RNA–Protein interactions for RNA: ENST00000563901.5

SH3GL3-205, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-205ENST00000563901 LIPAP38571 399 aa23.18■■□□□ 1.3
SH3GL3-205ENST00000563901 SSX1Q16384 188 aa23.18■■□□□ 1.3
SH3GL3-205ENST00000563901 ZNF672Q499Z4 452 aaPredicted RBP23.18■■□□□ 1.3
SH3GL3-205ENST00000563901 ZNF544Q6NX49 715 aa23.18■■□□□ 1.3
SH3GL3-205ENST00000563901 UFD1Q92890 307 aa23.18■■□□□ 1.3
SH3GL3-205ENST00000563901 CMBLQ96DG6 245 aa23.18■■□□□ 1.3
SH3GL3-205ENST00000563901 ISYNA1Q9NPH2 558 aa23.18■■□□□ 1.3
SH3GL3-205ENST00000563901 PLPP2O43688 288 aa23.17■■□□□ 1.3
SH3GL3-205ENST00000563901 CPEP16870 476 aa23.17■■□□□ 1.3
SH3GL3-205ENST00000563901 ALKBH6Q3KRA9 238 aa23.17■■□□□ 1.3
SH3GL3-205ENST00000563901 SYT6Q5T7P8 510 aaPredicted RBP23.17■■□□□ 1.3
SH3GL3-205ENST00000563901 UNQ6126/PRO20091Q6UXV3 157 aa23.17■■□□□ 1.3
SH3GL3-205ENST00000563901 MRPL21Q7Z2W9 205 aaKnown RBP23.17■■□□□ 1.3
SH3GL3-205ENST00000563901 ZNF295-AS1Q8N0V1 137 aa23.17■■□□□ 1.3
SH3GL3-205ENST00000563901 SPSB4Q96A44 273 aa23.17■■□□□ 1.3
SH3GL3-205ENST00000563901 SYT3Q9BQG1 590 aa23.17■■□□□ 1.3
SH3GL3-205ENST00000563901 VCX3AQ9NNX9 186 aa23.17■■□□□ 1.3
SH3GL3-205ENST00000563901 CISD1Q9NZ45 108 aaKnown RBP23.17■■□□□ 1.3
SH3GL3-205ENST00000563901 MYEF2Q9P2K5 600 aaKnown RBP23.17■■□□□ 1.3
SH3GL3-205ENST00000563901 RAI1Q7Z5J4 1906 aaPredicted RBP23.16■■□□□ 1.3
SH3GL3-205ENST00000563901 hCG_38984A0A1B0GV85 526 aa23.16■■□□□ 1.3
SH3GL3-205ENST00000563901 FAM221AA4D161 298 aa23.16■■□□□ 1.3
SH3GL3-205ENST00000563901 TMEM212A6NML5 194 aa23.16■■□□□ 1.3
SH3GL3-205ENST00000563901 UBCP0CG48 685 aaKnown RBP23.16■■□□□ 1.3
SH3GL3-205ENST00000563901 FAM3AP98173 230 aa23.16■■□□□ 1.3
SH3GL3-205ENST00000563901 TNK1Q13470 666 aa23.16■■□□□ 1.3
SH3GL3-205ENST00000563901 TPBGQ13641 420 aa23.16■■□□□ 1.3
SH3GL3-205ENST00000563901 ADIPOQQ15848 244 aa23.16■■□□□ 1.3
SH3GL3-205ENST00000563901 PGAP1Q75T13 922 aa23.16■■□□□ 1.3
SH3GL3-205ENST00000563901 PHC2Q8IXK0 858 aa23.16■■□□□ 1.3
SH3GL3-205ENST00000563901 TMED9Q9BVK6 235 aa23.16■■□□□ 1.3
SH3GL3-205ENST00000563901 REPIN1Q9BWE0 567 aaKnown RBP23.16■■□□□ 1.3
SH3GL3-205ENST00000563901 COMMD4Q9H0A8 199 aa23.16■■□□□ 1.3
SH3GL3-205ENST00000563901 CTAG2O75638 210 aa23.15■■□□□ 1.3
SH3GL3-205ENST00000563901 TFAP2AP05549 437 aa23.15■■□□□ 1.3
SH3GL3-205ENST00000563901 JUNBP17275 347 aaPredicted RBP23.15■■□□□ 1.3
SH3GL3-205ENST00000563901 RPS25P62851 125 aaKnown RBP23.15■■□□□ 1.3
SH3GL3-205ENST00000563901 PSG7Q13046 419 aa23.15■■□□□ 1.3
SH3GL3-205ENST00000563901 OR2T2Q6IF00 324 aa23.15■■□□□ 1.3
SH3GL3-205ENST00000563901 FBXW12Q6X9E4 464 aa23.15■■□□□ 1.3
SH3GL3-205ENST00000563901 TMEM203Q969S6 136 aa23.15■■□□□ 1.3
SH3GL3-205ENST00000563901 TMIGD2Q96BF3 282 aa23.15■■□□□ 1.3
SH3GL3-205ENST00000563901 MRPL37Q9BZE1 423 aaKnown RBP23.15■■□□□ 1.3
SH3GL3-205ENST00000563901 DUSP13Q9UII6 198 aa23.15■■□□□ 1.3
SH3GL3-205ENST00000563901 A6NIN4 97 aa23.15■■□□□ 1.3
SH3GL3-205ENST00000563901 LILRA1O75019 489 aa23.15■■□□□ 1.3
SH3GL3-205ENST00000563901 OR4A8P0C604 315 aa23.15■■□□□ 1.3
SH3GL3-205ENST00000563901 ACKR3P25106 362 aa23.15■■□□□ 1.3
SH3GL3-205ENST00000563901 RPS23P62266 143 aaKnown RBP23.15■■□□□ 1.3
SH3GL3-205ENST00000563901 INSL4Q14641 139 aa23.15■■□□□ 1.3
SH3GL3-205ENST00000563901 ZNF718Q3SXZ3 478 aa23.15■■□□□ 1.3
SH3GL3-205ENST00000563901 OR5AS1Q8N127 324 aa23.15■■□□□ 1.3
SH3GL3-205ENST00000563901 BHLHE23Q8NDY6 225 aa23.15■■□□□ 1.3
SH3GL3-205ENST00000563901 ZNF442Q9H7R0 627 aa23.15■■□□□ 1.3
SH3GL3-205ENST00000563901 A0A1B0GVI7 797 aa23.14■■□□□ 1.29
SH3GL3-205ENST00000563901 SYT7O43581 403 aa23.14■■□□□ 1.29
SH3GL3-205ENST00000563901 ISG15P05161 165 aa23.14■■□□□ 1.29
SH3GL3-205ENST00000563901 ZNF250P15622 560 aa23.14■■□□□ 1.29
SH3GL3-205ENST00000563901 GSK3AP49840 483 aa23.14■■□□□ 1.29
SH3GL3-205ENST00000563901 RPS11P62280 158 aaKnown RBP eCLIP23.14■■□□□ 1.29
SH3GL3-205ENST00000563901 MBNL2Q5VZF2 373 aaKnown RBP23.14■■□□□ 1.29
SH3GL3-205ENST00000563901 SYNPRQ8TBG9 265 aa23.14■■□□□ 1.29
SH3GL3-205ENST00000563901 RGCCQ9H4X1 137 aa23.14■■□□□ 1.29
SH3GL3-205ENST00000563901 SCOCQ9UIL1 159 aa23.14■■□□□ 1.29
SH3GL3-205ENST00000563901 ZNF281Q9Y2X9 895 aa23.14■■□□□ 1.29
SH3GL3-205ENST00000563901 CMAHPQ9Y471 501 aa23.14■■□□□ 1.29
SH3GL3-205ENST00000563901 ACHEP22303 614 aa23.13■■□□□ 1.29
SH3GL3-205ENST00000563901 CCL1P22362 96 aa23.13■■□□□ 1.29
SH3GL3-205ENST00000563901 GCH1P30793 250 aa23.13■■□□□ 1.29
SH3GL3-205ENST00000563901 TMEM244Q5VVB8 128 aa23.13■■□□□ 1.29
SH3GL3-205ENST00000563901 OR56B2PQ8NGI1 322 aa23.13■■□□□ 1.29
SH3GL3-205ENST00000563901 MRPL24Q96A35 216 aaKnown RBP23.13■■□□□ 1.29
SH3GL3-205ENST00000563901 SF3B6Q9Y3B4 125 aaKnown RBP23.13■■□□□ 1.29
SH3GL3-205ENST00000563901 RAC2P15153 192 aa23.12■■□□□ 1.29
SH3GL3-205ENST00000563901 ZNF787Q6DD87 383 aa23.12■■□□□ 1.29
SH3GL3-205ENST00000563901 PLPP7Q8NBV4 271 aa23.12■■□□□ 1.29
SH3GL3-205ENST00000563901 OR14K1Q8NGZ2 314 aa23.12■■□□□ 1.29
SH3GL3-205ENST00000563901 HAVCR1Q96D42 359 aa23.12■■□□□ 1.29
SH3GL3-205ENST00000563901 CLEC4MQ9H2X3 399 aaPredicted RBP23.12■■□□□ 1.29
SH3GL3-205ENST00000563901 UBTD1Q9HAC8 227 aa23.12■■□□□ 1.29
SH3GL3-205ENST00000563901 HHLA2Q9UM44 414 aa23.12■■□□□ 1.29
SH3GL3-205ENST00000563901 PTPN13Q12923 2485 aa23.12■■□□□ 1.29
SH3GL3-205ENST00000563901 GGT3PA6NGU5 568 aa23.11■■□□□ 1.29
SH3GL3-205ENST00000563901 DHRS3O75911 302 aa23.11■■□□□ 1.29
SH3GL3-205ENST00000563901 TGFBR2P37173 567 aa23.11■■□□□ 1.29
SH3GL3-205ENST00000563901 SOX2P48431 317 aa23.11■■□□□ 1.29
SH3GL3-205ENST00000563901 OR8B8Q15620 311 aa23.11■■□□□ 1.29
SH3GL3-205ENST00000563901 DOK3Q7L591 496 aa23.11■■□□□ 1.29
SH3GL3-205ENST00000563901 GTF3AQ92664 365 aaKnown RBP23.11■■□□□ 1.29
SH3GL3-205ENST00000563901 DHRS9Q9BPW9 319 aa23.11■■□□□ 1.29
SH3GL3-205ENST00000563901 PPP1R3EQ9H7J1 279 aa23.11■■□□□ 1.29
SH3GL3-205ENST00000563901 NDUFB11Q9NX14 153 aa23.11■■□□□ 1.29
SH3GL3-205ENST00000563901 PURGQ9UJV8 347 aaKnown RBP23.11■■□□□ 1.29
SH3GL3-205ENST00000563901 CD300LBA8K4G0 201 aa23.11■■□□□ 1.29
SH3GL3-205ENST00000563901 CCRL2O00421 344 aa23.11■■□□□ 1.29
SH3GL3-205ENST00000563901 HS3ST1O14792 307 aa23.11■■□□□ 1.29
SH3GL3-205ENST00000563901 FAHP16930 419 aa23.11■■□□□ 1.29
SH3GL3-205ENST00000563901 ALDH3B2P48448 385 aa23.11■■□□□ 1.29
SH3GL3-205ENST00000563901 KLF3P57682 345 aaPredicted RBP23.11■■□□□ 1.29
SH3GL3-205ENST00000563901 TLE4Q04727 773 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms