RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 POLR2JP52435 117 aaKnown RBP6.19□□□□□ -1.42
HERPUD1-206ENST00000563343 CRYBA2P53672 197 aa6.19□□□□□ -1.42
HERPUD1-206ENST00000563343 CTXN1P60606 82 aa6.19□□□□□ -1.42
HERPUD1-206ENST00000563343 LSM6P62312 80 aaKnown RBP6.19□□□□□ -1.42
HERPUD1-206ENST00000563343 DGCR2P98153 550 aa6.19□□□□□ -1.42
HERPUD1-206ENST00000563343 OR8G1Q15617 311 aa6.19□□□□□ -1.42
HERPUD1-206ENST00000563343 ARSJQ5FYB0 599 aaPredicted RBP6.19□□□□□ -1.42
HERPUD1-206ENST00000563343 ATPAF1Q5TC12 328 aaPredicted RBP6.19□□□□□ -1.42
HERPUD1-206ENST00000563343 STUMQ69YW2 141 aa6.19□□□□□ -1.42
HERPUD1-206ENST00000563343 ADAMTSL5Q6ZMM2 481 aa6.19□□□□□ -1.42
HERPUD1-206ENST00000563343 KRT77Q7Z794 578 aa6.19□□□□□ -1.42
HERPUD1-206ENST00000563343 WDR86Q86TI4 376 aa6.19□□□□□ -1.42
HERPUD1-206ENST00000563343 TMEM219Q86XT9 240 aa6.19□□□□□ -1.42
HERPUD1-206ENST00000563343 IFT20Q8IY31 132 aa6.19□□□□□ -1.42
HERPUD1-206ENST00000563343 C11orf42Q8N5U0 333 aa6.19□□□□□ -1.42
HERPUD1-206ENST00000563343 GOLGA6L1Q8N7Z2 621 aa6.19□□□□□ -1.42
HERPUD1-206ENST00000563343 Q8NFD4 153 aa6.19□□□□□ -1.42
HERPUD1-206ENST00000563343 RCHY1Q96PM5 261 aa6.19□□□□□ -1.42
HERPUD1-206ENST00000563343 COQ7Q99807 217 aa6.19□□□□□ -1.42
HERPUD1-206ENST00000563343 ADAT1Q9BUB4 502 aaKnown RBP6.19□□□□□ -1.42
HERPUD1-206ENST00000563343 ADA2Q9NZK5 511 aa6.19□□□□□ -1.42
HERPUD1-206ENST00000563343 VSX1Q9NZR4 365 aaPredicted RBP6.19□□□□□ -1.42
HERPUD1-206ENST00000563343 SF3B6Q9Y3B4 125 aaKnown RBP6.19□□□□□ -1.42
HERPUD1-206ENST00000563343 PLECQ15149 4684 aaKnown RBP6.19□□□□□ -1.42
HERPUD1-206ENST00000563343 TRBV23-1A0A0A0MS06 115 aa6.18□□□□□ -1.42
HERPUD1-206ENST00000563343 TCRBV4S1A1TA0A5B7 111 aa6.18□□□□□ -1.42
HERPUD1-206ENST00000563343 A6NIZ1 184 aa6.18□□□□□ -1.42
HERPUD1-206ENST00000563343 CD300LBA8K4G0 201 aa6.18□□□□□ -1.42
HERPUD1-206ENST00000563343 M0QX08 132 aa6.18□□□□□ -1.42
HERPUD1-206ENST00000563343 IMPA2O14732 288 aa6.18□□□□□ -1.42
HERPUD1-206ENST00000563343 NDUFB3O43676 98 aa6.18□□□□□ -1.42
HERPUD1-206ENST00000563343 GMDSO60547 372 aa6.18□□□□□ -1.42
HERPUD1-206ENST00000563343 GRPP07492 148 aa6.18□□□□□ -1.42
HERPUD1-206ENST00000563343 VDAC2P45880 294 aaPredicted RBP6.18□□□□□ -1.42
HERPUD1-206ENST00000563343 THBS3P49746 956 aa6.18□□□□□ -1.42
HERPUD1-206ENST00000563343 RAP1BP61224 184 aa6.18□□□□□ -1.42
HERPUD1-206ENST00000563343 RAP1AP62834 184 aa6.18□□□□□ -1.42
HERPUD1-206ENST00000563343 IKZF1Q13422 519 aa6.18□□□□□ -1.42
HERPUD1-206ENST00000563343 KCNMB1Q16558 191 aa6.18□□□□□ -1.42
HERPUD1-206ENST00000563343 MESTQ5EB52 335 aa6.18□□□□□ -1.42
HERPUD1-206ENST00000563343 LDLRAD2Q5SZI1 272 aa6.18□□□□□ -1.42
HERPUD1-206ENST00000563343 ZFAND6Q6FIF0 208 aa6.18□□□□□ -1.42
HERPUD1-206ENST00000563343 C10orf99Q6UWK7 81 aa6.18□□□□□ -1.42
HERPUD1-206ENST00000563343 SLC36A1Q7Z2H8 476 aa6.18□□□□□ -1.42
HERPUD1-206ENST00000563343 FAM122BQ7Z309 247 aa6.18□□□□□ -1.42
HERPUD1-206ENST00000563343 UBLCP1Q8WVY7 318 aaPredicted RBP6.18□□□□□ -1.42
HERPUD1-206ENST00000563343 TMEM239Q8WW34 195 aa6.18□□□□□ -1.42
HERPUD1-206ENST00000563343 TFAP2CQ92754 450 aa6.18□□□□□ -1.42
HERPUD1-206ENST00000563343 SLCO4A1Q96BD0 722 aa6.18□□□□□ -1.42
HERPUD1-206ENST00000563343 CITED4Q96RK1 184 aa6.18□□□□□ -1.42
HERPUD1-206ENST00000563343 SLC22A4Q9H015 551 aa6.18□□□□□ -1.42
HERPUD1-206ENST00000563343 RNPEPL1Q9HAU8 725 aa6.18□□□□□ -1.42
HERPUD1-206ENST00000563343 LGALS13Q9UHV8 139 aa6.18□□□□□ -1.42
HERPUD1-206ENST00000563343 LHFPL6Q9Y693 200 aa6.18□□□□□ -1.42
HERPUD1-206ENST00000563343 TLDC2A0PJX2 215 aa6.17□□□□□ -1.42
HERPUD1-206ENST00000563343 A6NLC8 198 aa6.17□□□□□ -1.42
HERPUD1-206ENST00000563343 BIRC5O15392 142 aa6.17□□□□□ -1.42
HERPUD1-206ENST00000563343 RAMP3O60896 148 aa6.17□□□□□ -1.42
HERPUD1-206ENST00000563343 PEX14O75381 377 aa6.17□□□□□ -1.42
HERPUD1-206ENST00000563343 TFF1P04155 84 aa6.17□□□□□ -1.42
HERPUD1-206ENST00000563343 CAV3P56539 151 aa6.17□□□□□ -1.42
HERPUD1-206ENST00000563343 DGUOKQ16854 277 aa6.17□□□□□ -1.42
HERPUD1-206ENST00000563343 MICBQ29980 383 aa6.17□□□□□ -1.42
HERPUD1-206ENST00000563343 LRRC10Q5BKY1 277 aa6.17□□□□□ -1.42
HERPUD1-206ENST00000563343 RABL3Q5HYI8 236 aa6.17□□□□□ -1.42
HERPUD1-206ENST00000563343 PAGE3Q5JUK9 113 aa6.17□□□□□ -1.42
HERPUD1-206ENST00000563343 WDR82Q6UXN9 313 aa6.17□□□□□ -1.42
HERPUD1-206ENST00000563343 ZNF788Q6ZQV5 615 aa6.17□□□□□ -1.42
HERPUD1-206ENST00000563343 PGAP1Q75T13 922 aa6.17□□□□□ -1.42
HERPUD1-206ENST00000563343 MEPCEQ7L2J0 689 aaKnown RBP6.17□□□□□ -1.42
HERPUD1-206ENST00000563343 MAVSQ7Z434 540 aa6.17□□□□□ -1.42
HERPUD1-206ENST00000563343 LHFPL4Q7Z7J7 247 aa6.17□□□□□ -1.42
HERPUD1-206ENST00000563343 SBSPONQ8IVN8 264 aa6.17□□□□□ -1.42
HERPUD1-206ENST00000563343 FUNDC1Q8IVP5 155 aa6.17□□□□□ -1.42
HERPUD1-206ENST00000563343 MKXQ8IYA7 352 aa6.17□□□□□ -1.42
HERPUD1-206ENST00000563343 KIRREL3Q8IZU9 778 aa6.17□□□□□ -1.42
HERPUD1-206ENST00000563343 LRRC29Q8WV35 223 aa6.17□□□□□ -1.42
HERPUD1-206ENST00000563343 H1FXQ92522 213 aaKnown RBP6.17□□□□□ -1.42
HERPUD1-206ENST00000563343 TAMM41Q96BW9 452 aa6.17□□□□□ -1.42
HERPUD1-206ENST00000563343 C12orf43Q96C57 262 aaKnown RBP6.17□□□□□ -1.42
HERPUD1-206ENST00000563343 DUS3LQ96G46 650 aaKnown RBP6.17□□□□□ -1.42
HERPUD1-206ENST00000563343 Q96M85 177 aa6.17□□□□□ -1.42
HERPUD1-206ENST00000563343 GAFA1Q96PS6 74 aa6.17□□□□□ -1.42
HERPUD1-206ENST00000563343 PRR25Q96S07 402 aa6.17□□□□□ -1.42
HERPUD1-206ENST00000563343 MCRIP2Q9BUT9 160 aaKnown RBP6.17□□□□□ -1.42
HERPUD1-206ENST00000563343 HDHD2Q9H0R4 259 aa6.17□□□□□ -1.42
HERPUD1-206ENST00000563343 PALMDQ9NP74 551 aa6.17□□□□□ -1.42
HERPUD1-206ENST00000563343 PNRC2Q9NPJ4 139 aaKnown RBP6.17□□□□□ -1.42
HERPUD1-206ENST00000563343 AURKCQ9UQB9 309 aa6.17□□□□□ -1.42
HERPUD1-206ENST00000563343 COA3Q9Y2R0 106 aaPredicted RBP6.17□□□□□ -1.42
HERPUD1-206ENST00000563343 NOP16Q9Y3C1 178 aaKnown RBP6.17□□□□□ -1.42
HERPUD1-206ENST00000563343 TRAV27A0A087WT01 109 aa6.16□□□□□ -1.42
HERPUD1-206ENST00000563343 hCG_1807616A0A1W2PRN6 198 aa6.16□□□□□ -1.42
HERPUD1-206ENST00000563343 PRSS37A4D1T9 235 aa6.16□□□□□ -1.42
HERPUD1-206ENST00000563343 F2RL2O00254 374 aa6.16□□□□□ -1.42
HERPUD1-206ENST00000563343 AHCYL1O43865 530 aa6.16□□□□□ -1.42
HERPUD1-206ENST00000563343 CLIC3O95833 236 aa6.16□□□□□ -1.42
HERPUD1-206ENST00000563343 IFNW1P05000 195 aa6.16□□□□□ -1.42
HERPUD1-206ENST00000563343 PPIBP23284 216 aaKnown RBP6.16□□□□□ -1.42
HERPUD1-206ENST00000563343 CSNK2BP67870 215 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms