RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 ZNF20P17024 532 aa14.57□□□□□ -0.08
SNX1-203ENST00000558040 ANOS1P23352 680 aa14.57□□□□□ -0.08
SNX1-203ENST00000558040 PTAFRP25105 342 aa14.57□□□□□ -0.08
SNX1-203ENST00000558040 UCP2P55851 309 aa14.57□□□□□ -0.08
SNX1-203ENST00000558040 HSD17B12Q53GQ0 312 aa14.57□□□□□ -0.08
SNX1-203ENST00000558040 SEZ6L2Q6UXD5 910 aa14.57□□□□□ -0.08
SNX1-203ENST00000558040 RFPL4BQ6ZWI9 263 aa14.57□□□□□ -0.08
SNX1-203ENST00000558040 MRPL21Q7Z2W9 205 aaKnown RBP14.57□□□□□ -0.08
SNX1-203ENST00000558040 ZNF101Q8IZC7 436 aa14.57□□□□□ -0.08
SNX1-203ENST00000558040 OR2AE1Q8NHA4 323 aa14.57□□□□□ -0.08
SNX1-203ENST00000558040 LYZL4Q96KX0 146 aa14.57□□□□□ -0.08
SNX1-203ENST00000558040 BCL2L14Q9BZR8 327 aa14.57□□□□□ -0.08
SNX1-203ENST00000558040 SLITRK2Q9H156 845 aa14.57□□□□□ -0.08
SNX1-203ENST00000558040 NOX4Q9NPH5 578 aa14.57□□□□□ -0.08
SNX1-203ENST00000558040 ZNF275Q9NSD4 429 aaPredicted RBP14.57□□□□□ -0.08
SNX1-203ENST00000558040 CKLFQ9UBR5 152 aa14.57□□□□□ -0.08
SNX1-203ENST00000558040 TRBV5-7A0A0A0MS05 114 aa14.56□□□□□ -0.08
SNX1-203ENST00000558040 TUBAL3A6NHL2 446 aa14.56□□□□□ -0.08
SNX1-203ENST00000558040 NGFP01138 241 aa14.56□□□□□ -0.08
SNX1-203ENST00000558040 FAM157BP0CG42 384 aa14.56□□□□□ -0.08
SNX1-203ENST00000558040 EPXP11678 715 aa14.56□□□□□ -0.08
SNX1-203ENST00000558040 CD40P25942 277 aa14.56□□□□□ -0.08
SNX1-203ENST00000558040 CALRP27797 417 aaKnown RBP14.56□□□□□ -0.08
SNX1-203ENST00000558040 PPP1CBP62140 327 aa14.56□□□□□ -0.08
SNX1-203ENST00000558040 ZNF92Q03936 586 aa14.56□□□□□ -0.08
SNX1-203ENST00000558040 Q6ZSR3 168 aa14.56□□□□□ -0.08
SNX1-203ENST00000558040 C22orf34Q6ZV56 151 aa14.56□□□□□ -0.08
SNX1-203ENST00000558040 C10orf35Q96D05 121 aa14.56□□□□□ -0.08
SNX1-203ENST00000558040 OR51B6Q9H340 312 aa14.56□□□□□ -0.08
SNX1-203ENST00000558040 PTTG3PQ9NZH4 202 aa14.56□□□□□ -0.08
SNX1-203ENST00000558040 STARD10Q9Y365 291 aa14.56□□□□□ -0.08
SNX1-203ENST00000558040 V9GYS6 101 aa14.56□□□□□ -0.08
SNX1-203ENST00000558040 NBASA2RRP1 2371 aa14.56□□□□□ -0.08
SNX1-203ENST00000558040 PCNX1Q96RV3 2341 aa14.55□□□□□ -0.08
SNX1-203ENST00000558040 hCG_38984A0A1B0GV85 526 aa14.55□□□□□ -0.08
SNX1-203ENST00000558040 GRNP28799 593 aaKnown RBP14.55□□□□□ -0.08
SNX1-203ENST00000558040 CALCRP30988 508 aa14.55□□□□□ -0.08
SNX1-203ENST00000558040 MAP2K3P46734 347 aa14.55□□□□□ -0.08
SNX1-203ENST00000558040 SERPINB10P48595 397 aa14.55□□□□□ -0.08
SNX1-203ENST00000558040 MTNR1BP49286 362 aa14.55□□□□□ -0.08
SNX1-203ENST00000558040 PGAP1Q75T13 922 aa14.55□□□□□ -0.08
SNX1-203ENST00000558040 SERPINA12Q8IW75 414 aa14.55□□□□□ -0.08
SNX1-203ENST00000558040 SEMA6DQ8NFY4 1073 aa14.55□□□□□ -0.08
SNX1-203ENST00000558040 OR1J1Q8NGS3 322 aa14.55□□□□□ -0.08
SNX1-203ENST00000558040 OR14K1Q8NGZ2 314 aa14.55□□□□□ -0.08
SNX1-203ENST00000558040 NDNFQ8TB73 568 aa14.55□□□□□ -0.08
SNX1-203ENST00000558040 DACH2Q96NX9 599 aa14.55□□□□□ -0.08
SNX1-203ENST00000558040 DCSTAMPQ9H295 470 aa14.55□□□□□ -0.08
SNX1-203ENST00000558040 ESRP2Q9H6T0 727 aaKnown RBP14.55□□□□□ -0.08
SNX1-203ENST00000558040 RNF167Q9H6Y7 350 aa14.55□□□□□ -0.08
SNX1-203ENST00000558040 TCF7L1Q9HCS4 588 aa14.55□□□□□ -0.08
SNX1-203ENST00000558040 TRAV1-2A0A0B4J238 106 aa14.54□□□□□ -0.08
SNX1-203ENST00000558040 A0A1W2PPK0 400 aa14.54□□□□□ -0.08
SNX1-203ENST00000558040 CASKO14936 926 aa14.54□□□□□ -0.08
SNX1-203ENST00000558040 IL1AP01583 271 aa14.54□□□□□ -0.08
SNX1-203ENST00000558040 FSTP19883 344 aa14.54□□□□□ -0.08
SNX1-203ENST00000558040 GNALP38405 381 aa14.54□□□□□ -0.08
SNX1-203ENST00000558040 MAGEB1P43366 347 aa14.54□□□□□ -0.08
SNX1-203ENST00000558040 GSK3AP49840 483 aa14.54□□□□□ -0.08
SNX1-203ENST00000558040 RPS23P62266 143 aaKnown RBP14.54□□□□□ -0.08
SNX1-203ENST00000558040 FAM3AP98173 230 aa14.54□□□□□ -0.08
SNX1-203ENST00000558040 RIPPLY1Q0D2K3 151 aa14.54□□□□□ -0.08
SNX1-203ENST00000558040 GK2Q14410 553 aaPredicted RBP14.54□□□□□ -0.08
SNX1-203ENST00000558040 SPCS2Q15005 226 aa14.54□□□□□ -0.08
SNX1-203ENST00000558040 OR8B8Q15620 311 aa14.54□□□□□ -0.08
SNX1-203ENST00000558040 FAM27D1Q5T7N8 215 aa14.54□□□□□ -0.08
SNX1-203ENST00000558040 FBXW12Q6X9E4 464 aa14.54□□□□□ -0.08
SNX1-203ENST00000558040 TPRA1Q86W33 373 aa14.54□□□□□ -0.08
SNX1-203ENST00000558040 PARP16Q8N5Y8 322 aa14.54□□□□□ -0.08
SNX1-203ENST00000558040 LINC01560Q8TB33 94 aa14.54□□□□□ -0.08
SNX1-203ENST00000558040 FGGYQ96C11 551 aa14.54□□□□□ -0.08
SNX1-203ENST00000558040 REPIN1Q9BWE0 567 aaKnown RBP14.54□□□□□ -0.08
SNX1-203ENST00000558040 SNTG1Q9NSN8 517 aa14.54□□□□□ -0.08
SNX1-203ENST00000558040 FOXJ3Q9UPW0 622 aa14.54□□□□□ -0.08
SNX1-203ENST00000558040 PIGLQ9Y2B2 252 aa14.54□□□□□ -0.08
SNX1-203ENST00000558040 KMT2BQ9UMN6 2715 aaPredicted RBP14.54□□□□□ -0.08
SNX1-203ENST00000558040 GGT3PA6NGU5 568 aa14.53□□□□□ -0.08
SNX1-203ENST00000558040 TRIM64BA6NI03 449 aa14.53□□□□□ -0.08
SNX1-203ENST00000558040 PDCD5O14737 125 aa14.53□□□□□ -0.08
SNX1-203ENST00000558040 PIN1P1O15428 100 aa14.53□□□□□ -0.08
SNX1-203ENST00000558040 CDRT1O95170 752 aa14.53□□□□□ -0.08
SNX1-203ENST00000558040 SELEP16581 610 aa14.53□□□□□ -0.08
SNX1-203ENST00000558040 SRMP19623 302 aa14.53□□□□□ -0.08
SNX1-203ENST00000558040 SDC2P34741 201 aa14.53□□□□□ -0.08
SNX1-203ENST00000558040 THBS4P35443 961 aa14.53□□□□□ -0.08
SNX1-203ENST00000558040 TGFBR1P36897 503 aa14.53□□□□□ -0.08
SNX1-203ENST00000558040 DDOSTP39656 456 aa14.53□□□□□ -0.08
SNX1-203ENST00000558040 PPP3R1P63098 170 aa14.53□□□□□ -0.08
SNX1-203ENST00000558040 SNTB2Q13425 540 aaKnown RBP14.53□□□□□ -0.08
SNX1-203ENST00000558040 ZBTB37Q5TC79 503 aa14.53□□□□□ -0.08
SNX1-203ENST00000558040 FTMTQ8N4E7 242 aa14.53□□□□□ -0.08
SNX1-203ENST00000558040 CSNK2A3Q8NEV1 391 aa14.53□□□□□ -0.08
SNX1-203ENST00000558040 OR5D14Q8NGL3 314 aa14.53□□□□□ -0.08
SNX1-203ENST00000558040 SLC25A40Q8TBP6 338 aa14.53□□□□□ -0.08
SNX1-203ENST00000558040 PP6455Q8WZ26 134 aa14.53□□□□□ -0.08
SNX1-203ENST00000558040 RADILQ96JH8 1075 aa14.53□□□□□ -0.08
SNX1-203ENST00000558040 SOX7Q9BT81 388 aa14.53□□□□□ -0.08
SNX1-203ENST00000558040 PPIL3Q9H2H8 161 aaKnown RBP14.53□□□□□ -0.08
SNX1-203ENST00000558040 NPDC1Q9NQX5 325 aaPredicted RBP14.53□□□□□ -0.08
SNX1-203ENST00000558040 DIDO1Q9BTC0 2240 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms