RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 CGREF1Q99674 301 aa13.22□□□□□ -0.29
CTDNEP1-211ENST00000575783 KAT8Q9H7Z6 458 aaKnown RBP13.22□□□□□ -0.29
CTDNEP1-211ENST00000575783 ADA2Q9NZK5 511 aa13.22□□□□□ -0.29
CTDNEP1-211ENST00000575783 SF3B6Q9Y3B4 125 aaKnown RBP13.22□□□□□ -0.29
CTDNEP1-211ENST00000575783 PCDHGB5Q9Y5G0 923 aa13.22□□□□□ -0.29
CTDNEP1-211ENST00000575783 TENM2Q9NT68 2774 aa13.22□□□□□ -0.29
CTDNEP1-211ENST00000575783 HTR3EA5X5Y0 456 aa13.21□□□□□ -0.29
CTDNEP1-211ENST00000575783 MEGF11A6BM72 1044 aa13.21□□□□□ -0.29
CTDNEP1-211ENST00000575783 GGT3PA6NGU5 568 aa13.21□□□□□ -0.29
CTDNEP1-211ENST00000575783 E9PQ18 207 aa13.21□□□□□ -0.29
CTDNEP1-211ENST00000575783 ACOT8O14734 319 aa13.21□□□□□ -0.29
CTDNEP1-211ENST00000575783 PF4V1P10720 104 aa13.21□□□□□ -0.29
CTDNEP1-211ENST00000575783 MUC1P15941 1255 aaPredicted RBP13.21□□□□□ -0.29
CTDNEP1-211ENST00000575783 FAHP16930 419 aa13.21□□□□□ -0.29
CTDNEP1-211ENST00000575783 GGT2P36268 569 aa13.21□□□□□ -0.29
CTDNEP1-211ENST00000575783 SLC35A2P78381 396 aa13.21□□□□□ -0.29
CTDNEP1-211ENST00000575783 ST3GAL3Q11203 375 aa13.21□□□□□ -0.29
CTDNEP1-211ENST00000575783 KCNMB1Q16558 191 aa13.21□□□□□ -0.29
CTDNEP1-211ENST00000575783 PCK2Q16822 640 aa13.21□□□□□ -0.29
CTDNEP1-211ENST00000575783 VMACQ2NL98 169 aa13.21□□□□□ -0.29
CTDNEP1-211ENST00000575783 ANKDD1AQ495B1 522 aa13.21□□□□□ -0.29
CTDNEP1-211ENST00000575783 LRRC10Q5BKY1 277 aa13.21□□□□□ -0.29
CTDNEP1-211ENST00000575783 CCDC80Q76M96 950 aa13.21□□□□□ -0.29
CTDNEP1-211ENST00000575783 LNX2Q8N448 690 aa13.21□□□□□ -0.29
CTDNEP1-211ENST00000575783 LRRC29Q8WV35 223 aa13.21□□□□□ -0.29
CTDNEP1-211ENST00000575783 SEH1LQ96EE3 360 aa13.21□□□□□ -0.29
CTDNEP1-211ENST00000575783 DDOQ99489 341 aa13.21□□□□□ -0.29
CTDNEP1-211ENST00000575783 PITX2Q99697 317 aa13.21□□□□□ -0.29
CTDNEP1-211ENST00000575783 NUAK2Q9H093 628 aa13.21□□□□□ -0.29
CTDNEP1-211ENST00000575783 MEGF9Q9H1U4 602 aa13.21□□□□□ -0.29
CTDNEP1-211ENST00000575783 METTL8Q9H825 291 aaKnown RBP13.21□□□□□ -0.29
CTDNEP1-211ENST00000575783 NDUFAF1Q9Y375 327 aa13.21□□□□□ -0.29
CTDNEP1-211ENST00000575783 SELLP14151 372 aa13.2□□□□□ -0.3
CTDNEP1-211ENST00000575783 POU1F1P28069 291 aa13.2□□□□□ -0.3
CTDNEP1-211ENST00000575783 PRKCDQ05655 676 aa13.2□□□□□ -0.3
CTDNEP1-211ENST00000575783 KRR1Q13601 381 aaKnown RBP13.2□□□□□ -0.3
CTDNEP1-211ENST00000575783 FAM122BQ7Z309 247 aa13.2□□□□□ -0.3
CTDNEP1-211ENST00000575783 LINC00346Q8IVM7 164 aa13.2□□□□□ -0.3
CTDNEP1-211ENST00000575783 OR5T2Q8NGG2 359 aa13.2□□□□□ -0.3
CTDNEP1-211ENST00000575783 AJUBAQ96IF1 538 aa13.2□□□□□ -0.3
CTDNEP1-211ENST00000575783 NMNAT1Q9HAN9 279 aaPredicted RBP13.2□□□□□ -0.3
CTDNEP1-211ENST00000575783 C14orf119Q9NWQ9 140 aa13.2□□□□□ -0.3
CTDNEP1-211ENST00000575783 RHCGQ9UBD6 479 aa13.2□□□□□ -0.3
CTDNEP1-211ENST00000575783 U3KQK5 164 aa13.2□□□□□ -0.3
CTDNEP1-211ENST00000575783 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.19□□□□□ -0.3
CTDNEP1-211ENST00000575783 A0A1W2PQ09 198 aa13.19□□□□□ -0.3
CTDNEP1-211ENST00000575783 TMEM120BA0PK00 339 aa13.19□□□□□ -0.3
CTDNEP1-211ENST00000575783 C3orf84H3BNL1 204 aa13.19□□□□□ -0.3
CTDNEP1-211ENST00000575783 ANGPTL7O43827 346 aa13.19□□□□□ -0.3
CTDNEP1-211ENST00000575783 PF4P02776 101 aa13.19□□□□□ -0.3
CTDNEP1-211ENST00000575783 YAP1P46937 504 aaKnown RBP13.19□□□□□ -0.3
CTDNEP1-211ENST00000575783 IDH3AP50213 366 aa13.19□□□□□ -0.3
CTDNEP1-211ENST00000575783 SLC18A1P54219 525 aa13.19□□□□□ -0.3
CTDNEP1-211ENST00000575783 GMFBP60983 142 aa13.19□□□□□ -0.3
CTDNEP1-211ENST00000575783 ZNF92Q03936 586 aa13.19□□□□□ -0.3
CTDNEP1-211ENST00000575783 TRAP1Q12931 704 aaKnown RBP13.19□□□□□ -0.3
CTDNEP1-211ENST00000575783 BLMHQ13867 455 aa13.19□□□□□ -0.3
CTDNEP1-211ENST00000575783 KRTAP27-1Q3LI81 207 aa13.19□□□□□ -0.3
CTDNEP1-211ENST00000575783 ARSJQ5FYB0 599 aaPredicted RBP13.19□□□□□ -0.3
CTDNEP1-211ENST00000575783 CFAP77Q6ZQR2 320 aa13.19□□□□□ -0.3
CTDNEP1-211ENST00000575783 LIAT1Q6ZQX7 453 aa13.19□□□□□ -0.3
CTDNEP1-211ENST00000575783 OR9Q1Q8NGQ5 310 aa13.19□□□□□ -0.3
CTDNEP1-211ENST00000575783 OR2AE1Q8NHA4 323 aa13.19□□□□□ -0.3
CTDNEP1-211ENST00000575783 C8orf46Q8TAG6 207 aa13.19□□□□□ -0.3
CTDNEP1-211ENST00000575783 RCC1LQ96I51 464 aaKnown RBP13.19□□□□□ -0.3
CTDNEP1-211ENST00000575783 TSSK2Q96PF2 358 aa13.19□□□□□ -0.3
CTDNEP1-211ENST00000575783 ATF6BQ99941 703 aa13.19□□□□□ -0.3
CTDNEP1-211ENST00000575783 EBF4Q9BQW3 602 aa13.19□□□□□ -0.3
CTDNEP1-211ENST00000575783 MRPL15Q9P015 296 aaKnown RBP13.19□□□□□ -0.3
CTDNEP1-211ENST00000575783 A4GNTQ9UNA3 340 aa13.19□□□□□ -0.3
CTDNEP1-211ENST00000575783 H0YAE9 185 aa13.18□□□□□ -0.3
CTDNEP1-211ENST00000575783 M0R1W7 72 aa13.18□□□□□ -0.3
CTDNEP1-211ENST00000575783 BHLHE40O14503 412 aa13.18□□□□□ -0.3
CTDNEP1-211ENST00000575783 SOCS2O14508 198 aa13.18□□□□□ -0.3
CTDNEP1-211ENST00000575783 CDC42EP2O14613 210 aa13.18□□□□□ -0.3
CTDNEP1-211ENST00000575783 IFNA8P32881 189 aa13.18□□□□□ -0.3
CTDNEP1-211ENST00000575783 GRK5P34947 590 aa13.18□□□□□ -0.3
CTDNEP1-211ENST00000575783 MDH1P40925 334 aaKnown RBP13.18□□□□□ -0.3
CTDNEP1-211ENST00000575783 GPR4P46093 362 aa13.18□□□□□ -0.3
CTDNEP1-211ENST00000575783 TGM4P49221 684 aa13.18□□□□□ -0.3
CTDNEP1-211ENST00000575783 GSK3BP49841 420 aa13.18□□□□□ -0.3
CTDNEP1-211ENST00000575783 TPTEP56180 551 aa13.18□□□□□ -0.3
CTDNEP1-211ENST00000575783 MZT1Q08AG7 82 aa13.18□□□□□ -0.3
CTDNEP1-211ENST00000575783 AANATQ16613 207 aa13.18□□□□□ -0.3
CTDNEP1-211ENST00000575783 ZBED5Q49AG3 693 aa13.18□□□□□ -0.3
CTDNEP1-211ENST00000575783 TNFAIP8L3Q5GJ75 292 aa13.18□□□□□ -0.3
CTDNEP1-211ENST00000575783 HCP5Q6MZN7 132 aa13.18□□□□□ -0.3
CTDNEP1-211ENST00000575783 TSEN54Q7Z6J9 526 aaKnown RBP13.18□□□□□ -0.3
CTDNEP1-211ENST00000575783 C11orf53Q8IXP5 236 aa13.18□□□□□ -0.3
CTDNEP1-211ENST00000575783 Q8N2B8 174 aa13.18□□□□□ -0.3
CTDNEP1-211ENST00000575783 PIFOQ8TCI5 191 aa13.18□□□□□ -0.3
CTDNEP1-211ENST00000575783 WIPF2Q8TF74 440 aaPredicted RBP13.18□□□□□ -0.3
CTDNEP1-211ENST00000575783 DUS3LQ96G46 650 aaKnown RBP13.18□□□□□ -0.3
CTDNEP1-211ENST00000575783 VSX1Q9NZR4 365 aaPredicted RBP13.18□□□□□ -0.3
CTDNEP1-211ENST00000575783 TRBV23-1A0A0A0MS06 115 aa13.17□□□□□ -0.3
CTDNEP1-211ENST00000575783 ANGPT2O15123 496 aa13.17□□□□□ -0.3
CTDNEP1-211ENST00000575783 AMY2BP19961 511 aa13.17□□□□□ -0.3
CTDNEP1-211ENST00000575783 SDHAP31040 664 aa13.17□□□□□ -0.3
CTDNEP1-211ENST00000575783 GZMMP51124 257 aa13.17□□□□□ -0.3
CTDNEP1-211ENST00000575783 RAB13P51153 203 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms