RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 IFITM5A6NNB3 132 aa22.55■■□□□ 1.2
SCAMP4-210ENST00000588555 IGKV3-15P01624 115 aa22.55■■□□□ 1.2
SCAMP4-210ENST00000588555 CBR1P16152 277 aa22.55■■□□□ 1.2
SCAMP4-210ENST00000588555 S100A5P33763 92 aa22.55■■□□□ 1.2
SCAMP4-210ENST00000588555 DDOSTP39656 456 aa22.55■■□□□ 1.2
SCAMP4-210ENST00000588555 LAX1Q8IWV1 398 aa22.55■■□□□ 1.2
SCAMP4-210ENST00000588555 RELL2Q8NC24 303 aaPredicted RBP22.55■■□□□ 1.2
SCAMP4-210ENST00000588555 CCDC54Q8NEL0 328 aa22.55■■□□□ 1.2
SCAMP4-210ENST00000588555 ACOT12Q8WYK0 555 aa22.55■■□□□ 1.2
SCAMP4-210ENST00000588555 SPSB4Q96A44 273 aa22.55■■□□□ 1.2
SCAMP4-210ENST00000588555 RGCCQ9H4X1 137 aa22.55■■□□□ 1.2
SCAMP4-210ENST00000588555 JKAMPQ9P055 326 aa22.55■■□□□ 1.2
SCAMP4-210ENST00000588555 EEF1E1-BLOC1S5C9J1V9 151 aa22.54■■□□□ 1.2
SCAMP4-210ENST00000588555 AIPO00170 330 aa22.54■■□□□ 1.2
SCAMP4-210ENST00000588555 EEF1E1O43324 174 aaKnown RBP22.54■■□□□ 1.2
SCAMP4-210ENST00000588555 WNT5AP41221 380 aa22.54■■□□□ 1.2
SCAMP4-210ENST00000588555 CASP6P55212 293 aa22.54■■□□□ 1.2
SCAMP4-210ENST00000588555 TMEM211Q6ICI0 200 aa22.54■■□□□ 1.2
SCAMP4-210ENST00000588555 RND1Q92730 232 aa22.54■■□□□ 1.2
SCAMP4-210ENST00000588555 ABCB9Q9NP78 766 aa22.54■■□□□ 1.2
SCAMP4-210ENST00000588555 CMAHPQ9Y471 501 aa22.54■■□□□ 1.2
SCAMP4-210ENST00000588555 ANXA2P2A6NMY6 339 aa22.53■■□□□ 1.2
SCAMP4-210ENST00000588555 RGS5O15539 181 aa22.53■■□□□ 1.2
SCAMP4-210ENST00000588555 CD37P11049 281 aa22.53■■□□□ 1.2
SCAMP4-210ENST00000588555 ZNF20P17024 532 aa22.53■■□□□ 1.2
SCAMP4-210ENST00000588555 IDH3GP51553 393 aaPredicted RBP22.53■■□□□ 1.2
SCAMP4-210ENST00000588555 ZNF92Q03936 586 aa22.53■■□□□ 1.2
SCAMP4-210ENST00000588555 DDI2Q5TDH0 399 aa22.53■■□□□ 1.2
SCAMP4-210ENST00000588555 APOBEC3DQ96AK3 386 aaPredicted RBP22.53■■□□□ 1.2
SCAMP4-210ENST00000588555 WDFY2Q96P53 400 aa22.53■■□□□ 1.2
SCAMP4-210ENST00000588555 COMMD3Q9UBI1 195 aa22.53■■□□□ 1.2
SCAMP4-210ENST00000588555 NBASA2RRP1 2371 aa22.53■■□□□ 1.2
SCAMP4-210ENST00000588555 DHRS7CA6NNS2 312 aa22.53■■□□□ 1.2
SCAMP4-210ENST00000588555 XRCC2O43543 280 aa22.53■■□□□ 1.2
SCAMP4-210ENST00000588555 MTRF1O75570 445 aaKnown RBP22.53■■□□□ 1.2
SCAMP4-210ENST00000588555 AGFG2O95081 481 aa22.53■■□□□ 1.2
SCAMP4-210ENST00000588555 IL32P24001 234 aa22.53■■□□□ 1.2
SCAMP4-210ENST00000588555 CFPP27918 469 aa22.53■■□□□ 1.2
SCAMP4-210ENST00000588555 TNFSF8P32971 234 aa22.53■■□□□ 1.2
SCAMP4-210ENST00000588555 GNALP38405 381 aa22.53■■□□□ 1.2
SCAMP4-210ENST00000588555 PSMD7P51665 324 aa22.53■■□□□ 1.2
SCAMP4-210ENST00000588555 DYNC1I2Q13409 638 aaKnown RBP22.53■■□□□ 1.2
SCAMP4-210ENST00000588555 TNK1Q13470 666 aa22.53■■□□□ 1.2
SCAMP4-210ENST00000588555 CCDC190Q86UF4 302 aa22.53■■□□□ 1.2
SCAMP4-210ENST00000588555 OR5D14Q8NGL3 314 aa22.53■■□□□ 1.2
SCAMP4-210ENST00000588555 ZFAND2BQ8WV99 257 aa22.53■■□□□ 1.2
SCAMP4-210ENST00000588555 S100ZQ8WXG8 99 aa22.53■■□□□ 1.2
SCAMP4-210ENST00000588555 AMDHD2Q9Y303 409 aa22.53■■□□□ 1.2
SCAMP4-210ENST00000588555 SLC25A15Q9Y619 301 aa22.53■■□□□ 1.2
SCAMP4-210ENST00000588555 PCNX1Q96RV3 2341 aa22.52■■□□□ 1.2
SCAMP4-210ENST00000588555 CFAP46Q8IYW2 2715 aa22.52■■□□□ 1.2
SCAMP4-210ENST00000588555 hCG_38984A0A1B0GV85 526 aa22.52■■□□□ 1.2
SCAMP4-210ENST00000588555 CLDN25C9JDP6 229 aa22.52■■□□□ 1.2
SCAMP4-210ENST00000588555 ACKR3P25106 362 aa22.52■■□□□ 1.2
SCAMP4-210ENST00000588555 ETV6P41212 452 aa22.52■■□□□ 1.2
SCAMP4-210ENST00000588555 ZNF101Q8IZC7 436 aa22.52■■□□□ 1.2
SCAMP4-210ENST00000588555 PLEKHA1Q9HB21 404 aa22.52■■□□□ 1.2
SCAMP4-210ENST00000588555 HMG20AQ9NP66 347 aa22.52■■□□□ 1.2
SCAMP4-210ENST00000588555 OSGIN2Q9Y236 505 aa22.52■■□□□ 1.2
SCAMP4-210ENST00000588555 COL6A6A6NMZ7 2263 aa22.52■■□□□ 1.19
SCAMP4-210ENST00000588555 A0A0B4J203 849 aa22.51■■□□□ 1.19
SCAMP4-210ENST00000588555 TMEM127O75204 238 aa22.51■■□□□ 1.19
SCAMP4-210ENST00000588555 PAHP00439 452 aa22.51■■□□□ 1.19
SCAMP4-210ENST00000588555 NGFP01138 241 aa22.51■■□□□ 1.19
SCAMP4-210ENST00000588555 FAM3AP98173 230 aa22.51■■□□□ 1.19
SCAMP4-210ENST00000588555 SPOCK1Q08629 439 aa22.51■■□□□ 1.19
SCAMP4-210ENST00000588555 TBC1D28Q2M2D7 210 aa22.51■■□□□ 1.19
SCAMP4-210ENST00000588555 TIMM23BQ5SRD1 257 aa22.51■■□□□ 1.19
SCAMP4-210ENST00000588555 HES5Q5TA89 166 aa22.51■■□□□ 1.19
SCAMP4-210ENST00000588555 MZT2AQ6P582 158 aa22.51■■□□□ 1.19
SCAMP4-210ENST00000588555 LYPD6Q86Y78 171 aa22.51■■□□□ 1.19
SCAMP4-210ENST00000588555 OR1M1Q8NGA1 313 aa22.51■■□□□ 1.19
SCAMP4-210ENST00000588555 S100PBPQ96BU1 408 aa22.51■■□□□ 1.19
SCAMP4-210ENST00000588555 C10orf35Q96D05 121 aa22.51■■□□□ 1.19
SCAMP4-210ENST00000588555 PRR14LQ5THK1 2151 aa22.51■■□□□ 1.19
SCAMP4-210ENST00000588555 ICMTO60725 284 aa22.5■■□□□ 1.19
SCAMP4-210ENST00000588555 IGLV1-44P01699 117 aa22.5■■□□□ 1.19
SCAMP4-210ENST00000588555 FAHP16930 419 aa22.5■■□□□ 1.19
SCAMP4-210ENST00000588555 PPP3R1P63098 170 aa22.5■■□□□ 1.19
SCAMP4-210ENST00000588555 FAM27E3Q08E93 113 aa22.5■■□□□ 1.19
SCAMP4-210ENST00000588555 FAM169BQ8N8A8 192 aa22.5■■□□□ 1.19
SCAMP4-210ENST00000588555 OR13C9Q8NGT0 318 aa22.5■■□□□ 1.19
SCAMP4-210ENST00000588555 AKAP1Q92667 903 aaKnown RBP eCLIP22.5■■□□□ 1.19
SCAMP4-210ENST00000588555 CNTNAP3BQ96NU0 1288 aa22.5■■□□□ 1.19
SCAMP4-210ENST00000588555 CNTNAP3Q9BZ76 1288 aa22.5■■□□□ 1.19
SCAMP4-210ENST00000588555 ABRACLQ9P1F3 81 aa22.5■■□□□ 1.19
SCAMP4-210ENST00000588555 PIGLQ9Y2B2 252 aa22.5■■□□□ 1.19
SCAMP4-210ENST00000588555 STARD10Q9Y365 291 aa22.5■■□□□ 1.19
SCAMP4-210ENST00000588555 MEGF11A6BM72 1044 aa22.5■■□□□ 1.19
SCAMP4-210ENST00000588555 HPGDSO60760 199 aa22.5■■□□□ 1.19
SCAMP4-210ENST00000588555 THBS4P35443 961 aa22.5■■□□□ 1.19
SCAMP4-210ENST00000588555 OR8B8Q15620 311 aa22.5■■□□□ 1.19
SCAMP4-210ENST00000588555 PGAP1Q75T13 922 aa22.5■■□□□ 1.19
SCAMP4-210ENST00000588555 SEMA6DQ8NFY4 1073 aa22.5■■□□□ 1.19
SCAMP4-210ENST00000588555 C1QTNF6Q9BXI9 259 aa22.5■■□□□ 1.19
SCAMP4-210ENST00000588555 TBCCD1Q9NVR7 557 aa22.5■■□□□ 1.19
SCAMP4-210ENST00000588555 RELNP78509 3460 aa22.49■■□□□ 1.19
SCAMP4-210ENST00000588555 SNRPBP14678 240 aaKnown RBP22.49■■□□□ 1.19
SCAMP4-210ENST00000588555 RAB3AP20336 220 aa22.49■■□□□ 1.19
SCAMP4-210ENST00000588555 CCKARP32238 428 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms