.36
PCDHB16-201ENST00000609684 PYCARD-AS1I3L0S3 204 aa12.8□□□□□ -0.36
PCDHB16-201ENST00000609684 RAB27BO00194 218 aa12.8□□□□□ -0.36
PCDHB16-201ENST00000609684 ANGPTL7O43827 346 aa12.8□□□□□ -0.36
PCDHB16-201ENST00000609684 RAB11AP62491 216 aa12.8□□□□□ -0.36
PCDHB16-201ENST00000609684 SSBP1Q04837 148 aaKnown RBP12.8□□□□□ -0.36
PCDHB16-201ENST00000609684 ZNF468Q5VIY5 522 aaPredicted RBP12.8□□□□□ -0.36
PCDHB16-201ENST00000609684 ZDHHC23Q8IYP9 409 aa12.8□□□□□ -0.36
PCDHB16-201ENST00000609684 GHRLQ9UBU3 117 aa12.8□□□□□ -0.36
PCDHB16-201ENST00000609684 SLC23A1Q9UHI7 598 aa12.8□□□□□ -0.36
PCDHB16-201ENST00000609684 ATAD5Q96QE3 1844 aa12.8□□□□□ -0.36
PCDHB16-201ENST00000609684 PSG6Q00889 435 aa12.8□□□□□ -0.36
PCDHB16-201ENST00000609684 FAM122BQ7Z309 247 aa12.8□□□□□ -0.36
PCDHB16-201ENST00000609684 LYG2Q86SG7 212 aa12.8□□□□□ -0.36
PCDHB16-201ENST00000609684 SFT2D1Q8WV19 159 aa12.8□□□□□ -0.36
PCDHB16-201ENST00000609684 CFHR5Q9BXR6 569 aa12.8□□□□□ -0.36
PCDHB16-201ENST00000609684 NRXN2Q9P2S2 1712 aa12.79□□□□□ -0.36
PCDHB16-201ENST00000609684 CABIN1Q9Y6J0 2220 aa12.79□□□□□ -0.36
PCDHB16-201ENST00000609684 LRRC30A6NM36 301 aa12.79□□□□□ -0.36
PCDHB16-201ENST00000609684 SPRY1O43609 319 aaPredicted RBP12.79□□□□□ -0.36
PCDHB16-201ENST00000609684 EXOSC2Q13868 293 aaKnown RBP12.79□□□□□ -0.36
PCDHB16-201ENST00000609684 ARHGEF39Q8N4T4 335 aa12.79□□□□□ -0.36
PCDHB16-201ENST00000609684 ZNF680Q8NEM1 530 aa12.79□□□□□ -0.36
PCDHB16-201ENST00000609684 MAFAQ8NHW3 353 aaPredicted RBP12.79□□□□□ -0.36
PCDHB16-201ENST00000609684 TAAR9Q96RI9 348 aa12.79□□□□□ -0.36
PCDHB16-201ENST00000609684 PLXNB2O15031 1838 aa12.79□□□□□ -0.36
PCDHB16-201ENST00000609684 ZNF705FA8MVS1 300 aaPredicted RBP12.79□□□□□ -0.36
PCDHB16-201ENST00000609684 SH2D1BO14796 132 aa12.79□□□□□ -0.36
PCDHB16-201ENST00000609684 SPINT1O43278 529 aa12.79□□□□□ -0.36
PCDHB16-201ENST00000609684 SSX4O60224 188 aa12.79□□□□□ -0.36
PCDHB16-201ENST00000609684 IL2RAP01589 272 aa12.79□□□□□ -0.36
PCDHB16-201ENST00000609684 ZNF705DP0CH99 300 aaPredicted RBP12.79□□□□□ -0.36
PCDHB16-201ENST00000609684 ZNF705BP0CI00 300 aaPredicted RBP12.79□□□□□ -0.36
PCDHB16-201ENST00000609684 EPHA8P29322 1005 aaPredicted RBP12.79□□□□□ -0.36
PCDHB16-201ENST00000609684 IL11RAQ14626 422 aa12.79□□□□□ -0.36
PCDHB16-201ENST00000609684 LSRQ86X29 649 aaPredicted RBP12.79□□□□□ -0.36
PCDHB16-201ENST00000609684 ST8SIA4Q92187 359 aa12.79□□□□□ -0.36
PCDHB16-201ENST00000609684 TINAGL1Q9GZM7 467 aaPredicted RBP12.79□□□□□ -0.36
PCDHB16-201ENST00000609684 RER1O15258 196 aa12.79□□□□□ -0.36
PCDHB16-201ENST00000609684 AGFG1P52594 562 aaKnown RBP12.79□□□□□ -0.36
PCDHB16-201ENST00000609684 TMEM268Q5VZI3 342 aa12.79□□□□□ -0.36
PCDHB16-201ENST00000609684 RELL2Q8NC24 303 aaPredicted RBP12.79□□□□□ -0.36
PCDHB16-201ENST00000609684 PP6455Q8WZ26 134 aa12.79□□□□□ -0.36
PCDHB16-201ENST00000609684 NIPSNAP3BQ9BS92 247 aa12.79□□□□□ -0.36
PCDHB16-201ENST00000609684 PPP1R3CQ9UQK1 317 aa12.79□□□□□ -0.36
PCDHB16-201ENST00000609684 MEIKINA0A087WXM9 373 aa12.79□□□□□ -0.36
PCDHB16-201ENST00000609684 ZNF816-ZNF321PA0A0X1KG74 233 aa12.79□□□□□ -0.36
PCDHB16-201ENST00000609684 SLC22A20A6NK97 555 aa12.79□□□□□ -0.36
PCDHB16-201ENST00000609684 NDUFB7P17568 137 aa12.79□□□□□ -0.36
PCDHB16-201ENST00000609684 THBS4P35443 961 aa12.79□□□□□ -0.36
PCDHB16-201ENST00000609684 ZNF85Q03923 595 aa12.79□□□□□ -0.36
PCDHB16-201ENST00000609684 H3F3CQ6NXT2 135 aa12.79□□□□□ -0.36
PCDHB16-201ENST00000609684 H2BFWTQ7Z2G1 175 aa12.79□□□□□ -0.36
PCDHB16-201ENST00000609684 TCTE3Q8IZS6 198 aa12.79□□□□□ -0.36
PCDHB16-201ENST00000609684 ZNF808Q8N4W9 903 aaPredicted RBP12.79□□□□□ -0.36
PCDHB16-201ENST00000609684 WDR89Q96FK6 387 aaPredicted RBP12.79□□□□□ -0.36
PCDHB16-201ENST00000609684 UHRF2Q96PU4 802 aa12.79□□□□□ -0.36
PCDHB16-201ENST00000609684 C19orf12Q9NSK7 152 aa12.79□□□□□ -0.36
PCDHB16-201ENST00000609684 KCNIP4Q6PIL6 250 aa12.78□□□□□ -0.36
PCDHB16-201ENST00000609684 C17orf107Q6ZR85 190 aa12.78□□□□□ -0.36
PCDHB16-201ENST00000609684 NLRC3Q7RTR2 1065 aa12.78□□□□□ -0.36
PCDHB16-201ENST00000609684 TMEM229BQ8NBD8 167 aa12.78□□□□□ -0.36
PCDHB16-201ENST00000609684 CMTM3Q96MX0 182 aa12.78□□□□□ -0.36
PCDHB16-201ENST00000609684 P4HTMQ9NXG6 502 aa12.78□□□□□ -0.36
PCDHB16-201ENST00000609684 FLRT3Q9NZU0 649 aa12.78□□□□□ -0.36
PCDHB16-201ENST00000609684 PROCRQ9UNN8 238 aa12.78□□□□□ -0.36
PCDHB16-201ENST00000609684 COL11A1P12107 1806 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms