RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 WARS2Q9UGM6 360 aaKnown RBP10.92□□□□□ -0.66
TSC2-220ENST00000568238 METRNQ9UJH8 293 aa10.92□□□□□ -0.66
TSC2-220ENST00000568238 ZDHHC8Q9ULC8 765 aa10.92□□□□□ -0.66
TSC2-220ENST00000568238 ISPDA4D126 451 aa10.91□□□□□ -0.66
TSC2-220ENST00000568238 H0YAE9 185 aa10.91□□□□□ -0.66
TSC2-220ENST00000568238 CD55P08174 381 aa10.91□□□□□ -0.66
TSC2-220ENST00000568238 TUBG1P23258 451 aa10.91□□□□□ -0.66
TSC2-220ENST00000568238 ATP6V1E1P36543 226 aa10.91□□□□□ -0.66
TSC2-220ENST00000568238 VHLP40337 213 aa10.91□□□□□ -0.66
TSC2-220ENST00000568238 PSG7Q13046 419 aa10.91□□□□□ -0.66
TSC2-220ENST00000568238 TAF13Q15543 124 aa10.91□□□□□ -0.66
TSC2-220ENST00000568238 SLC25A30Q5SVS4 291 aa10.91□□□□□ -0.66
TSC2-220ENST00000568238 MEDAGQ5VYS4 303 aa10.91□□□□□ -0.66
TSC2-220ENST00000568238 FAHD2BQ6P2I3 314 aaPredicted RBP10.91□□□□□ -0.66
TSC2-220ENST00000568238 SLC35F2Q8IXU6 374 aa10.91□□□□□ -0.66
TSC2-220ENST00000568238 C8orf59Q8N0T1 100 aaPredicted RBP10.91□□□□□ -0.66
TSC2-220ENST00000568238 TEX29Q8N6K0 151 aa10.91□□□□□ -0.66
TSC2-220ENST00000568238 ZNF454Q8N9F8 522 aa10.91□□□□□ -0.66
TSC2-220ENST00000568238 SETD9Q8NE22 299 aa10.91□□□□□ -0.66
TSC2-220ENST00000568238 OTOSQ8NHW6 89 aa10.91□□□□□ -0.66
TSC2-220ENST00000568238 CNIH3Q8TBE1 160 aa10.91□□□□□ -0.66
TSC2-220ENST00000568238 APH1BQ8WW43 257 aa10.91□□□□□ -0.66
TSC2-220ENST00000568238 TFAP2CQ92754 450 aa10.91□□□□□ -0.66
TSC2-220ENST00000568238 RNFT2Q96EX2 444 aa10.91□□□□□ -0.66
TSC2-220ENST00000568238 FAHD2AQ96GK7 314 aa10.91□□□□□ -0.66
TSC2-220ENST00000568238 TBX5Q99593 518 aa10.91□□□□□ -0.66
TSC2-220ENST00000568238 COQ7Q99807 217 aa10.91□□□□□ -0.66
TSC2-220ENST00000568238 GAL3ST1Q99999 423 aa10.91□□□□□ -0.66
TSC2-220ENST00000568238 ABHD6Q9BV23 337 aa10.91□□□□□ -0.66
TSC2-220ENST00000568238 POFUT1Q9H488 388 aa10.91□□□□□ -0.66
TSC2-220ENST00000568238 TUBG2Q9NRH3 451 aa10.91□□□□□ -0.66
TSC2-220ENST00000568238 ATPIF1Q9UII2 106 aa10.91□□□□□ -0.66
TSC2-220ENST00000568238 LAMP5Q9UJQ1 280 aa10.91□□□□□ -0.66
TSC2-220ENST00000568238 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.91□□□□□ -0.66
TSC2-220ENST00000568238 A0A0G2JMP0 313 aa10.9□□□□□ -0.66
TSC2-220ENST00000568238 A0A0X1KG70 313 aa10.9□□□□□ -0.66
TSC2-220ENST00000568238 ZNF878C9JN71 531 aa10.9□□□□□ -0.66
TSC2-220ENST00000568238 F5H5K5 113 aa10.9□□□□□ -0.66
TSC2-220ENST00000568238 H0YJX3 145 aa10.9□□□□□ -0.66
TSC2-220ENST00000568238 WBP4O75554 376 aaKnown RBP10.9□□□□□ -0.66
TSC2-220ENST00000568238 LYNP07948 512 aa10.9□□□□□ -0.66
TSC2-220ENST00000568238 SBK2P0C263 348 aa10.9□□□□□ -0.66
TSC2-220ENST00000568238 TNFSF4P23510 183 aa10.9□□□□□ -0.66
TSC2-220ENST00000568238 MTNR1AP48039 350 aa10.9□□□□□ -0.66
TSC2-220ENST00000568238 TNFAIP6P98066 277 aaPredicted RBP10.9□□□□□ -0.66
TSC2-220ENST00000568238 ZNF91Q05481 1191 aa10.9□□□□□ -0.66
TSC2-220ENST00000568238 ECH1Q13011 328 aa10.9□□□□□ -0.66
TSC2-220ENST00000568238 IL18R1Q13478 541 aa10.9□□□□□ -0.66
TSC2-220ENST00000568238 SMN1Q16637 294 aaKnown RBP10.9□□□□□ -0.66
TSC2-220ENST00000568238 PEG10Q86TG7 708 aaKnown RBP10.9□□□□□ -0.66
TSC2-220ENST00000568238 OR4M2Q8NGB6 313 aa10.9□□□□□ -0.66
TSC2-220ENST00000568238 RNF133Q8WVZ7 376 aa10.9□□□□□ -0.66
TSC2-220ENST00000568238 SPTSSAQ969W0 71 aa10.9□□□□□ -0.66
TSC2-220ENST00000568238 Q96MT0 163 aa10.9□□□□□ -0.66
TSC2-220ENST00000568238 COG8Q96MW5 612 aa10.9□□□□□ -0.66
TSC2-220ENST00000568238 YIPF3Q9GZM5 350 aa10.9□□□□□ -0.66
TSC2-220ENST00000568238 OCEL1Q9H607 264 aa10.9□□□□□ -0.66
TSC2-220ENST00000568238 AMBNQ9NP70 447 aa10.9□□□□□ -0.66
TSC2-220ENST00000568238 G6PC2Q9NQR9 355 aa10.9□□□□□ -0.66
TSC2-220ENST00000568238 DDX28Q9NUL7 540 aaKnown RBP10.9□□□□□ -0.66
TSC2-220ENST00000568238 HAO2Q9NYQ3 351 aa10.9□□□□□ -0.66
TSC2-220ENST00000568238 PURGQ9UJV8 347 aaKnown RBP10.9□□□□□ -0.66
TSC2-220ENST00000568238 COPS3Q9UNS2 423 aa10.9□□□□□ -0.66
TSC2-220ENST00000568238 ARHGAP32A7KAX9 2087 aa10.89□□□□□ -0.67
TSC2-220ENST00000568238 SNTNA6NMZ2 147 aa10.89□□□□□ -0.67
TSC2-220ENST00000568238 PLPP2O43688 288 aa10.89□□□□□ -0.67
TSC2-220ENST00000568238 DBTP11182 482 aaKnown RBP10.89□□□□□ -0.67
TSC2-220ENST00000568238 ALOX5APP20292 161 aa10.89□□□□□ -0.67
TSC2-220ENST00000568238 KITLGP21583 273 aa10.89□□□□□ -0.67
TSC2-220ENST00000568238 HSPA13P48723 471 aa10.89□□□□□ -0.67
TSC2-220ENST00000568238 PRKXP51817 358 aa10.89□□□□□ -0.67
TSC2-220ENST00000568238 POU4F2Q12837 409 aa10.89□□□□□ -0.67
TSC2-220ENST00000568238 CDK5R2Q13319 367 aa10.89□□□□□ -0.67
TSC2-220ENST00000568238 TMED1Q13445 227 aa10.89□□□□□ -0.67
TSC2-220ENST00000568238 RSPO1Q2MKA7 263 aaPredicted RBP10.89□□□□□ -0.67
TSC2-220ENST00000568238 LRRN1Q6UXK5 716 aa10.89□□□□□ -0.67
TSC2-220ENST00000568238 OR2Z1Q8NG97 314 aa10.89□□□□□ -0.67
TSC2-220ENST00000568238 OR10H4Q8NGA5 316 aa10.89□□□□□ -0.67
TSC2-220ENST00000568238 TMEM14AQ9Y6G1 99 aa10.89□□□□□ -0.67
TSC2-220ENST00000568238 LOC105371242A0A075B767 164 aa10.88□□□□□ -0.67
TSC2-220ENST00000568238 PRR32B1ATL7 298 aa10.88□□□□□ -0.67
TSC2-220ENST00000568238 ZNF670-ZNF695F2Z2N8 137 aa10.88□□□□□ -0.67
TSC2-220ENST00000568238 J3QW42 95 aa10.88□□□□□ -0.67
TSC2-220ENST00000568238 M0R135 149 aa10.88□□□□□ -0.67
TSC2-220ENST00000568238 PSMD9O00233 223 aa10.88□□□□□ -0.67
TSC2-220ENST00000568238 H2BFMP0C1H6 154 aa10.88□□□□□ -0.67
TSC2-220ENST00000568238 ACSM4P0C7M7 580 aa10.88□□□□□ -0.67
TSC2-220ENST00000568238 SLC2A1P11166 492 aa10.88□□□□□ -0.67
TSC2-220ENST00000568238 TNFRSF1AP19438 455 aa10.88□□□□□ -0.67
TSC2-220ENST00000568238 HSD11B1P28845 292 aa10.88□□□□□ -0.67
TSC2-220ENST00000568238 OPRL1P41146 370 aa10.88□□□□□ -0.67
TSC2-220ENST00000568238 SLC6A9P48067 706 aa10.88□□□□□ -0.67
TSC2-220ENST00000568238 CX3CR1P49238 355 aa10.88□□□□□ -0.67
TSC2-220ENST00000568238 RGS6P49758 472 aa10.88□□□□□ -0.67
TSC2-220ENST00000568238 CXCR4P61073 352 aa10.88□□□□□ -0.67
TSC2-220ENST00000568238 ISL1P61371 349 aa10.88□□□□□ -0.67
TSC2-220ENST00000568238 SNCBQ16143 134 aa10.88□□□□□ -0.67
TSC2-220ENST00000568238 KRTAP27-1Q3LI81 207 aa10.88□□□□□ -0.67
TSC2-220ENST00000568238 SPRNQ5BIV9 151 aa10.88□□□□□ -0.67
TSC2-220ENST00000568238 DCAF12L2Q5VW00 463 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms