RNA–Protein interactions for RNA: ENST00000602888.5

UBE2E3-212, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 2

Gene UBE2E3, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-212ENST00000602888 GCNT4Q9P109 453 aa2.3□□□□□ -2.04
UBE2E3-212ENST00000602888 RRP15Q9Y3B9 282 aaKnown RBP2.3□□□□□ -2.04
UBE2E3-212ENST00000602888 UBN2Q6ZU65 1347 aa2.3□□□□□ -2.04
UBE2E3-212ENST00000602888 SEC16AO15027 2179 aa2.3□□□□□ -2.04
UBE2E3-212ENST00000602888 SHROOM3Q8TF72 1996 aa2.29□□□□□ -2.04
UBE2E3-212ENST00000602888 A0A075B6Q4 140 aa2.29□□□□□ -2.04
UBE2E3-212ENST00000602888 IGKV2-24A0A0C4DH68 120 aa2.29□□□□□ -2.04
UBE2E3-212ENST00000602888 KBTBD11-OT1A0A1B0GTJ5 212 aa2.29□□□□□ -2.04
UBE2E3-212ENST00000602888 TSPAN11A1L157 253 aa2.29□□□□□ -2.04
UBE2E3-212ENST00000602888 CBR3O75828 277 aa2.29□□□□□ -2.04
UBE2E3-212ENST00000602888 GATBO75879 557 aaKnown RBP2.29□□□□□ -2.04
UBE2E3-212ENST00000602888 LHBP01229 141 aa2.29□□□□□ -2.04
UBE2E3-212ENST00000602888 MT-ND4P03905 459 aa2.29□□□□□ -2.04
UBE2E3-212ENST00000602888 ERCC1P07992 297 aaPredicted RBP2.29□□□□□ -2.04
UBE2E3-212ENST00000602888 CLTAP09496 248 aa2.29□□□□□ -2.04
UBE2E3-212ENST00000602888 CTRB1P17538 263 aa2.29□□□□□ -2.04
UBE2E3-212ENST00000602888 CD34P28906 385 aa2.29□□□□□ -2.04
UBE2E3-212ENST00000602888 FABP6P51161 128 aa2.29□□□□□ -2.04
UBE2E3-212ENST00000602888 RBX1P62877 108 aa2.29□□□□□ -2.04
UBE2E3-212ENST00000602888 ZNF829Q3KNS6 432 aaPredicted RBP2.29□□□□□ -2.04
UBE2E3-212ENST00000602888 GCSAMLQ5JQS6 135 aa2.29□□□□□ -2.04
UBE2E3-212ENST00000602888 TWF2Q6IBS0 349 aaKnown RBP2.29□□□□□ -2.04
UBE2E3-212ENST00000602888 LUZP2Q86TE4 346 aa2.29□□□□□ -2.04
UBE2E3-212ENST00000602888 BBS5Q8N3I7 341 aa2.29□□□□□ -2.04
UBE2E3-212ENST00000602888 C1orf64Q8NEQ6 169 aa2.29□□□□□ -2.04
UBE2E3-212ENST00000602888 BPIFCQ8NFQ6 507 aa2.29□□□□□ -2.04
UBE2E3-212ENST00000602888 RXFP4Q8TDU9 374 aa2.29□□□□□ -2.04
UBE2E3-212ENST00000602888 CPNE4Q96A23 557 aaPredicted RBP2.29□□□□□ -2.04
UBE2E3-212ENST00000602888 RPEQ96AT9 228 aa2.29□□□□□ -2.04
UBE2E3-212ENST00000602888 SGTBQ96EQ0 304 aa2.29□□□□□ -2.04
UBE2E3-212ENST00000602888 KCNS1Q96KK3 526 aa2.29□□□□□ -2.04
UBE2E3-212ENST00000602888 ZFP3Q96NJ6 502 aa2.29□□□□□ -2.04
UBE2E3-212ENST00000602888 DHX35Q9H5Z1 703 aaKnown RBP2.29□□□□□ -2.04
UBE2E3-212ENST00000602888 CLN8Q9UBY8 286 aa2.29□□□□□ -2.04
UBE2E3-212ENST00000602888 HES2Q9Y543 173 aa2.29□□□□□ -2.04
UBE2E3-212ENST00000602888 SAR1BQ9Y6B6 198 aa2.29□□□□□ -2.04
UBE2E3-212ENST00000602888 IGKV1-27A0A075B6S5 117 aa2.28□□□□□ -2.04
UBE2E3-212ENST00000602888 CEACAM18A8MTB9 384 aa2.28□□□□□ -2.04
UBE2E3-212ENST00000602888 HSPD1P10809 573 aaKnown RBP2.28□□□□□ -2.04
UBE2E3-212ENST00000602888 TGFBR1P36897 503 aa2.28□□□□□ -2.04
UBE2E3-212ENST00000602888 RFC3P40938 356 aa2.28□□□□□ -2.04
UBE2E3-212ENST00000602888 TNFSF9P41273 254 aa2.28□□□□□ -2.04
UBE2E3-212ENST00000602888 C16orf47Q6ZP98 133 aaPredicted RBP2.28□□□□□ -2.04
UBE2E3-212ENST00000602888 EIF3MQ7L2H7 374 aaKnown RBP2.28□□□□□ -2.04
UBE2E3-212ENST00000602888 SSX9Q7RTT3 188 aa2.28□□□□□ -2.04
UBE2E3-212ENST00000602888 OR1L1Q8NH94 360 aa2.28□□□□□ -2.04
UBE2E3-212ENST00000602888 RERGQ96A58 199 aaPredicted RBP2.28□□□□□ -2.04
UBE2E3-212ENST00000602888 KCNS3Q9BQ31 491 aa2.28□□□□□ -2.04
UBE2E3-212ENST00000602888 C1orf50Q9BV19 199 aa2.28□□□□□ -2.04
UBE2E3-212ENST00000602888 NUDT9Q9BW91 350 aa2.28□□□□□ -2.04
UBE2E3-212ENST00000602888 CSNK1G1Q9HCP0 422 aa2.28□□□□□ -2.04
UBE2E3-212ENST00000602888 SIGLEC7Q9Y286 467 aa2.28□□□□□ -2.04
UBE2E3-212ENST00000602888 RCL1Q9Y2P8 373 aaKnown RBP2.28□□□□□ -2.04
UBE2E3-212ENST00000602888 TSPOAP1O95153 1857 aa2.27□□□□□ -2.05
UBE2E3-212ENST00000602888 KIR2DS1A0A191URI9 304 aa2.27□□□□□ -2.05
UBE2E3-212ENST00000602888 C16orf90A8MZG2 172 aa2.27□□□□□ -2.05
UBE2E3-212ENST00000602888 MANBAO00462 879 aa2.27□□□□□ -2.05
UBE2E3-212ENST00000602888 COL8A2P25067 703 aa2.27□□□□□ -2.05
UBE2E3-212ENST00000602888 BMI1P35226 326 aa2.27□□□□□ -2.05
UBE2E3-212ENST00000602888 PPICP45877 212 aa2.27□□□□□ -2.05
UBE2E3-212ENST00000602888 RPS11P62280 158 aaKnown RBP eCLIP2.27□□□□□ -2.05
UBE2E3-212ENST00000602888 IFITM3Q01628 133 aa2.27□□□□□ -2.05
UBE2E3-212ENST00000602888 MAD2L1BPQ15013 274 aaPredicted RBP2.27□□□□□ -2.05
UBE2E3-212ENST00000602888 TRMT5Q32P41 509 aaKnown RBP2.27□□□□□ -2.05
UBE2E3-212ENST00000602888 KLHL12Q53G59 568 aa2.27□□□□□ -2.05
UBE2E3-212ENST00000602888 MED27Q6P2C8 311 aa2.27□□□□□ -2.05
UBE2E3-212ENST00000602888 PRSS54Q6PEW0 395 aa2.27□□□□□ -2.05
UBE2E3-212ENST00000602888 TMEM220Q6QAJ8 160 aa2.27□□□□□ -2.05
UBE2E3-212ENST00000602888 DEGS2Q6QHC5 323 aa2.27□□□□□ -2.05
UBE2E3-212ENST00000602888 CD300LGQ6UXG3 332 aa2.27□□□□□ -2.05
UBE2E3-212ENST00000602888 BZW1Q7L1Q6 419 aaKnown RBP2.27□□□□□ -2.05
UBE2E3-212ENST00000602888 OR10W1Q8NGF6 305 aa2.27□□□□□ -2.05
UBE2E3-212ENST00000602888 TSEN15Q8WW01 171 aaKnown RBP2.27□□□□□ -2.05
UBE2E3-212ENST00000602888 UQCC2Q9BRT2 126 aa2.27□□□□□ -2.05
UBE2E3-212ENST00000602888 MARVELD1Q9BSK0 173 aa2.27□□□□□ -2.05
UBE2E3-212ENST00000602888 CALN1Q9BXU9 219 aa2.27□□□□□ -2.05
UBE2E3-212ENST00000602888 ZNF442Q9H7R0 627 aa2.27□□□□□ -2.05
UBE2E3-212ENST00000602888 CCNB1IP1Q9NPC3 277 aa2.27□□□□□ -2.05
UBE2E3-212ENST00000602888 C20orf96Q9NUD7 363 aaPredicted RBP2.27□□□□□ -2.05
UBE2E3-212ENST00000602888 LRRC42Q9Y546 428 aa2.27□□□□□ -2.05
UBE2E3-212ENST00000602888 COMMD3-BMI1R4GMX3 469 aa2.27□□□□□ -2.05
UBE2E3-212ENST00000602888 KCNE1BA0A087WTH5 132 aa2.26□□□□□ -2.05
UBE2E3-212ENST00000602888 ANKRD65E5RJM6 399 aa2.26□□□□□ -2.05
UBE2E3-212ENST00000602888 TGM6O95932 706 aa2.26□□□□□ -2.05
UBE2E3-212ENST00000602888 IGKV1D-16P01601 117 aa2.26□□□□□ -2.05
UBE2E3-212ENST00000602888 HLA-HP01893 362 aa2.26□□□□□ -2.05
UBE2E3-212ENST00000602888 RPN2P04844 631 aa2.26□□□□□ -2.05
UBE2E3-212ENST00000602888 NTF3P20783 257 aa2.26□□□□□ -2.05
UBE2E3-212ENST00000602888 PCK1P35558 622 aa2.26□□□□□ -2.05
UBE2E3-212ENST00000602888 MPV17P39210 176 aa2.26□□□□□ -2.05
UBE2E3-212ENST00000602888 IDH2P48735 452 aaKnown RBP2.26□□□□□ -2.05
UBE2E3-212ENST00000602888 MEF2BQ02080 365 aaPredicted RBP2.26□□□□□ -2.05
UBE2E3-212ENST00000602888 BAMBIQ13145 260 aa2.26□□□□□ -2.05
UBE2E3-212ENST00000602888 TAF9Q16594 264 aa2.26□□□□□ -2.05
UBE2E3-212ENST00000602888 SPIN3Q5JUX0 258 aa2.26□□□□□ -2.05
UBE2E3-212ENST00000602888 OPN5Q6U736 354 aa2.26□□□□□ -2.05
UBE2E3-212ENST00000602888 TMPRSS11AQ6ZMR5 421 aa2.26□□□□□ -2.05
UBE2E3-212ENST00000602888 ZNF680Q8NEM1 530 aa2.26□□□□□ -2.05
UBE2E3-212ENST00000602888 OR2Z1Q8NG97 314 aa2.26□□□□□ -2.05
UBE2E3-212ENST00000602888 OR56A4Q8NGH8 313 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms