RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 TMEM9Q9P0T7 183 aa2.29□□□□□ -2.04
TRAV28-201ENST00000557548 NEUROG3Q9Y4Z2 214 aa2.29□□□□□ -2.04
TRAV28-201ENST00000557548 LRRC42Q9Y546 428 aa2.29□□□□□ -2.04
TRAV28-201ENST00000557548 STRCQ7RTU9 1775 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 RICTORQ6R327 1708 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 CFAP43Q8NDM7 1665 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 FRMPD1Q5SYB0 1578 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 HECW2Q9P2P5 1572 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 ERICH3Q5RHP9 1530 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 TRAV39A0A0B4J263 110 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 CIB4A0PJX0 185 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 GOLGA6L10A6NI86 522 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 TMEM114B3SHH9 223 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 F8VP50 259 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 H0YJX3 145 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 PGRMC1O00264 195 aaKnown RBP2.28□□□□□ -2.04
TRAV28-201ENST00000557548 GABRPO00591 440 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 NME4O00746 187 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 TNFSF11O14788 317 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 CIAO1O76071 339 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 SUPT7LO94864 414 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 DEXIO95424 95 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 C6orf47O95873 294 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 CATP04040 527 aaKnown RBP2.28□□□□□ -2.04
TRAV28-201ENST00000557548 CD3GP09693 182 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 RD3LP0DJH9 198 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 PSKH1P11801 424 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 PRPS1L1P21108 318 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 TEAD1P28347 426 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 HSD11B1P28845 292 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 MAS1LP35410 378 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 KIR3DL2P43630 455 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 CSNK1A1P48729 337 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 NCBP2P52298 156 aaKnown RBP eCLIP2.28□□□□□ -2.04
TRAV28-201ENST00000557548 ACTBP60709 375 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 ACTG1P63261 375 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 TSPAN31Q12999 210 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 SLC39A6Q13433 755 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 OR4D1Q15615 310 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 ALX1Q15699 326 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 SLC1A5Q15758 541 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 TNXAQ16473 311 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 EXOC3L4Q17RC7 722 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 TPRG1LQ5T0D9 272 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 CASC10Q5T4H9 136 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 CCNJQ5T5M9 372 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 FHL5Q5TD97 284 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 RNF165Q6ZSG1 346 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 LINC00173Q6ZV60 143 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 SETD3Q86TU7 594 aaPredicted RBP2.28□□□□□ -2.04
TRAV28-201ENST00000557548 OAFQ86UD1 273 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 GTSCR1Q86UQ5 136 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 BOD1L2Q8IYS8 172 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 ARRDC1Q8N5I2 433 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 TBC1D19Q8N5T2 526 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 C14orf178Q8N769 122 aaPredicted RBP2.28□□□□□ -2.04
TRAV28-201ENST00000557548 OR2L8Q8NGY9 312 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 OR2G3Q8NGZ4 309 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 ITFG1Q8TB96 612 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 OR51E1Q8TCB6 317 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 FAM222BQ8WU58 562 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 PHF10Q8WUB8 498 aaKnown RBP2.28□□□□□ -2.04
TRAV28-201ENST00000557548 RNF133Q8WVZ7 376 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 APH1BQ8WW43 257 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 BAALCQ8WXS3 180 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 RPEQ96AT9 228 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 S100PBPQ96BU1 408 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 TAAR1Q96RJ0 339 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 RASL11BQ9BPW5 248 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 UBXN6Q9BZV1 441 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 OR11A1Q9GZK7 315 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 OR51B6Q9H340 312 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 C1orf198Q9H425 327 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 CLMPQ9H6B4 373 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 ZNF107Q9UII5 783 aaPredicted RBP2.28□□□□□ -2.04
TRAV28-201ENST00000557548 NXT1Q9UKK6 140 aaKnown RBP2.28□□□□□ -2.04
TRAV28-201ENST00000557548 TIMM22Q9Y584 194 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 TSSC4Q9Y5U2 329 aaPredicted RBP2.28□□□□□ -2.04
TRAV28-201ENST00000557548 MRPS18BQ9Y676 258 aaKnown RBP2.28□□□□□ -2.04
TRAV28-201ENST00000557548 V9GYY9 64 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 CHD4Q14839 1912 aa2.28□□□□□ -2.04
TRAV28-201ENST00000557548 ADAMTSL3P82987 1691 aa2.28□□□□□ -2.05
TRAV28-201ENST00000557548 CACNA1FO60840 1977 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 CEMIPQ8WUJ3 1361 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 RAB3GAP2Q9H2M9 1393 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 MAPK8IP3Q9UPT6 1336 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 A0A0G2JN53 185 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 FAM168BA1KXE4 195 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 EPOPA6NHQ4 379 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 KRTAP4-16G5E9R7 235 aaPredicted RBP2.27□□□□□ -2.05
TRAV28-201ENST00000557548 H3BNH8 94 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 SLC31A2O15432 143 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 B4GALT5O43286 388 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 BCL2L11O43521 198 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 SC5DO75845 299 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 MMP23AO75900 390 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 TNFAIP8O95379 198 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 PLEKHA8P1O95397 391 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 BRI3O95415 125 aa2.27□□□□□ -2.05
TRAV28-201ENST00000557548 PSMG1O95456 288 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms