RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 CX3CR1P49238 355 aa14.36□□□□□ -0.11
TPM1-219ENST00000559397 ZNF121P58317 390 aaPredicted RBP14.36□□□□□ -0.11
TPM1-219ENST00000559397 UBE2NP61088 152 aaKnown RBP14.36□□□□□ -0.11
TPM1-219ENST00000559397 IFITM3Q01628 133 aa14.36□□□□□ -0.11
TPM1-219ENST00000559397 SCRN3Q0VDG4 424 aa14.36□□□□□ -0.11
TPM1-219ENST00000559397 RAB35Q15286 201 aa14.36□□□□□ -0.11
TPM1-219ENST00000559397 TAB1Q15750 504 aa14.36□□□□□ -0.11
TPM1-219ENST00000559397 ASPHD2Q6ICH7 369 aa14.36□□□□□ -0.11
TPM1-219ENST00000559397 OBP2BQ9NPH6 170 aa14.36□□□□□ -0.11
TPM1-219ENST00000559397 ABRACLQ9P1F3 81 aa14.36□□□□□ -0.11
TPM1-219ENST00000559397 AMDHD2Q9Y303 409 aa14.36□□□□□ -0.11
TPM1-219ENST00000559397 PRR14LQ5THK1 2151 aa14.35□□□□□ -0.11
TPM1-219ENST00000559397 A0A1B0GTI1 187 aa14.35□□□□□ -0.11
TPM1-219ENST00000559397 C19orf84I3L1E1 186 aa14.35□□□□□ -0.11
TPM1-219ENST00000559397 P2RY10O00398 339 aa14.35□□□□□ -0.11
TPM1-219ENST00000559397 HPGDSO60760 199 aa14.35□□□□□ -0.11
TPM1-219ENST00000559397 UBL3O95164 117 aa14.35□□□□□ -0.11
TPM1-219ENST00000559397 SLC2A2P11168 524 aaPredicted RBP14.35□□□□□ -0.11
TPM1-219ENST00000559397 PPP3CBP16298 524 aa14.35□□□□□ -0.11
TPM1-219ENST00000559397 FSTP19883 344 aa14.35□□□□□ -0.11
TPM1-219ENST00000559397 EVX1P49640 407 aa14.35□□□□□ -0.11
TPM1-219ENST00000559397 PCBD1P61457 104 aa14.35□□□□□ -0.11
TPM1-219ENST00000559397 ECH1Q13011 328 aa14.35□□□□□ -0.11
TPM1-219ENST00000559397 KRTAP27-1Q3LI81 207 aa14.35□□□□□ -0.11
TPM1-219ENST00000559397 SLC36A2Q495M3 483 aa14.35□□□□□ -0.11
TPM1-219ENST00000559397 C1QTNF12Q5T7M4 302 aa14.35□□□□□ -0.11
TPM1-219ENST00000559397 DPPA2Q7Z7J5 298 aa14.35□□□□□ -0.11
TPM1-219ENST00000559397 OR8B12Q8NGG6 310 aa14.35□□□□□ -0.11
TPM1-219ENST00000559397 NANOS1Q8WY41 292 aaKnown RBP14.35□□□□□ -0.11
TPM1-219ENST00000559397 ZNF75AQ96N20 296 aa14.35□□□□□ -0.11
TPM1-219ENST00000559397 WFIKKN1Q96NZ8 548 aa14.35□□□□□ -0.11
TPM1-219ENST00000559397 SDHCQ99643 169 aaPredicted RBP14.35□□□□□ -0.11
TPM1-219ENST00000559397 HDHD2Q9H0R4 259 aa14.35□□□□□ -0.11
TPM1-219ENST00000559397 BRD7Q9NPI1 651 aa14.35□□□□□ -0.11
TPM1-219ENST00000559397 FOXJ3Q9UPW0 622 aa14.35□□□□□ -0.11
TPM1-219ENST00000559397 KLF2Q9Y5W3 355 aaPredicted RBP14.35□□□□□ -0.11
TPM1-219ENST00000559397 V9GY05 133 aa14.35□□□□□ -0.11
TPM1-219ENST00000559397 COL12A1Q99715 3063 aa14.34□□□□□ -0.11
TPM1-219ENST00000559397 OR6C6A6NF89 314 aa14.34□□□□□ -0.11
TPM1-219ENST00000559397 IFITM5A6NNB3 132 aa14.34□□□□□ -0.11
TPM1-219ENST00000559397 H3BSH0 61 aa14.34□□□□□ -0.11
TPM1-219ENST00000559397 AIPO00170 330 aa14.34□□□□□ -0.11
TPM1-219ENST00000559397 SGCEO43556 437 aa14.34□□□□□ -0.11
TPM1-219ENST00000559397 SYNGR3O43761 229 aa14.34□□□□□ -0.11
TPM1-219ENST00000559397 UPK1BO75841 260 aa14.34□□□□□ -0.11
TPM1-219ENST00000559397 CD2P06729 351 aa14.34□□□□□ -0.11
TPM1-219ENST00000559397 THBDP07204 575 aa14.34□□□□□ -0.11
TPM1-219ENST00000559397 CD37P11049 281 aa14.34□□□□□ -0.11
TPM1-219ENST00000559397 CD79AP11912 226 aa14.34□□□□□ -0.11
TPM1-219ENST00000559397 IGFBP3P17936 291 aaPredicted RBP14.34□□□□□ -0.11
TPM1-219ENST00000559397 CRYGSP22914 178 aa14.34□□□□□ -0.11
TPM1-219ENST00000559397 CFPP27918 469 aa14.34□□□□□ -0.11
TPM1-219ENST00000559397 HOXC12P31275 282 aa14.34□□□□□ -0.11
TPM1-219ENST00000559397 PSMD7P51665 324 aa14.34□□□□□ -0.11
TPM1-219ENST00000559397 RAB1AP62820 205 aa14.34□□□□□ -0.11
TPM1-219ENST00000559397 SNTB1Q13884 538 aaKnown RBP14.34□□□□□ -0.11
TPM1-219ENST00000559397 METAP1DQ6UB28 335 aaPredicted RBP14.34□□□□□ -0.11
TPM1-219ENST00000559397 SEZ6L2Q6UXD5 910 aa14.34□□□□□ -0.11
TPM1-219ENST00000559397 MDP1Q86V88 176 aa14.34□□□□□ -0.11
TPM1-219ENST00000559397 ZNF283Q8N7M2 679 aa14.34□□□□□ -0.11
TPM1-219ENST00000559397 DIRAS2Q96HU8 199 aa14.34□□□□□ -0.11
TPM1-219ENST00000559397 PLEK2Q9NYT0 353 aa14.34□□□□□ -0.11
TPM1-219ENST00000559397 ZNF319Q9P2F9 582 aa14.34□□□□□ -0.11
TPM1-219ENST00000559397 TIMM10BQ9Y5J6 103 aa14.34□□□□□ -0.11
TPM1-219ENST00000559397 HELZ2Q9BYK8 2649 aaKnown RBP14.34□□□□□ -0.11
TPM1-219ENST00000559397 DOK2O60496 412 aa14.33□□□□□ -0.11
TPM1-219ENST00000559397 IGLV3-1P01715 115 aa14.33□□□□□ -0.11
TPM1-219ENST00000559397 APOC1P02654 83 aa14.33□□□□□ -0.11
TPM1-219ENST00000559397 IGFBP2P18065 325 aa14.33□□□□□ -0.11
TPM1-219ENST00000559397 CCL1P22362 96 aa14.33□□□□□ -0.11
TPM1-219ENST00000559397 PSG4Q00888 419 aa14.33□□□□□ -0.11
TPM1-219ENST00000559397 PPA1Q15181 289 aa14.33□□□□□ -0.11
TPM1-219ENST00000559397 ZNF79Q15937 498 aa14.33□□□□□ -0.11
TPM1-219ENST00000559397 GSG1Q2KHT4 349 aa14.33□□□□□ -0.11
TPM1-219ENST00000559397 OR13C3Q8NGS6 347 aa14.33□□□□□ -0.11
TPM1-219ENST00000559397 LINC01560Q8TB33 94 aa14.33□□□□□ -0.11
TPM1-219ENST00000559397 CCDC32Q9BV29 185 aa14.33□□□□□ -0.11
TPM1-219ENST00000559397 OR2H1Q9GZK4 316 aa14.33□□□□□ -0.11
TPM1-219ENST00000559397 WNT5BQ9H1J7 359 aa14.33□□□□□ -0.11
TPM1-219ENST00000559397 ZNF275Q9NSD4 429 aaPredicted RBP14.33□□□□□ -0.11
TPM1-219ENST00000559397 ADAM30Q9UKF2 790 aa14.33□□□□□ -0.11
TPM1-219ENST00000559397 RTTNQ86VV8 2226 aa14.33□□□□□ -0.11
TPM1-219ENST00000559397 PAHP00439 452 aa14.33□□□□□ -0.12
TPM1-219ENST00000559397 IGKV3-15P01624 115 aa14.33□□□□□ -0.12
TPM1-219ENST00000559397 CBR1P16152 277 aa14.33□□□□□ -0.12
TPM1-219ENST00000559397 ANOS1P23352 680 aa14.33□□□□□ -0.12
TPM1-219ENST00000559397 PTBP1P26599 531 aaKnown RBP eCLIP14.33□□□□□ -0.125e-7■■■□□ 15.6
TPM1-219ENST00000559397 ARR3P36575 388 aa14.33□□□□□ -0.12
TPM1-219ENST00000559397 GALK2Q01415 458 aa14.33□□□□□ -0.12
TPM1-219ENST00000559397 ZNF181Q2M3W8 571 aa14.33□□□□□ -0.12
TPM1-219ENST00000559397 TMEM53Q6P2H8 277 aa14.33□□□□□ -0.12
TPM1-219ENST00000559397 CNIH2Q6PI25 160 aa14.33□□□□□ -0.12
TPM1-219ENST00000559397 ZNF584Q8IVC4 421 aa14.33□□□□□ -0.12
TPM1-219ENST00000559397 FAM169BQ8N8A8 192 aa14.33□□□□□ -0.12
TPM1-219ENST00000559397 ACBD4Q8NC06 268 aa14.33□□□□□ -0.12
TPM1-219ENST00000559397 OR1F12Q8NHA8 337 aa14.33□□□□□ -0.12
TPM1-219ENST00000559397 TRMT10AQ8TBZ6 339 aaKnown RBP14.33□□□□□ -0.12
TPM1-219ENST00000559397 SPTSSAQ969W0 71 aa14.33□□□□□ -0.12
TPM1-219ENST00000559397 MUCL1Q96DR8 90 aa14.33□□□□□ -0.12
TPM1-219ENST00000559397 SRRQ9GZT4 340 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms