RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 FAPQ12884 760 aa13.89□□□□□ -0.19
CDC42BPB-204ENST00000559043 MAB21L1Q13394 359 aa13.89□□□□□ -0.19
CDC42BPB-204ENST00000559043 ODF4Q2M2E3 257 aa13.89□□□□□ -0.19
CDC42BPB-204ENST00000559043 TMEM69Q5SWH9 247 aa13.89□□□□□ -0.19
CDC42BPB-204ENST00000559043 CARD17Q5XLA6 110 aa13.89□□□□□ -0.19
CDC42BPB-204ENST00000559043 MTFR2Q6P444 385 aa13.89□□□□□ -0.19
CDC42BPB-204ENST00000559043 DNM1P46Q6ZS02 220 aa13.89□□□□□ -0.19
CDC42BPB-204ENST00000559043 FAM214BQ7L5A3 538 aa13.89□□□□□ -0.19
CDC42BPB-204ENST00000559043 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.89□□□□□ -0.19
CDC42BPB-204ENST00000559043 SERPINA12Q8IW75 414 aa13.89□□□□□ -0.19
CDC42BPB-204ENST00000559043 OR52I2Q8NH67 350 aa13.89□□□□□ -0.19
CDC42BPB-204ENST00000559043 SLC22A13Q9Y226 551 aa13.89□□□□□ -0.19
CDC42BPB-204ENST00000559043 NOSIPQ9Y314 301 aaKnown RBP13.89□□□□□ -0.19
CDC42BPB-204ENST00000559043 LRP12Q9Y561 859 aa13.89□□□□□ -0.19
CDC42BPB-204ENST00000559043 KRT33AO76009 404 aa13.89□□□□□ -0.19
CDC42BPB-204ENST00000559043 IL2RAP01589 272 aa13.89□□□□□ -0.19
CDC42BPB-204ENST00000559043 IGHV3-9P01782 118 aa13.89□□□□□ -0.19
CDC42BPB-204ENST00000559043 MT-ND4P03905 459 aa13.89□□□□□ -0.19
CDC42BPB-204ENST00000559043 TMIGD3P0DMS9 266 aaPredicted RBP13.89□□□□□ -0.19
CDC42BPB-204ENST00000559043 CCR6P51684 374 aa13.89□□□□□ -0.19
CDC42BPB-204ENST00000559043 MFGE8Q08431 387 aaPredicted RBP13.89□□□□□ -0.19
CDC42BPB-204ENST00000559043 TNK1Q13470 666 aa13.89□□□□□ -0.19
CDC42BPB-204ENST00000559043 AAED1Q7RTV5 226 aa13.89□□□□□ -0.19
CDC42BPB-204ENST00000559043 CDH24Q86UP0 819 aa13.89□□□□□ -0.19
CDC42BPB-204ENST00000559043 FJX1Q86VR8 437 aa13.89□□□□□ -0.19
CDC42BPB-204ENST00000559043 ASCC1Q8N9N2 400 aaKnown RBP13.89□□□□□ -0.19
CDC42BPB-204ENST00000559043 OR6X1Q8NH79 312 aa13.89□□□□□ -0.19
CDC42BPB-204ENST00000559043 TSEN15Q8WW01 171 aaKnown RBP13.89□□□□□ -0.19
CDC42BPB-204ENST00000559043 FCAMRQ8WWV6 532 aa13.89□□□□□ -0.19
CDC42BPB-204ENST00000559043 STARD4Q96DR4 205 aa13.89□□□□□ -0.19
CDC42BPB-204ENST00000559043 ACTR6Q9GZN1 396 aa13.89□□□□□ -0.19
CDC42BPB-204ENST00000559043 C12orf49Q9H741 205 aa13.89□□□□□ -0.19
CDC42BPB-204ENST00000559043 GP6Q9HCN6 339 aa13.89□□□□□ -0.19
CDC42BPB-204ENST00000559043 PLSCR3Q9NRY6 295 aa13.89□□□□□ -0.19
CDC42BPB-204ENST00000559043 BOLA1Q9Y3E2 137 aa13.89□□□□□ -0.19
CDC42BPB-204ENST00000559043 CGAP01215 116 aa13.88□□□□□ -0.19
CDC42BPB-204ENST00000559043 PER3P56645 1201 aa13.88□□□□□ -0.19
CDC42BPB-204ENST00000559043 AP3S2P59780 193 aa13.88□□□□□ -0.19
CDC42BPB-204ENST00000559043 ASPHD2Q6ICH7 369 aa13.88□□□□□ -0.19
CDC42BPB-204ENST00000559043 OR2A2Q6IF42 318 aa13.88□□□□□ -0.19
CDC42BPB-204ENST00000559043 OR7E24Q6IFN5 339 aa13.88□□□□□ -0.19
CDC42BPB-204ENST00000559043 CNEP1R1Q8N9A8 125 aa13.88□□□□□ -0.19
CDC42BPB-204ENST00000559043 ZFAND1Q8TCF1 268 aa13.88□□□□□ -0.19
CDC42BPB-204ENST00000559043 ST7LQ8TDW4 575 aa13.88□□□□□ -0.19
CDC42BPB-204ENST00000559043 TMEM45BQ96B21 275 aa13.88□□□□□ -0.19
CDC42BPB-204ENST00000559043 ZNF837Q96EG3 531 aaPredicted RBP13.88□□□□□ -0.19
CDC42BPB-204ENST00000559043 SLC25A44Q96H78 314 aaPredicted RBP13.88□□□□□ -0.19
CDC42BPB-204ENST00000559043 TMEM246Q9BRR3 403 aa13.88□□□□□ -0.19
CDC42BPB-204ENST00000559043 HRASLSQ9HDD0 168 aa13.88□□□□□ -0.19
CDC42BPB-204ENST00000559043 GLRX2Q9NS18 164 aa13.88□□□□□ -0.19
CDC42BPB-204ENST00000559043 DIDO1Q9BTC0 2240 aaKnown RBP13.88□□□□□ -0.19
CDC42BPB-204ENST00000559043 IGKV1D-43A0A0B4J1Z2 117 aa13.87□□□□□ -0.19
CDC42BPB-204ENST00000559043 NAP1L6A6NFF2 107 aa13.87□□□□□ -0.19
CDC42BPB-204ENST00000559043 KHDRBS3O75525 346 aaKnown RBP13.87□□□□□ -0.19
CDC42BPB-204ENST00000559043 HRGP04196 525 aa13.87□□□□□ -0.19
CDC42BPB-204ENST00000559043 H2AFB2P0C5Z0 115 aa13.87□□□□□ -0.19
CDC42BPB-204ENST00000559043 PGA4P0DJD7 388 aa13.87□□□□□ -0.19
CDC42BPB-204ENST00000559043 PGA3P0DJD8 388 aa13.87□□□□□ -0.19
CDC42BPB-204ENST00000559043 CD37P11049 281 aa13.87□□□□□ -0.19
CDC42BPB-204ENST00000559043 ZNF823P16415 610 aa13.87□□□□□ -0.19
CDC42BPB-204ENST00000559043 CASP6P55212 293 aa13.87□□□□□ -0.19
CDC42BPB-204ENST00000559043 TAS2R20P59543 309 aa13.87□□□□□ -0.19
CDC42BPB-204ENST00000559043 ADORA2A-AS1P86434 159 aa13.87□□□□□ -0.19
CDC42BPB-204ENST00000559043 FMODQ06828 376 aa13.87□□□□□ -0.19
CDC42BPB-204ENST00000559043 GSG1Q2KHT4 349 aa13.87□□□□□ -0.19
CDC42BPB-204ENST00000559043 Q5BKY6 102 aa13.87□□□□□ -0.19
CDC42BPB-204ENST00000559043 RIPPLY2Q5TAB7 128 aa13.87□□□□□ -0.19
CDC42BPB-204ENST00000559043 LRFN4Q6PJG9 635 aa13.87□□□□□ -0.19
CDC42BPB-204ENST00000559043 DEGS2Q6QHC5 323 aa13.87□□□□□ -0.19
CDC42BPB-204ENST00000559043 OR56B4Q8NH76 319 aa13.87□□□□□ -0.19
CDC42BPB-204ENST00000559043 ASB5Q8WWX0 329 aa13.87□□□□□ -0.19
CDC42BPB-204ENST00000559043 GCDHQ92947 438 aaPredicted RBP13.87□□□□□ -0.19
CDC42BPB-204ENST00000559043 PPP1R14AQ96A00 147 aa13.87□□□□□ -0.19
CDC42BPB-204ENST00000559043 MED28Q9H204 178 aa13.87□□□□□ -0.19
CDC42BPB-204ENST00000559043 SLA2Q9H6Q3 261 aa13.87□□□□□ -0.19
CDC42BPB-204ENST00000559043 EMC3Q9P0I2 261 aa13.87□□□□□ -0.19
CDC42BPB-204ENST00000559043 PRSS50Q9UI38 385 aa13.87□□□□□ -0.19
CDC42BPB-204ENST00000559043 FOXD3Q9UJU5 478 aaPredicted RBP13.87□□□□□ -0.19
CDC42BPB-204ENST00000559043 RCE1Q9Y256 329 aa13.87□□□□□ -0.19
CDC42BPB-204ENST00000559043 R4GMQ9 66 aa13.87□□□□□ -0.19
CDC42BPB-204ENST00000559043 ANKRD20A5PA0PJZ0 165 aa13.87□□□□□ -0.19
CDC42BPB-204ENST00000559043 MRPL33O75394 65 aaKnown RBP13.87□□□□□ -0.19
CDC42BPB-204ENST00000559043 ISG15P05161 165 aa13.87□□□□□ -0.19
CDC42BPB-204ENST00000559043 FOXG1P55316 489 aaPredicted RBP13.87□□□□□ -0.19
CDC42BPB-204ENST00000559043 FCN2Q15485 313 aa13.87□□□□□ -0.19
CDC42BPB-204ENST00000559043 HIST3H3Q16695 136 aa13.87□□□□□ -0.19
CDC42BPB-204ENST00000559043 ELFN2Q5R3F8 820 aa13.87□□□□□ -0.19
CDC42BPB-204ENST00000559043 TSPO2Q5TGU0 170 aa13.87□□□□□ -0.19
CDC42BPB-204ENST00000559043 CD276Q5ZPR3 534 aa13.87□□□□□ -0.19
CDC42BPB-204ENST00000559043 FAM166AQ6J272 317 aa13.87□□□□□ -0.19
CDC42BPB-204ENST00000559043 SLC7A5P1Q8MH63 180 aa13.87□□□□□ -0.19
CDC42BPB-204ENST00000559043 SLC7A10Q9NS82 523 aa13.87□□□□□ -0.19
CDC42BPB-204ENST00000559043 DHDHQ9UQ10 334 aa13.87□□□□□ -0.19
CDC42BPB-204ENST00000559043 ZNF726A6NNF4 738 aa13.86□□□□□ -0.19
CDC42BPB-204ENST00000559043 H3BSH0 61 aa13.86□□□□□ -0.19
CDC42BPB-204ENST00000559043 SLC17A2O00624 439 aa13.86□□□□□ -0.19
CDC42BPB-204ENST00000559043 XRCC3O43542 346 aa13.86□□□□□ -0.19
CDC42BPB-204ENST00000559043 GMDSO60547 372 aa13.86□□□□□ -0.19
CDC42BPB-204ENST00000559043 ITGA5P08648 1049 aa13.86□□□□□ -0.19
CDC42BPB-204ENST00000559043 FSTP19883 344 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms