RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 PIN1P1O15428 100 aa11.97□□□□□ -0.49
TSEN54-206ENST00000579449 LMX1BO60663 402 aa11.97□□□□□ -0.49
TSEN54-206ENST00000579449 ICMTO60725 284 aa11.97□□□□□ -0.49
TSEN54-206ENST00000579449 SMPD2O60906 423 aa11.97□□□□□ -0.49
TSEN54-206ENST00000579449 ATE1O95260 518 aa11.97□□□□□ -0.49
TSEN54-206ENST00000579449 FAM157BP0CG42 384 aa11.97□□□□□ -0.49
TSEN54-206ENST00000579449 PCSK6P29122 969 aa11.97□□□□□ -0.49
TSEN54-206ENST00000579449 ZNF92Q03936 586 aa11.97□□□□□ -0.49
TSEN54-206ENST00000579449 SPCS2Q15005 226 aa11.97□□□□□ -0.49
TSEN54-206ENST00000579449 PAMR1Q6UXH9 720 aa11.97□□□□□ -0.49
TSEN54-206ENST00000579449 PLPP7Q8NBV4 271 aa11.97□□□□□ -0.49
TSEN54-206ENST00000579449 OR5L1Q8NGL2 311 aa11.97□□□□□ -0.49
TSEN54-206ENST00000579449 AKAP1Q92667 903 aaKnown RBP eCLIP11.97□□□□□ -0.49
TSEN54-206ENST00000579449 SPSB4Q96A44 273 aa11.97□□□□□ -0.49
TSEN54-206ENST00000579449 DERL3Q96Q80 235 aa11.97□□□□□ -0.49
TSEN54-206ENST00000579449 PPIL3Q9H2H8 161 aaKnown RBP11.97□□□□□ -0.49
TSEN54-206ENST00000579449 NOX4Q9NPH5 578 aa11.97□□□□□ -0.49
TSEN54-206ENST00000579449 NPDC1Q9NQX5 325 aaPredicted RBP11.97□□□□□ -0.49
TSEN54-206ENST00000579449 ZNF391Q9UJN7 358 aa11.97□□□□□ -0.49
TSEN54-206ENST00000579449 J3QW42 95 aa11.96□□□□□ -0.49
TSEN54-206ENST00000579449 SLC22A1O15245 554 aa11.96□□□□□ -0.49
TSEN54-206ENST00000579449 UCHL1P09936 223 aa11.96□□□□□ -0.49
TSEN54-206ENST00000579449 CD40P25942 277 aa11.96□□□□□ -0.49
TSEN54-206ENST00000579449 MAPK3P27361 379 aaPredicted RBP11.96□□□□□ -0.49
TSEN54-206ENST00000579449 UCP2P55851 309 aa11.96□□□□□ -0.49
TSEN54-206ENST00000579449 PPP1CBP62140 327 aa11.96□□□□□ -0.49
TSEN54-206ENST00000579449 MALLQ13021 153 aa11.96□□□□□ -0.49
TSEN54-206ENST00000579449 Q6ZSR3 168 aa11.96□□□□□ -0.49
TSEN54-206ENST00000579449 CCDC54Q8NEL0 328 aa11.96□□□□□ -0.49
TSEN54-206ENST00000579449 OR14K1Q8NGZ2 314 aa11.96□□□□□ -0.49
TSEN54-206ENST00000579449 NDNFQ8TB73 568 aa11.96□□□□□ -0.49
TSEN54-206ENST00000579449 PHYHIPQ92561 330 aa11.96□□□□□ -0.49
TSEN54-206ENST00000579449 TMEM106AQ96A25 262 aa11.96□□□□□ -0.49
TSEN54-206ENST00000579449 FGGYQ96C11 551 aa11.96□□□□□ -0.49
TSEN54-206ENST00000579449 ORAI1Q96D31 301 aa11.96□□□□□ -0.49
TSEN54-206ENST00000579449 KCTD7Q96MP8 289 aa11.96□□□□□ -0.49
TSEN54-206ENST00000579449 RGCCQ9H4X1 137 aa11.96□□□□□ -0.49
TSEN54-206ENST00000579449 ZNF275Q9NSD4 429 aaPredicted RBP11.96□□□□□ -0.49
TSEN54-206ENST00000579449 V9GYS6 101 aa11.96□□□□□ -0.49
TSEN54-206ENST00000579449 CHD6Q8TD26 2715 aa11.95□□□□□ -0.5
TSEN54-206ENST00000579449 hCG_38984A0A1B0GV85 526 aa11.95□□□□□ -0.5
TSEN54-206ENST00000579449 LOC390937A0A1W2PQ73 354 aa11.95□□□□□ -0.5
TSEN54-206ENST00000579449 DPRXA6NFQ7 191 aa11.95□□□□□ -0.5
TSEN54-206ENST00000579449 TUBAL3A6NHL2 446 aa11.95□□□□□ -0.5
TSEN54-206ENST00000579449 MTRF1O75570 445 aaKnown RBP11.95□□□□□ -0.5
TSEN54-206ENST00000579449 DHRS3O75911 302 aa11.95□□□□□ -0.5
TSEN54-206ENST00000579449 CRYAAP02489 173 aa11.95□□□□□ -0.5
TSEN54-206ENST00000579449 CD2P06729 351 aa11.95□□□□□ -0.5
TSEN54-206ENST00000579449 EPXP11678 715 aa11.95□□□□□ -0.5
TSEN54-206ENST00000579449 ZNF12P17014 697 aa11.95□□□□□ -0.5
TSEN54-206ENST00000579449 CFL1P23528 166 aaKnown RBP11.95□□□□□ -0.5
TSEN54-206ENST00000579449 PTAFRP25105 342 aa11.95□□□□□ -0.5
TSEN54-206ENST00000579449 CALRP27797 417 aaKnown RBP11.95□□□□□ -0.5
TSEN54-206ENST00000579449 RAD52P43351 418 aa11.95□□□□□ -0.5
TSEN54-206ENST00000579449 SERPINB10P48595 397 aa11.95□□□□□ -0.5
TSEN54-206ENST00000579449 GSK3AP49840 483 aa11.95□□□□□ -0.5
TSEN54-206ENST00000579449 PRSS12P56730 875 aa11.95□□□□□ -0.5
TSEN54-206ENST00000579449 ERVS71-1P61550 626 aa11.95□□□□□ -0.5
TSEN54-206ENST00000579449 FAM3AP98173 230 aa11.95□□□□□ -0.5
TSEN54-206ENST00000579449 SPOCK1Q08629 439 aa11.95□□□□□ -0.5
TSEN54-206ENST00000579449 TNK1Q13470 666 aa11.95□□□□□ -0.5
TSEN54-206ENST00000579449 GK2Q14410 553 aaPredicted RBP11.95□□□□□ -0.5
TSEN54-206ENST00000579449 HLXQ14774 488 aaPredicted RBP11.95□□□□□ -0.5
TSEN54-206ENST00000579449 HSD17B12Q53GQ0 312 aa11.95□□□□□ -0.5
TSEN54-206ENST00000579449 SPATA46Q5T0L3 261 aa11.95□□□□□ -0.5
TSEN54-206ENST00000579449 TMEM108Q6UXF1 575 aa11.95□□□□□ -0.5
TSEN54-206ENST00000579449 MRPL21Q7Z2W9 205 aaKnown RBP11.95□□□□□ -0.5
TSEN54-206ENST00000579449 OR1J1Q8NGS3 322 aa11.95□□□□□ -0.5
TSEN54-206ENST00000579449 THRSPQ92748 146 aa11.95□□□□□ -0.5
TSEN54-206ENST00000579449 REPIN1Q9BWE0 567 aaKnown RBP11.95□□□□□ -0.5
TSEN54-206ENST00000579449 NGBQ9NPG2 151 aa11.95□□□□□ -0.5
TSEN54-206ENST00000579449 SHISA3A0PJX4 238 aa11.94□□□□□ -0.5
TSEN54-206ENST00000579449 ANKRD61A6NGH8 418 aa11.94□□□□□ -0.5
TSEN54-206ENST00000579449 A6NIN4 97 aa11.94□□□□□ -0.5
TSEN54-206ENST00000579449 ARL6IP5O75915 188 aa11.94□□□□□ -0.5
TSEN54-206ENST00000579449 CDRT1O95170 752 aa11.94□□□□□ -0.5
TSEN54-206ENST00000579449 RAF1P04049 648 aa11.94□□□□□ -0.5
TSEN54-206ENST00000579449 ZNF20P17024 532 aa11.94□□□□□ -0.5
TSEN54-206ENST00000579449 MYL9P24844 172 aa11.94□□□□□ -0.5
TSEN54-206ENST00000579449 ACKR3P25106 362 aa11.94□□□□□ -0.5
TSEN54-206ENST00000579449 SDC2P34741 201 aa11.94□□□□□ -0.5
TSEN54-206ENST00000579449 MAP2K3P46734 347 aa11.94□□□□□ -0.5
TSEN54-206ENST00000579449 UNQ6126/PRO20091Q6UXV3 157 aa11.94□□□□□ -0.5
TSEN54-206ENST00000579449 USP43Q70EL4 1123 aa11.94□□□□□ -0.5
TSEN54-206ENST00000579449 PGAP1Q75T13 922 aa11.94□□□□□ -0.5
TSEN54-206ENST00000579449 KBTBD8Q8NFY9 601 aa11.94□□□□□ -0.5
TSEN54-206ENST00000579449 SLC25A40Q8TBP6 338 aa11.94□□□□□ -0.5
TSEN54-206ENST00000579449 ADAT3Q96EY9 351 aaPredicted RBP11.94□□□□□ -0.5
TSEN54-206ENST00000579449 RADILQ96JH8 1075 aa11.94□□□□□ -0.5
TSEN54-206ENST00000579449 BCL2L14Q9BZR8 327 aa11.94□□□□□ -0.5
TSEN54-206ENST00000579449 OR2J1Q9GZK6 312 aa11.94□□□□□ -0.5
TSEN54-206ENST00000579449 DCSTAMPQ9H295 470 aa11.94□□□□□ -0.5
TSEN54-206ENST00000579449 OPA3Q9H6K4 179 aa11.94□□□□□ -0.5
TSEN54-206ENST00000579449 PIGLQ9Y2B2 252 aa11.94□□□□□ -0.5
TSEN54-206ENST00000579449 SPEF1Q9Y4P9 236 aa11.94□□□□□ -0.5
TSEN54-206ENST00000579449 TRAV8-7A0A075B6U6 113 aa11.93□□□□□ -0.5
TSEN54-206ENST00000579449 TRAV1-2A0A0B4J238 106 aa11.93□□□□□ -0.5
TSEN54-206ENST00000579449 A0A1W2PPW3 197 aa11.93□□□□□ -0.5
TSEN54-206ENST00000579449 WIPF3A6NGB9 483 aa11.93□□□□□ -0.5
TSEN54-206ENST00000579449 TRIM64BA6NI03 449 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms