RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 NDUFA8P51970 172 aa0.88□□□□□ -2.27
SNX6-204ENST00000555541 IL24Q13007 206 aa0.88□□□□□ -2.27
SNX6-204ENST00000555541 TPBGQ13641 420 aa0.88□□□□□ -2.27
SNX6-204ENST00000555541 TMPPEQ6ZT21 453 aa0.88□□□□□ -2.27
SNX6-204ENST00000555541 RUFY3Q7L099 469 aa0.88□□□□□ -2.27
SNX6-204ENST00000555541 OR51E1Q8TCB6 317 aa0.88□□□□□ -2.27
SNX6-204ENST00000555541 HAUS1Q96CS2 278 aa0.88□□□□□ -2.27
SNX6-204ENST00000555541 OR4K3Q96R72 315 aa0.88□□□□□ -2.27
SNX6-204ENST00000555541 ZNF442Q9H7R0 627 aa0.88□□□□□ -2.27
SNX6-204ENST00000555541 PLEKHF2Q9H8W4 249 aa0.88□□□□□ -2.27
SNX6-204ENST00000555541 TMEM106BQ9NUM4 274 aa0.88□□□□□ -2.27
SNX6-204ENST00000555541 PSMC3IPQ9P2W1 217 aaPredicted RBP0.88□□□□□ -2.27
SNX6-204ENST00000555541 COMMD3-BMI1R4GMX3 469 aa0.88□□□□□ -2.27
SNX6-204ENST00000555541 XKRY2A2RUG3 117 aa0.87□□□□□ -2.27
SNX6-204ENST00000555541 CENPBD1B2RD01 187 aa0.87□□□□□ -2.27
SNX6-204ENST00000555541 ZNF73O43830 326 aaPredicted RBP0.87□□□□□ -2.27
SNX6-204ENST00000555541 NMT2O60551 498 aa0.87□□□□□ -2.27
SNX6-204ENST00000555541 LCA5LO95447 670 aa0.87□□□□□ -2.27
SNX6-204ENST00000555541 ANXA5P08758 320 aa0.87□□□□□ -2.27
SNX6-204ENST00000555541 HTR1DP28221 377 aa0.87□□□□□ -2.27
SNX6-204ENST00000555541 MPIP34949 423 aa0.87□□□□□ -2.27
SNX6-204ENST00000555541 IFNAR2P48551 515 aa0.87□□□□□ -2.27
SNX6-204ENST00000555541 ART3Q13508 389 aa0.87□□□□□ -2.27
SNX6-204ENST00000555541 LRRC23Q53EV4 343 aaPredicted RBP0.87□□□□□ -2.27
SNX6-204ENST00000555541 PPM1LQ5SGD2 360 aa0.87□□□□□ -2.27
SNX6-204ENST00000555541 OPN5Q6U736 354 aa0.87□□□□□ -2.27
SNX6-204ENST00000555541 CD300LGQ6UXG3 332 aa0.87□□□□□ -2.27
SNX6-204ENST00000555541 NUBPLQ8TB37 319 aa0.87□□□□□ -2.27
SNX6-204ENST00000555541 ENKURQ8TC29 256 aa0.87□□□□□ -2.27
SNX6-204ENST00000555541 RXFP4Q8TDU9 374 aa0.87□□□□□ -2.27
SNX6-204ENST00000555541 KIFAP3Q92845 792 aa0.87□□□□□ -2.27
SNX6-204ENST00000555541 NRBF2Q96F24 287 aa0.87□□□□□ -2.27
SNX6-204ENST00000555541 KCNS3Q9BQ31 491 aa0.87□□□□□ -2.27
SNX6-204ENST00000555541 ILKAPQ9H0C8 392 aaPredicted RBP0.87□□□□□ -2.27
SNX6-204ENST00000555541 NEUROG2Q9H2A3 272 aa0.87□□□□□ -2.27
SNX6-204ENST00000555541 CLN8Q9UBY8 286 aa0.87□□□□□ -2.27
SNX6-204ENST00000555541 ISY1Q9ULR0 285 aaKnown RBP0.87□□□□□ -2.27
SNX6-204ENST00000555541 ZNF337Q9Y3M9 751 aa0.87□□□□□ -2.27
SNX6-204ENST00000555541 CSDC2Q9Y534 153 aaKnown RBP0.87□□□□□ -2.27
SNX6-204ENST00000555541 VWA8A3KMH1 1905 aa0.87□□□□□ -2.27
SNX6-204ENST00000555541 SCAMP2O15127 329 aaKnown RBP0.86□□□□□ -2.27
SNX6-204ENST00000555541 CLDN11O75508 207 aa0.86□□□□□ -2.27
SNX6-204ENST00000555541 UQCRFS1P1P0C7P4 283 aa0.86□□□□□ -2.27
SNX6-204ENST00000555541 CSRP1P21291 193 aaKnown RBP0.86□□□□□ -2.27
SNX6-204ENST00000555541 RPL23AP62750 156 aaKnown RBP0.86□□□□□ -2.27
SNX6-204ENST00000555541 KRTAP25-1Q3LHN0 102 aa0.86□□□□□ -2.27
SNX6-204ENST00000555541 FAM104BQ5XKR9 115 aa0.86□□□□□ -2.27
SNX6-204ENST00000555541 CBLN2Q8IUK8 224 aa0.86□□□□□ -2.27
SNX6-204ENST00000555541 IQCKQ8N0W5 287 aa0.86□□□□□ -2.27
SNX6-204ENST00000555541 ORMDL3Q8N138 153 aa0.86□□□□□ -2.27
SNX6-204ENST00000555541 SLC25A29Q8N8R3 303 aa0.86□□□□□ -2.27
SNX6-204ENST00000555541 RRAGDQ9NQL2 400 aaPredicted RBP0.86□□□□□ -2.27
SNX6-204ENST00000555541 A6NDN8 102 aa0.85□□□□□ -2.27
SNX6-204ENST00000555541 NDC80O14777 642 aa0.85□□□□□ -2.27
SNX6-204ENST00000555541 AIM2O14862 343 aa0.85□□□□□ -2.27
SNX6-204ENST00000555541 DESP17661 470 aa0.85□□□□□ -2.27
SNX6-204ENST00000555541 KLF3P57682 345 aaPredicted RBP0.85□□□□□ -2.27
SNX6-204ENST00000555541 EIF3EP60228 445 aaKnown RBP0.85□□□□□ -2.27
SNX6-204ENST00000555541 IL5RAQ01344 420 aa0.85□□□□□ -2.27
SNX6-204ENST00000555541 IFITM3Q01628 133 aa0.85□□□□□ -2.27
SNX6-204ENST00000555541 BST1Q10588 318 aa0.85□□□□□ -2.27
SNX6-204ENST00000555541 CCDC92Q53HC0 331 aaPredicted RBP0.85□□□□□ -2.27
SNX6-204ENST00000555541 PDZD11Q5EBL8 140 aa0.85□□□□□ -2.27
SNX6-204ENST00000555541 ZNF678Q5SXM1 525 aa0.85□□□□□ -2.27
SNX6-204ENST00000555541 LDLRAD2Q5SZI1 272 aa0.85□□□□□ -2.27
SNX6-204ENST00000555541 C9orf135Q5VTT2 229 aa0.85□□□□□ -2.27
SNX6-204ENST00000555541 C12orf54Q6X4T0 127 aa0.85□□□□□ -2.27
SNX6-204ENST00000555541 RP1L1Q8IWN7 2480 aaPredicted RBP0.85□□□□□ -2.27
SNX6-204ENST00000555541 BBS7Q8IWZ6 715 aa0.85□□□□□ -2.27
SNX6-204ENST00000555541 DRAM1Q8N682 238 aa0.85□□□□□ -2.27
SNX6-204ENST00000555541 SNX31Q8N9S9 440 aa0.85□□□□□ -2.27
SNX6-204ENST00000555541 BTN2A3PQ96KV6 586 aa0.85□□□□□ -2.27
SNX6-204ENST00000555541 DCAF16Q9NXF7 216 aa0.85□□□□□ -2.27
SNX6-204ENST00000555541 CCDC59Q9P031 241 aaKnown RBP0.85□□□□□ -2.27
SNX6-204ENST00000555541 HES2Q9Y543 173 aa0.85□□□□□ -2.27
SNX6-204ENST00000555541 SYNGR2O43760 224 aa0.84□□□□□ -2.27
SNX6-204ENST00000555541 RAD1O60671 282 aa0.84□□□□□ -2.27
SNX6-204ENST00000555541 TGM6O95932 706 aa0.84□□□□□ -2.27
SNX6-204ENST00000555541 MAS1P04201 325 aa0.84□□□□□ -2.27
SNX6-204ENST00000555541 TROVE2P10155 538 aaKnown RBP eCLIP0.84□□□□□ -2.27
SNX6-204ENST00000555541 OTX1P32242 354 aaPredicted RBP0.84□□□□□ -2.27
SNX6-204ENST00000555541 PCK1P35558 622 aa0.84□□□□□ -2.27
SNX6-204ENST00000555541 SLC1A1P43005 524 aa0.84□□□□□ -2.27
SNX6-204ENST00000555541 TNNT2P45379 298 aaPredicted RBP0.84□□□□□ -2.27
SNX6-204ENST00000555541 ACLYP53396 1101 aa0.84□□□□□ -2.27
SNX6-204ENST00000555541 OR12D2P58182 307 aa0.84□□□□□ -2.27
SNX6-204ENST00000555541 DDX39BQ13838 428 aaKnown RBP0.84□□□□□ -2.27
SNX6-204ENST00000555541 PSMD5Q16401 504 aa0.84□□□□□ -2.27
SNX6-204ENST00000555541 TPTE2P1Q5T6R2 138 aa0.84□□□□□ -2.27
SNX6-204ENST00000555541 LIN9Q5TKA1 542 aa0.84□□□□□ -2.27
SNX6-204ENST00000555541 OTUB2Q96DC9 234 aa0.84□□□□□ -2.27
SNX6-204ENST00000555541 C20orf166-AS1Q96NR2 134 aa0.84□□□□□ -2.27
SNX6-204ENST00000555541 TSGA13Q96PP4 275 aa0.84□□□□□ -2.27
SNX6-204ENST00000555541 SLC22A7Q9Y694 548 aa0.84□□□□□ -2.27
SNX6-204ENST00000555541 DOCK10Q96BY6 2186 aa0.84□□□□□ -2.28
SNX6-204ENST00000555541 BRD4O60885 1362 aaPredicted RBP0.83□□□□□ -2.28
SNX6-204ENST00000555541 SPATA31E1Q6ZUB1 1445 aa0.83□□□□□ -2.28
SNX6-204ENST00000555541 IGKV1-6A0A0C4DH72 117 aa0.83□□□□□ -2.28
SNX6-204ENST00000555541 M0R1X1 148 aa0.83□□□□□ -2.28
SNX6-204ENST00000555541 KCNK2O95069 426 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms