RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 LOC100509620A0A075B734 347 aa9.76□□□□□ -0.85
USP3-218ENST00000560202 IQCMA0A1B0GVH7 501 aa9.76□□□□□ -0.85
USP3-218ENST00000560202 A0A1W2PR80 420 aa9.76□□□□□ -0.85
USP3-218ENST00000560202 SHISA3A0PJX4 238 aa9.76□□□□□ -0.85
USP3-218ENST00000560202 EEF1E1-BLOC1S5C9J1V9 151 aa9.76□□□□□ -0.85
USP3-218ENST00000560202 ATXN7O15265 892 aaPredicted RBP9.76□□□□□ -0.85
USP3-218ENST00000560202 PIN1P1O15428 100 aa9.76□□□□□ -0.85
USP3-218ENST00000560202 EEF1E1O43324 174 aaKnown RBP9.76□□□□□ -0.85
USP3-218ENST00000560202 IL1AP01583 271 aa9.76□□□□□ -0.85
USP3-218ENST00000560202 ANOS1P23352 680 aa9.76□□□□□ -0.85
USP3-218ENST00000560202 STOMP27105 288 aa9.76□□□□□ -0.85
USP3-218ENST00000560202 MAPK3P27361 379 aaPredicted RBP9.76□□□□□ -0.85
USP3-218ENST00000560202 HOXC12P31275 282 aa9.76□□□□□ -0.85
USP3-218ENST00000560202 SDC2P34741 201 aa9.76□□□□□ -0.85
USP3-218ENST00000560202 SOX6P35712 828 aa9.76□□□□□ -0.85
USP3-218ENST00000560202 MTNR1BP49286 362 aa9.76□□□□□ -0.85
USP3-218ENST00000560202 HGFACQ04756 655 aa9.76□□□□□ -0.85
USP3-218ENST00000560202 MXD1Q05195 221 aa9.76□□□□□ -0.85
USP3-218ENST00000560202 HSD17B12Q53GQ0 312 aa9.76□□□□□ -0.85
USP3-218ENST00000560202 IDO2Q6ZQW0 420 aa9.76□□□□□ -0.85
USP3-218ENST00000560202 GDPD3Q7L5L3 318 aa9.76□□□□□ -0.85
USP3-218ENST00000560202 BHLHA15Q7RTS1 189 aaPredicted RBP9.76□□□□□ -0.85
USP3-218ENST00000560202 MRGPRGQ86SM5 289 aa9.76□□□□□ -0.85
USP3-218ENST00000560202 ZNF584Q8IVC4 421 aa9.76□□□□□ -0.85
USP3-218ENST00000560202 CCDC28AQ8IWP9 274 aa9.76□□□□□ -0.85
USP3-218ENST00000560202 WDR31Q8NA23 367 aa9.76□□□□□ -0.85
USP3-218ENST00000560202 OR51E1Q8TCB6 317 aa9.76□□□□□ -0.85
USP3-218ENST00000560202 TSEN15Q8WW01 171 aaKnown RBP9.76□□□□□ -0.85
USP3-218ENST00000560202 ZNF75AQ96N20 296 aa9.76□□□□□ -0.85
USP3-218ENST00000560202 DERL3Q96Q80 235 aa9.76□□□□□ -0.85
USP3-218ENST00000560202 NOX4Q9NPH5 578 aa9.76□□□□□ -0.85
USP3-218ENST00000560202 SNTG1Q9NSN8 517 aa9.76□□□□□ -0.85
USP3-218ENST00000560202 DHDHQ9UQ10 334 aa9.76□□□□□ -0.85
USP3-218ENST00000560202 SPTA1P02549 2419 aa9.75□□□□□ -0.85
USP3-218ENST00000560202 A0A075B6Q4 140 aa9.75□□□□□ -0.85
USP3-218ENST00000560202 TRBV5-7A0A0A0MS05 114 aa9.75□□□□□ -0.85
USP3-218ENST00000560202 A0A1B0GTI1 187 aa9.75□□□□□ -0.85
USP3-218ENST00000560202 LOC105371267A0A1B0GV96 52 aa9.75□□□□□ -0.85
USP3-218ENST00000560202 C5orf63A6NC05 138 aa9.75□□□□□ -0.85
USP3-218ENST00000560202 CCL21O00585 134 aa9.75□□□□□ -0.85
USP3-218ENST00000560202 CASKO14936 926 aa9.75□□□□□ -0.85
USP3-218ENST00000560202 SYT7O43581 403 aa9.75□□□□□ -0.85
USP3-218ENST00000560202 LCATP04180 440 aa9.75□□□□□ -0.85
USP3-218ENST00000560202 SERPINA5P05154 406 aa9.75□□□□□ -0.85
USP3-218ENST00000560202 CLEC2LP0C7M8 214 aa9.75□□□□□ -0.85
USP3-218ENST00000560202 PSMB1P20618 241 aaKnown RBP9.75□□□□□ -0.85
USP3-218ENST00000560202 MYL9P24844 172 aa9.75□□□□□ -0.85
USP3-218ENST00000560202 MRPL49Q13405 166 aaKnown RBP9.75□□□□□ -0.85
USP3-218ENST00000560202 STAC2Q6ZMT1 411 aa9.75□□□□□ -0.85
USP3-218ENST00000560202 ZNF767PQ75MW2 155 aa9.75□□□□□ -0.85
USP3-218ENST00000560202 PARP16Q8N5Y8 322 aa9.75□□□□□ -0.85
USP3-218ENST00000560202 OR52H1Q8NGJ2 320 aa9.75□□□□□ -0.85
USP3-218ENST00000560202 ASB5Q8WWX0 329 aa9.75□□□□□ -0.85
USP3-218ENST00000560202 THRSPQ92748 146 aa9.75□□□□□ -0.85
USP3-218ENST00000560202 TMEM106AQ96A25 262 aa9.75□□□□□ -0.85
USP3-218ENST00000560202 POM121L2Q96KW2 1035 aa9.75□□□□□ -0.85
USP3-218ENST00000560202 OR10A2Q9H208 303 aa9.75□□□□□ -0.85
USP3-218ENST00000560202 OBP2BQ9NPH6 170 aa9.75□□□□□ -0.85
USP3-218ENST00000560202 TPRP12270 2363 aaKnown RBP9.75□□□□□ -0.85
USP3-218ENST00000560202 CACNA1CQ13936 2221 aa9.75□□□□□ -0.85
USP3-218ENST00000560202 NCOA6Q14686 2063 aaPredicted RBP9.75□□□□□ -0.85
USP3-218ENST00000560202 TRAV1-2A0A0B4J238 106 aa9.74□□□□□ -0.85
USP3-218ENST00000560202 A0A0U1RQV5 110 aa9.74□□□□□ -0.85
USP3-218ENST00000560202 A0A1B0GVI7 797 aa9.74□□□□□ -0.85
USP3-218ENST00000560202 C5orf49A4QMS7 147 aa9.74□□□□□ -0.85
USP3-218ENST00000560202 OR5H1A6NKK0 313 aa9.74□□□□□ -0.85
USP3-218ENST00000560202 IGLV3-1P01715 115 aa9.74□□□□□ -0.85
USP3-218ENST00000560202 RAF1P04049 648 aa9.74□□□□□ -0.85
USP3-218ENST00000560202 CCL2P13500 99 aa9.74□□□□□ -0.85
USP3-218ENST00000560202 CBR1P16152 277 aa9.74□□□□□ -0.85
USP3-218ENST00000560202 ZNF14P17017 642 aaPredicted RBP9.74□□□□□ -0.85
USP3-218ENST00000560202 SRMP19623 302 aa9.74□□□□□ -0.85
USP3-218ENST00000560202 CCNOP22674 350 aa9.74□□□□□ -0.85
USP3-218ENST00000560202 IL32P24001 234 aa9.74□□□□□ -0.85
USP3-218ENST00000560202 ERP29P30040 261 aaKnown RBP9.74□□□□□ -0.85
USP3-218ENST00000560202 APLNRP35414 380 aa9.74□□□□□ -0.85
USP3-218ENST00000560202 AP2S1P53680 142 aaPredicted RBP9.74□□□□□ -0.85
USP3-218ENST00000560202 GFOD2Q3B7J2 385 aa9.74□□□□□ -0.85
USP3-218ENST00000560202 SNAI3Q3KNW1 292 aa9.74□□□□□ -0.85
USP3-218ENST00000560202 COMMD2Q86X83 199 aa9.74□□□□□ -0.85
USP3-218ENST00000560202 SNX29P2Q8IUI4 249 aa9.74□□□□□ -0.85
USP3-218ENST00000560202 RELL2Q8NC24 303 aaPredicted RBP9.74□□□□□ -0.85
USP3-218ENST00000560202 OR13C3Q8NGS6 347 aa9.74□□□□□ -0.85
USP3-218ENST00000560202 SLC25A46Q96AG3 418 aa9.74□□□□□ -0.85
USP3-218ENST00000560202 ORAI1Q96D31 301 aa9.74□□□□□ -0.85
USP3-218ENST00000560202 MS4A3Q96HJ5 214 aa9.74□□□□□ -0.85
USP3-218ENST00000560202 KCNS3Q9BQ31 491 aa9.74□□□□□ -0.85
USP3-218ENST00000560202 TMEM246Q9BRR3 403 aa9.74□□□□□ -0.85
USP3-218ENST00000560202 GPR84Q9NQS5 396 aa9.74□□□□□ -0.85
USP3-218ENST00000560202 JKAMPQ9P055 326 aa9.74□□□□□ -0.85
USP3-218ENST00000560202 USP24Q9UPU5 2620 aa9.74□□□□□ -0.85
USP3-218ENST00000560202 SMIM30A4D0T7 59 aa9.74□□□□□ -0.85
USP3-218ENST00000560202 SHOXO15266 292 aa9.74□□□□□ -0.85
USP3-218ENST00000560202 ICMTO60725 284 aa9.74□□□□□ -0.85
USP3-218ENST00000560202 AGFG2O95081 481 aa9.74□□□□□ -0.85
USP3-218ENST00000560202 CD2P06729 351 aa9.74□□□□□ -0.85
USP3-218ENST00000560202 CCL1P22362 96 aa9.74□□□□□ -0.85
USP3-218ENST00000560202 RORCP51449 518 aa9.74□□□□□ -0.85
USP3-218ENST00000560202 NKX2-5P52952 324 aaPredicted RBP9.74□□□□□ -0.85
USP3-218ENST00000560202 FAM27E3Q08E93 113 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms