RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 LMX1AQ8TE12 382 aa10.11□□□□□ -0.79
SRP54-213ENST00000556994 RNF133Q8WVZ7 376 aa10.11□□□□□ -0.79
SRP54-213ENST00000556994 MAFIPQ8WZ33 124 aa10.11□□□□□ -0.79
SRP54-213ENST00000556994 KLHDC7BQ96G42 594 aa10.11□□□□□ -0.79
SRP54-213ENST00000556994 KCNK17Q96T54 332 aa10.11□□□□□ -0.79
SRP54-213ENST00000556994 USB1Q9BQ65 265 aaKnown RBP10.11□□□□□ -0.79
SRP54-213ENST00000556994 LPAR5Q9H1C0 372 aa10.11□□□□□ -0.79
SRP54-213ENST00000556994 GSKIPQ9P0R6 139 aa10.11□□□□□ -0.79
SRP54-213ENST00000556994 TRBV6-7A0A0A0MS04 114 aa10.11□□□□□ -0.79
SRP54-213ENST00000556994 ARPC4-TTLL3A0A0A6YYG9 625 aa10.11□□□□□ -0.79
SRP54-213ENST00000556994 A0A1W2PQD3 144 aa10.11□□□□□ -0.79
SRP54-213ENST00000556994 MTRF1O75570 445 aaKnown RBP10.11□□□□□ -0.79
SRP54-213ENST00000556994 SNAPINO95295 136 aa10.11□□□□□ -0.79
SRP54-213ENST00000556994 MUC1P15941 1255 aaPredicted RBP10.11□□□□□ -0.79
SRP54-213ENST00000556994 RFC3P40938 356 aa10.11□□□□□ -0.79
SRP54-213ENST00000556994 OR3A4PP47883 348 aa10.11□□□□□ -0.79
SRP54-213ENST00000556994 CX3CR1P49238 355 aa10.11□□□□□ -0.79
SRP54-213ENST00000556994 MMP16P51512 607 aa10.11□□□□□ -0.79
SRP54-213ENST00000556994 TMEM50BP56557 158 aa10.11□□□□□ -0.79
SRP54-213ENST00000556994 DCDP81605 110 aaKnown RBP10.11□□□□□ -0.79
SRP54-213ENST00000556994 HYAL1Q12794 435 aa10.11□□□□□ -0.79
SRP54-213ENST00000556994 PDZK1IP1Q13113 114 aa10.11□□□□□ -0.79
SRP54-213ENST00000556994 RAB32Q13637 225 aa10.11□□□□□ -0.79
SRP54-213ENST00000556994 ANKRD55Q3KP44 614 aa10.11□□□□□ -0.79
SRP54-213ENST00000556994 C10orf91Q5T1B1 145 aa10.11□□□□□ -0.79
SRP54-213ENST00000556994 DRAM2Q6UX65 266 aa10.11□□□□□ -0.79
SRP54-213ENST00000556994 PGAP1Q75T13 922 aa10.11□□□□□ -0.79
SRP54-213ENST00000556994 OIT3Q8WWZ8 545 aa10.11□□□□□ -0.79
SRP54-213ENST00000556994 C5orf34Q96MH7 638 aa10.11□□□□□ -0.79
SRP54-213ENST00000556994 ST6GALNAC5Q9BVH7 336 aa10.11□□□□□ -0.79
SRP54-213ENST00000556994 SLC7A5P2Q9GIP4 190 aa10.11□□□□□ -0.79
SRP54-213ENST00000556994 METTL8Q9H825 291 aaKnown RBP10.11□□□□□ -0.79
SRP54-213ENST00000556994 MMP26Q9NRE1 261 aa10.11□□□□□ -0.79
SRP54-213ENST00000556994 GPR132Q9UNW8 380 aa10.11□□□□□ -0.79
SRP54-213ENST00000556994 CARHSP1Q9Y2V2 147 aaKnown RBP10.11□□□□□ -0.79
SRP54-213ENST00000556994 TMEM14DPA8MWL7 114 aa10.1□□□□□ -0.79
SRP54-213ENST00000556994 HOXB5P09067 269 aa10.1□□□□□ -0.79
SRP54-213ENST00000556994 RCC1P18754 421 aaPredicted RBP10.1□□□□□ -0.79
SRP54-213ENST00000556994 GLRA1P23415 457 aa10.1□□□□□ -0.79
SRP54-213ENST00000556994 ID4P47928 161 aa10.1□□□□□ -0.79
SRP54-213ENST00000556994 BIDP55957 195 aa10.1□□□□□ -0.79
SRP54-213ENST00000556994 SUPT4H1P63272 117 aaKnown RBP10.1□□□□□ -0.79
SRP54-213ENST00000556994 MRPS21P82921 87 aaKnown RBP10.1□□□□□ -0.79
SRP54-213ENST00000556994 FOXK1P85037 733 aa10.1□□□□□ -0.79
SRP54-213ENST00000556994 HSF1Q00613 529 aa10.1□□□□□ -0.79
SRP54-213ENST00000556994 TLE3Q04726 772 aa10.1□□□□□ -0.79
SRP54-213ENST00000556994 PJVKQ0ZLH3 352 aa10.1□□□□□ -0.79
SRP54-213ENST00000556994 TDGQ13569 410 aa10.1□□□□□ -0.79
SRP54-213ENST00000556994 RBM39Q14498 530 aaKnown RBP10.1□□□□□ -0.79
SRP54-213ENST00000556994 PCK2Q16822 640 aa10.1□□□□□ -0.79
SRP54-213ENST00000556994 KIAA0895LQ68EN5 471 aa10.1□□□□□ -0.79
SRP54-213ENST00000556994 SLC29A4Q7RTT9 530 aa10.1□□□□□ -0.79
SRP54-213ENST00000556994 OR10H5Q8NGA6 315 aa10.1□□□□□ -0.79
SRP54-213ENST00000556994 NUBPLQ8TB37 319 aa10.1□□□□□ -0.79
SRP54-213ENST00000556994 RAB3CQ96E17 227 aa10.1□□□□□ -0.79
SRP54-213ENST00000556994 SEC61A2Q9H9S3 476 aa10.1□□□□□ -0.79
SRP54-213ENST00000556994 RHOFQ9HBH0 211 aa10.1□□□□□ -0.79
SRP54-213ENST00000556994 ACKR4Q9NPB9 350 aa10.1□□□□□ -0.79
SRP54-213ENST00000556994 COA4Q9NYJ1 87 aa10.1□□□□□ -0.79
SRP54-213ENST00000556994 COPS7AQ9UBW8 275 aa10.1□□□□□ -0.79
SRP54-213ENST00000556994 CTSFQ9UBX1 484 aa10.1□□□□□ -0.79
SRP54-213ENST00000556994 MRPS28Q9Y2Q9 187 aaKnown RBP10.1□□□□□ -0.79
SRP54-213ENST00000556994 MMACHCQ9Y4U1 282 aa10.1□□□□□ -0.79
SRP54-213ENST00000556994 FLVCR1Q9Y5Y0 555 aa10.1□□□□□ -0.79
SRP54-213ENST00000556994 UNC13CQ8NB66 2214 aa10.1□□□□□ -0.79
SRP54-213ENST00000556994 CEP290O15078 2479 aa10.1□□□□□ -0.79
SRP54-213ENST00000556994 MEX3AA1L020 520 aaKnown RBP10.1□□□□□ -0.79
SRP54-213ENST00000556994 SERPINA5P05154 406 aa10.1□□□□□ -0.79
SRP54-213ENST00000556994 ZNF20P17024 532 aa10.1□□□□□ -0.79
SRP54-213ENST00000556994 DRD1P21728 446 aa10.1□□□□□ -0.79
SRP54-213ENST00000556994 CDAP32320 146 aa10.1□□□□□ -0.79
SRP54-213ENST00000556994 BLKP51451 505 aa10.1□□□□□ -0.79
SRP54-213ENST00000556994 S100A10P60903 97 aa10.1□□□□□ -0.79
SRP54-213ENST00000556994 DCAF7P61962 342 aa10.1□□□□□ -0.79
SRP54-213ENST00000556994 CYCSP99999 105 aaKnown RBP10.1□□□□□ -0.79
SRP54-213ENST00000556994 DEFB133Q30KQ1 61 aa10.1□□□□□ -0.79
SRP54-213ENST00000556994 DNM1P34Q6PK57 102 aa10.1□□□□□ -0.79
SRP54-213ENST00000556994 ETV3LQ6ZN32 361 aa10.1□□□□□ -0.79
SRP54-213ENST00000556994 H1FNTQ75WM6 255 aaPredicted RBP10.1□□□□□ -0.79
SRP54-213ENST00000556994 ARHGAP5-AS1Q96IT6 56 aa10.1□□□□□ -0.79
SRP54-213ENST00000556994 FAM71F1Q96KD3 344 aaPredicted RBP10.1□□□□□ -0.79
SRP54-213ENST00000556994 UQCC2Q9BRT2 126 aa10.1□□□□□ -0.79
SRP54-213ENST00000556994 RTBDNQ9BSG5 229 aaPredicted RBP10.1□□□□□ -0.79
SRP54-213ENST00000556994 SEC11CQ9BY50 192 aa10.1□□□□□ -0.79
SRP54-213ENST00000556994 ZFP57Q9NU63 452 aa10.1□□□□□ -0.79
SRP54-213ENST00000556994 WBP1LQ9NX94 342 aa10.1□□□□□ -0.79
SRP54-213ENST00000556994 LPAR3Q9UBY5 353 aa10.1□□□□□ -0.79
SRP54-213ENST00000556994 CD207Q9UJ71 328 aa10.1□□□□□ -0.79
SRP54-213ENST00000556994 A6NIZ1 184 aa10.09□□□□□ -0.79
SRP54-213ENST00000556994 MBTPS2O43462 519 aa10.09□□□□□ -0.79
SRP54-213ENST00000556994 LRP3O75074 770 aa10.09□□□□□ -0.79
SRP54-213ENST00000556994 CRTAPO75718 401 aaPredicted RBP10.09□□□□□ -0.79
SRP54-213ENST00000556994 SFT2D2O95562 160 aa10.09□□□□□ -0.79
SRP54-213ENST00000556994 NME2P22392 152 aa10.09□□□□□ -0.79
SRP54-213ENST00000556994 AKR1C3P42330 323 aa10.09□□□□□ -0.79
SRP54-213ENST00000556994 DAP3P51398 398 aaKnown RBP10.09□□□□□ -0.79
SRP54-213ENST00000556994 FBXW4P57775 412 aa10.09□□□□□ -0.79
SRP54-213ENST00000556994 TAS2R31P59538 309 aa10.09□□□□□ -0.79
SRP54-213ENST00000556994 RAP1BP61224 184 aa10.09□□□□□ -0.79
SRP54-213ENST00000556994 RAP1AP62834 184 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms