RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 IGLV3-12A0A075B6K2 115 aa6.21□□□□□ -1.42
TDP1-213ENST00000555880 IGKV1D-43A0A0B4J1Z2 117 aa6.21□□□□□ -1.42
TDP1-213ENST00000555880 C5orf51A6NDU8 294 aa6.21□□□□□ -1.42
TDP1-213ENST00000555880 F5H0A9 414 aaPredicted RBP6.21□□□□□ -1.42
TDP1-213ENST00000555880 LGALS8O00214 317 aa6.21□□□□□ -1.42
TDP1-213ENST00000555880 ADAM10O14672 748 aa6.21□□□□□ -1.42
TDP1-213ENST00000555880 BCAT2O15382 392 aaPredicted RBP6.21□□□□□ -1.42
TDP1-213ENST00000555880 APOC3P02656 99 aa6.21□□□□□ -1.42
TDP1-213ENST00000555880 HCKP08631 526 aa6.21□□□□□ -1.42
TDP1-213ENST00000555880 GSTP1P09211 210 aaKnown RBP6.21□□□□□ -1.42
TDP1-213ENST00000555880 NR2C1P13056 603 aa6.21□□□□□ -1.42
TDP1-213ENST00000555880 GNB3P16520 340 aa6.21□□□□□ -1.42
TDP1-213ENST00000555880 CNR1P21554 472 aa6.21□□□□□ -1.42
TDP1-213ENST00000555880 ATP1B3P54709 279 aa6.21□□□□□ -1.42
TDP1-213ENST00000555880 STARD6P59095 220 aa6.21□□□□□ -1.42
TDP1-213ENST00000555880 GABREP78334 506 aa6.21□□□□□ -1.42
TDP1-213ENST00000555880 QRFPP83859 136 aa6.21□□□□□ -1.42
TDP1-213ENST00000555880 SLC25A53Q5H9E4 307 aa6.21□□□□□ -1.42
TDP1-213ENST00000555880 RHOUQ7L0Q8 258 aa6.21□□□□□ -1.42
TDP1-213ENST00000555880 ABHD12BQ7Z5M8 362 aaPredicted RBP6.21□□□□□ -1.42
TDP1-213ENST00000555880 PAQR4Q8N4S7 273 aaPredicted RBP6.21□□□□□ -1.42
TDP1-213ENST00000555880 GVQW1Q8N7I0 195 aa6.21□□□□□ -1.42
TDP1-213ENST00000555880 PNLDC1Q8NA58 520 aaKnown RBP6.21□□□□□ -1.42
TDP1-213ENST00000555880 RELL2Q8NC24 303 aaPredicted RBP6.21□□□□□ -1.42
TDP1-213ENST00000555880 NFAM1Q8NET5 270 aaPredicted RBP6.21□□□□□ -1.42
TDP1-213ENST00000555880 SLC22A8Q8TCC7 542 aa6.21□□□□□ -1.42
TDP1-213ENST00000555880 RAB3CQ96E17 227 aa6.21□□□□□ -1.42
TDP1-213ENST00000555880 TMEM41AQ96HV5 264 aa6.21□□□□□ -1.42
TDP1-213ENST00000555880 SEC22AQ96IW7 307 aa6.21□□□□□ -1.42
TDP1-213ENST00000555880 SCGB3A2Q96PL1 93 aa6.21□□□□□ -1.42
TDP1-213ENST00000555880 GPER1Q99527 375 aa6.21□□□□□ -1.42
TDP1-213ENST00000555880 CDX2Q99626 313 aaPredicted RBP6.21□□□□□ -1.42
TDP1-213ENST00000555880 CDC6Q99741 560 aa6.21□□□□□ -1.42
TDP1-213ENST00000555880 NPAS1Q99742 590 aa6.21□□□□□ -1.42
TDP1-213ENST00000555880 ARPC5LQ9BPX5 153 aa6.21□□□□□ -1.42
TDP1-213ENST00000555880 MRPL13Q9BYD1 178 aaKnown RBP6.21□□□□□ -1.42
TDP1-213ENST00000555880 LDAHQ9H6V9 325 aa6.21□□□□□ -1.42
TDP1-213ENST00000555880 GAREM1Q9H706 876 aa6.21□□□□□ -1.42
TDP1-213ENST00000555880 C19orf25Q9UFG5 118 aaPredicted RBP6.21□□□□□ -1.42
TDP1-213ENST00000555880 GPR160Q9UJ42 338 aa6.21□□□□□ -1.42
TDP1-213ENST00000555880 ATXN7L1Q9ULK2 861 aaPredicted RBP6.21□□□□□ -1.42
TDP1-213ENST00000555880 RHBDD3Q9Y3P4 386 aa6.21□□□□□ -1.42
TDP1-213ENST00000555880 WIF1Q9Y5W5 379 aa6.21□□□□□ -1.42
TDP1-213ENST00000555880 CABIN1Q9Y6J0 2220 aa6.21□□□□□ -1.42
TDP1-213ENST00000555880 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.2□□□□□ -1.42
TDP1-213ENST00000555880 C13orf42A0A1B0GVH6 325 aa6.2□□□□□ -1.42
TDP1-213ENST00000555880 ZNF726A6NNF4 738 aa6.2□□□□□ -1.42
TDP1-213ENST00000555880 TMEM14DPA8MWL7 114 aa6.2□□□□□ -1.42
TDP1-213ENST00000555880 SHISA8B8ZZ34 492 aa6.2□□□□□ -1.42
TDP1-213ENST00000555880 EEF1E1-BLOC1S5C9J1V9 151 aa6.2□□□□□ -1.42
TDP1-213ENST00000555880 ETV2O00321 342 aaPredicted RBP6.2□□□□□ -1.42
TDP1-213ENST00000555880 TLX3O43711 291 aaPredicted RBP6.2□□□□□ -1.42
TDP1-213ENST00000555880 SCRG1O75711 98 aa6.2□□□□□ -1.42
TDP1-213ENST00000555880 ZFAND5O76080 213 aa6.2□□□□□ -1.42
TDP1-213ENST00000555880 MPIG6BO95866 241 aa6.2□□□□□ -1.42
TDP1-213ENST00000555880 WDPCPO95876 746 aa6.2□□□□□ -1.42
TDP1-213ENST00000555880 PMP2P02689 132 aa6.2□□□□□ -1.42
TDP1-213ENST00000555880 FKBP2P26885 142 aaKnown RBP6.2□□□□□ -1.42
TDP1-213ENST00000555880 GUCA1AP43080 201 aaPredicted RBP6.2□□□□□ -1.42
TDP1-213ENST00000555880 CBX5P45973 191 aa6.2□□□□□ -1.42
TDP1-213ENST00000555880 CX3CR1P49238 355 aa6.2□□□□□ -1.42
TDP1-213ENST00000555880 GRB2P62993 217 aaKnown RBP6.2□□□□□ -1.42
TDP1-213ENST00000555880 DCDP81605 110 aaKnown RBP6.2□□□□□ -1.42
TDP1-213ENST00000555880 SNTB1Q13884 538 aaKnown RBP6.2□□□□□ -1.42
TDP1-213ENST00000555880 PNLIPRP3Q17RR3 467 aa6.2□□□□□ -1.42
TDP1-213ENST00000555880 PLPPR5Q32ZL2 321 aa6.2□□□□□ -1.42
TDP1-213ENST00000555880 PAN3Q58A45 887 aaKnown RBP6.2□□□□□ -1.42
TDP1-213ENST00000555880 FAM74A1Q5RGS3 127 aa6.2□□□□□ -1.42
TDP1-213ENST00000555880 FAM69BQ5VUD6 431 aa6.2□□□□□ -1.42
TDP1-213ENST00000555880 ELP2Q6IA86 826 aa6.2□□□□□ -1.42
TDP1-213ENST00000555880 ZNF529Q6P280 563 aa6.2□□□□□ -1.42
TDP1-213ENST00000555880 GLIPR1L1Q6UWM5 242 aa6.2□□□□□ -1.42
TDP1-213ENST00000555880 TFAP2EQ6VUC0 442 aa6.2□□□□□ -1.42
TDP1-213ENST00000555880 CFAP77Q6ZQR2 320 aa6.2□□□□□ -1.42
TDP1-213ENST00000555880 MOB3CQ70IA8 216 aa6.2□□□□□ -1.42
TDP1-213ENST00000555880 ARMC10Q8N2F6 343 aa6.2□□□□□ -1.42
TDP1-213ENST00000555880 SLC25A45Q8N413 288 aa6.2□□□□□ -1.42
TDP1-213ENST00000555880 ARRDC1Q8N5I2 433 aa6.2□□□□□ -1.42
TDP1-213ENST00000555880 OR4K17Q8NGC6 315 aa6.2□□□□□ -1.42
TDP1-213ENST00000555880 OR56B1Q8NGI3 324 aa6.2□□□□□ -1.42
TDP1-213ENST00000555880 SLC25A43Q8WUT9 341 aaPredicted RBP6.2□□□□□ -1.42
TDP1-213ENST00000555880 MRPS24Q96EL2 167 aaKnown RBP6.2□□□□□ -1.42
TDP1-213ENST00000555880 NARS2Q96I59 477 aaKnown RBP6.2□□□□□ -1.42
TDP1-213ENST00000555880 OR5B2Q96R09 309 aa6.2□□□□□ -1.42
TDP1-213ENST00000555880 URM1Q9BTM9 101 aaKnown RBP6.2□□□□□ -1.42
TDP1-213ENST00000555880 TMEM59Q9BXS4 323 aa6.2□□□□□ -1.42
TDP1-213ENST00000555880 FOXQ1Q9C009 403 aa6.2□□□□□ -1.42
TDP1-213ENST00000555880 PIGMQ9H3S5 423 aa6.2□□□□□ -1.42
TDP1-213ENST00000555880 CHMP1AQ9HD42 196 aaPredicted RBP6.2□□□□□ -1.42
TDP1-213ENST00000555880 SLC22A11Q9NSA0 550 aa6.2□□□□□ -1.42
TDP1-213ENST00000555880 KLHL13Q9P2N7 655 aa6.2□□□□□ -1.42
TDP1-213ENST00000555880 B3GAT1Q9P2W7 334 aa6.2□□□□□ -1.42
TDP1-213ENST00000555880 ASH2LQ9UBL3 628 aa6.2□□□□□ -1.42
TDP1-213ENST00000555880 PRELID1Q9Y255 219 aa6.2□□□□□ -1.42
TDP1-213ENST00000555880 KCNK7Q9Y2U2 307 aa6.2□□□□□ -1.42
TDP1-213ENST00000555880 LHFPL6Q9Y693 200 aa6.2□□□□□ -1.42
TDP1-213ENST00000555880 TRIOO75962 3097 aa6.2□□□□□ -1.42
TDP1-213ENST00000555880 ASCC3Q8N3C0 2202 aaKnown RBP6.2□□□□□ -1.42
TDP1-213ENST00000555880 IGLV3-32A0A0A0MS00 114 aa6.19□□□□□ -1.42
TDP1-213ENST00000555880 RNF222A6NCQ9 220 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms