RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 SLC2A2P11168 524 aaPredicted RBP10.69□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 ELK1P19419 428 aa10.69□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 STOMP27105 288 aa10.69□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 HOXC12P31275 282 aa10.69□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 MAP2K3P46734 347 aa10.69□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 DEFA1P59665 94 aa10.69□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 DEFA3P59666 94 aa10.69□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 MRPS10P82664 201 aaKnown RBP10.69□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 PITPNAQ00169 270 aa10.69□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 OR8B8Q15620 311 aa10.69□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 FAM189A2Q15884 450 aa10.69□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 RAB11BQ15907 218 aa10.69□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 GABRA6Q16445 453 aa10.69□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 RGS21Q2M5E4 152 aa10.69□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 PYHIN1Q6K0P9 492 aa10.69□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 FAM131AQ6UXB0 335 aa10.69□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 COMMD2Q86X83 199 aa10.69□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 C1orf174Q8IYL3 243 aa10.69□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 GCNT2Q8N0V5 402 aa10.69□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 CNEP1R1Q8N9A8 125 aa10.69□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 KDF1Q8NAX2 398 aaPredicted RBP10.69□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 CPEB3Q8NE35 698 aaKnown RBP10.69□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 LGALS14Q8TCE9 139 aa10.69□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 SSC4DQ8WTU2 575 aa10.69□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 FGGYQ96C11 551 aa10.69□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 STARD4Q96DR4 205 aa10.69□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 ADAT3Q96EY9 351 aaPredicted RBP10.69□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 POM121L2Q96KW2 1035 aa10.69□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 LYZL4Q96KX0 146 aa10.69□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 SDHCQ99643 169 aaPredicted RBP10.69□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 PRORYQ9H606 182 aa10.69□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 TBCCD1Q9NVR7 557 aa10.69□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 AMDHD2Q9Y303 409 aa10.69□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 RTTNQ86VV8 2226 aa10.69□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 CELSR3Q9NYQ7 3312 aa10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 LOC100289279A0A1B0GTE1 492 aa10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 hCG_38984A0A1B0GV85 526 aa10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 C1QTNF9BB2RNN3 333 aa10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 FAM25AB3EWG3 89 aa10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 FAM25CB3EWG5 89 aa10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 FAM25GB3EWG6 89 aa10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 TBX1O43435 398 aa10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 SCGNO76038 276 aa10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 HLA-HP01893 362 aa10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 LCATP04180 440 aa10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 DBHP09172 617 aa10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 FAM87AP0C7U9 286 aa10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 C1QTNF9P0C862 333 aa10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 UBBP0CG47 229 aa10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 PRF1P14222 555 aa10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 RAB6AP20340 208 aa10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 HTR2CP28335 458 aa10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 OPRM1P35372 400 aa10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 APLNRP35414 380 aa10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 ALDH3B1P43353 468 aa10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 PITPNBP48739 271 aa10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 ART1P52961 327 aa10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 FOXG1P55316 489 aaPredicted RBP10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 UBE2NP61088 152 aaKnown RBP10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 HGFACQ04756 655 aa10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 RIPPLY1Q0D2K3 151 aa10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 MRPL49Q13405 166 aaKnown RBP10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 SFRP5Q5T4F7 317 aa10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 TMEM42Q69YG0 159 aa10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 VWA1Q6PCB0 445 aa10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 BTLAQ7Z6A9 289 aa10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 LYSMD2Q8IV50 215 aa10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 SEMA6DQ8NFY4 1073 aa10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 CHPT1Q8WUD6 406 aa10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 SPSB1Q96BD6 273 aa10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 SGK3Q96BR1 496 aa10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 HAVCR1Q96D42 359 aa10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 SNRNP40Q96DI7 357 aaKnown RBP10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 REEP6Q96HR9 211 aa10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 NUDT16L1Q9BRJ7 211 aaKnown RBP10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 ZNF71Q9NQZ8 489 aaPredicted RBP10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 EXTL2Q9UBQ6 330 aa10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 GHRLQ9UBU3 117 aa10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 OR5V1Q9UGF6 321 aa10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 RHBDD3Q9Y3P4 386 aa10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 ASPMQ8IZT6 3477 aa10.68□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 CFAP47Q6ZTR5 3102 aa10.67□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 LOC100509620A0A075B734 347 aa10.67□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 A0A096LPE4 126 aa10.67□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 A0A1W2PPZ6 126 aa10.67□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 CIB4A0PJX0 185 aa10.67□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 MSTNO14793 375 aa10.67□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 MAGEB3O15480 346 aa10.67□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 TOXO94900 526 aa10.67□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 BPNT1O95861 308 aa10.67□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 PTTG1O95997 202 aa10.67□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 IGKV3-15P01624 115 aa10.67□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 EIF4EP06730 217 aaKnown RBP10.67□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 PATE4P0C8F1 98 aa10.67□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 CD79AP11912 226 aa10.67□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 SNRPBP14678 240 aaKnown RBP10.67□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 CBR1P16152 277 aa10.67□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 ZNF14P17017 642 aaPredicted RBP10.67□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 MALLQ13021 153 aa10.67□□□□□ -0.7
NEDD8-MDP1-203ENST00000604306 CNN3Q15417 329 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms