RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-234	ENST00000584525	RAC2	P15153	192 aa		11.1	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	CRYBB2	P43320	205 aa		11.1	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	CX3CR1	P49238	355 aa		11.1	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	UBA52	P62987	128 aa	Known RBP	11.1	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	TIGD6	Q17RP2	521 aa		11.1	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	GFOD2	Q3B7J2	385 aa		11.1	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	ZIK1	Q3SY52	487 aa	Predicted RBP	11.1	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	FAM209A	Q5JX71	171 aa		11.1	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	LINC01590	Q5TEZ4	76 aa		11.1	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	NXNL2	Q5VZ03	156 aa		11.1	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	SHISA2	Q6UWI4	295 aa		11.1	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	USP51	Q70EK9	711 aa		11.1	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	SLC16A9	Q7RTY1	509 aa		11.1	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	ZNF555	Q8NEP9	628 aa		11.1	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	BBS1	Q8NFJ9	593 aa		11.1	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	ELMOD3	Q96FG2	381 aa		11.1	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	TIMD4	Q96H15	378 aa		11.1	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	ABHD6	Q9BV23	337 aa		11.1	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	ZNF747	Q9BV97	191 aa		11.1	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	OPA3	Q9H6K4	179 aa		11.1	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	DNAJC27	Q9NZQ0	273 aa		11.1	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	PURG	Q9UJV8	347 aa	Known RBP	11.1	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	IKZF2	Q9UKS7	526 aa		11.1	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	ZDHHC8	Q9ULC8	765 aa		11.1	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	NOP16	Q9Y3C1	178 aa	Known RBP	11.1	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	PPIAL4A	Q9Y536	164 aa		11.1	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	GMPPB	Q9Y5P6	360 aa		11.1	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	GGT3P	A6NGU5	568 aa		11.09	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	ZNF670-ZNF695	F2Z2N8	137 aa		11.09	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525		H0YHG0	523 aa		11.09	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525		M0R129	80 aa		11.09	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	PHYH	O14832	338 aa		11.09	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	XRCC2	O43543	280 aa		11.09	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	IGHV2-5	P01817	119 aa		11.09	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	ALPL	P05186	524 aa		11.09	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	TNFAIP6	P98066	277 aa	Predicted RBP	11.09	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	POU4F2	Q12837	409 aa		11.09	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	FOXL1	Q12952	345 aa		11.09	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	PSG7	Q13046	419 aa		11.09	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	HFE	Q30201	348 aa		11.09	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	C12orf73	Q69YU5	71 aa		11.09	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	OR2T2	Q6IF00	324 aa		11.09	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	RBMS3	Q6XE24	437 aa	Known RBP	11.09	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	MEPCE	Q7L2J0	689 aa	Known RBP	11.09	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	TIGD4	Q8IY51	512 aa		11.09	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	BHLHE23	Q8NDY6	225 aa		11.09	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	OR2Z1	Q8NG97	314 aa		11.09	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	OR8J1	Q8NGP2	316 aa		11.09	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	OTOS	Q8NHW6	89 aa		11.09	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	RAB1C	Q92928	201 aa		11.09	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	PGAM5	Q96HS1	289 aa		11.09	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	C1QTNF5	Q9BXJ0	243 aa		11.09	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	MRO	Q9BYG7	248 aa		11.09	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	YIPF3	Q9GZM5	350 aa		11.09	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	VCX	Q9H320	206 aa		11.09	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	POFUT1	Q9H488	388 aa		11.09	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	ZNF696	Q9H7X3	374 aa		11.09	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	BRD7	Q9NPI1	651 aa		11.09	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	NKIRAS2	Q9NYR9	191 aa		11.09	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	WIPI2	Q9Y4P8	454 aa		11.09	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	CACNG2	Q9Y698	323 aa		11.09	□□□□□ -0.63
CDK5RAP3-234	ENST00000584525	ANKRD65	E5RJM6	399 aa		11.08	□□□□□ -0.64
CDK5RAP3-234	ENST00000584525	TNFRSF1A	P19438	455 aa		11.08	□□□□□ -0.64
CDK5RAP3-234	ENST00000584525	KITLG	P21583	273 aa		11.08	□□□□□ -0.64
CDK5RAP3-234	ENST00000584525	GATA3	P23771	443 aa		11.08	□□□□□ -0.64
CDK5RAP3-234	ENST00000584525	LCN2	P80188	198 aa		11.08	□□□□□ -0.64
CDK5RAP3-234	ENST00000584525	SLC3A1	Q07837	685 aa		11.08	□□□□□ -0.64
CDK5RAP3-234	ENST00000584525	HLX	Q14774	488 aa	Predicted RBP	11.08	□□□□□ -0.64
CDK5RAP3-234	ENST00000584525	RCN1	Q15293	331 aa		11.08	□□□□□ -0.64
CDK5RAP3-234	ENST00000584525	PCK2	Q16822	640 aa		11.08	□□□□□ -0.64
CDK5RAP3-234	ENST00000584525	FBXW12	Q6X9E4	464 aa		11.08	□□□□□ -0.64
CDK5RAP3-234	ENST00000584525	COMMD2	Q86X83	199 aa		11.08	□□□□□ -0.64
CDK5RAP3-234	ENST00000584525	ST7L	Q8TDW4	575 aa		11.08	□□□□□ -0.64
CDK5RAP3-234	ENST00000584525	RNF133	Q8WVZ7	376 aa		11.08	□□□□□ -0.64
CDK5RAP3-234	ENST00000584525	ASB17	Q8WXJ9	295 aa		11.08	□□□□□ -0.64
CDK5RAP3-234	ENST00000584525	CCL17	Q92583	94 aa		11.08	□□□□□ -0.64
CDK5RAP3-234	ENST00000584525	GTF3A	Q92664	365 aa	Known RBP	11.08	□□□□□ -0.64
CDK5RAP3-234	ENST00000584525	HAVCR1	Q96D42	359 aa		11.08	□□□□□ -0.64
CDK5RAP3-234	ENST00000584525	MNT	Q99583	582 aa		11.08	□□□□□ -0.64
CDK5RAP3-234	ENST00000584525	TEAD3	Q99594	435 aa		11.08	□□□□□ -0.64
CDK5RAP3-234	ENST00000584525	GAL3ST1	Q99999	423 aa		11.08	□□□□□ -0.64
CDK5RAP3-234	ENST00000584525	OR10A2	Q9H208	303 aa		11.08	□□□□□ -0.64
CDK5RAP3-234	ENST00000584525	NIPAL2	Q9H841	368 aa		11.08	□□□□□ -0.64
CDK5RAP3-234	ENST00000584525	MARCH7	Q9H992	704 aa		11.08	□□□□□ -0.64
CDK5RAP3-234	ENST00000584525	MSL2	Q9HCI7	577 aa		11.08	□□□□□ -0.64
CDK5RAP3-234	ENST00000584525	PNRC2	Q9NPJ4	139 aa	Known RBP	11.08	□□□□□ -0.64
CDK5RAP3-234	ENST00000584525	WARS2	Q9UGM6	360 aa	Known RBP	11.08	□□□□□ -0.64
CDK5RAP3-234	ENST00000584525	OPN4	Q9UHM6	478 aa		11.08	□□□□□ -0.64
CDK5RAP3-234	ENST00000584525	GTF2A1L	Q9UNN4	478 aa		11.08	□□□□□ -0.64
CDK5RAP3-234	ENST00000584525	ISPD	A4D126	451 aa		11.07	□□□□□ -0.64
CDK5RAP3-234	ENST00000584525	ZSCAN5B	A6NJL1	495 aa		11.07	□□□□□ -0.64
CDK5RAP3-234	ENST00000584525	IGHV1-46	P01743	117 aa		11.07	□□□□□ -0.64
CDK5RAP3-234	ENST00000584525	HKR1	P10072	659 aa		11.07	□□□□□ -0.64
CDK5RAP3-234	ENST00000584525	SLC2A1	P11166	492 aa		11.07	□□□□□ -0.64
CDK5RAP3-234	ENST00000584525	CFL1	P23528	166 aa	Known RBP	11.07	□□□□□ -0.64
CDK5RAP3-234	ENST00000584525	EPHA2	P29317	976 aa		11.07	□□□□□ -0.64
CDK5RAP3-234	ENST00000584525	RIDA	P52758	137 aa	Known RBP	11.07	□□□□□ -0.64
CDK5RAP3-234	ENST00000584525	SNCB	Q16143	134 aa		11.07	□□□□□ -0.64
CDK5RAP3-234	ENST00000584525	LRRN1	Q6UXK5	716 aa		11.07	□□□□□ -0.64
CDK5RAP3-234	ENST00000584525	FAM57B	Q71RH2	274 aa		11.07	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 96 ms