RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 GZMMP51124 257 aa6.82□□□□□ -1.32
NEK9-206ENST00000555537 LSM6P62312 80 aaKnown RBP6.82□□□□□ -1.32
NEK9-206ENST00000555537 GUCA2AQ02747 115 aa6.82□□□□□ -1.32
NEK9-206ENST00000555537 CD69Q07108 199 aa6.82□□□□□ -1.32
NEK9-206ENST00000555537 IKZF1Q13422 519 aa6.82□□□□□ -1.32
NEK9-206ENST00000555537 BLMHQ13867 455 aa6.82□□□□□ -1.32
NEK9-206ENST00000555537 CRIP3Q6Q6R5 217 aa6.82□□□□□ -1.32
NEK9-206ENST00000555537 TBPL2Q6SJ96 375 aa6.82□□□□□ -1.32
NEK9-206ENST00000555537 METAP1DQ6UB28 335 aaPredicted RBP6.82□□□□□ -1.32
NEK9-206ENST00000555537 COLCA1Q6ZS62 124 aa6.82□□□□□ -1.32
NEK9-206ENST00000555537 PGAP1Q75T13 922 aa6.82□□□□□ -1.32
NEK9-206ENST00000555537 OAFQ86UD1 273 aa6.82□□□□□ -1.32
NEK9-206ENST00000555537 GLB1L2Q8IW92 636 aa6.82□□□□□ -1.32
NEK9-206ENST00000555537 NRMQ8IXM6 262 aa6.82□□□□□ -1.32
NEK9-206ENST00000555537 FAM216BQ8N7L0 139 aa6.82□□□□□ -1.32
NEK9-206ENST00000555537 BEND2Q8NDZ0 799 aa6.82□□□□□ -1.32
NEK9-206ENST00000555537 OR5T2Q8NGG2 359 aa6.82□□□□□ -1.32
NEK9-206ENST00000555537 AJUBAQ96IF1 538 aa6.82□□□□□ -1.32
NEK9-206ENST00000555537 TSSK2Q96PF2 358 aa6.82□□□□□ -1.32
NEK9-206ENST00000555537 OR5M11Q96RB7 305 aa6.82□□□□□ -1.32
NEK9-206ENST00000555537 SYT4Q9H2B2 425 aa6.82□□□□□ -1.32
NEK9-206ENST00000555537 KAT8Q9H7Z6 458 aaKnown RBP6.82□□□□□ -1.32
NEK9-206ENST00000555537 SERTAD4Q9NUC0 356 aa6.82□□□□□ -1.32
NEK9-206ENST00000555537 RHCGQ9UBD6 479 aa6.82□□□□□ -1.32
NEK9-206ENST00000555537 POLR1DQ9Y2S0 133 aa6.82□□□□□ -1.32
NEK9-206ENST00000555537 LHFPL6Q9Y693 200 aa6.82□□□□□ -1.32
NEK9-206ENST00000555537 EPPK1P58107 5090 aaKnown RBP6.82□□□□□ -1.32
NEK9-206ENST00000555537 CD300LBA8K4G0 201 aa6.81□□□□□ -1.32
NEK9-206ENST00000555537 EFCAB9A8MZ26 197 aa6.81□□□□□ -1.32
NEK9-206ENST00000555537 XKRYO14609 159 aa6.81□□□□□ -1.32
NEK9-206ENST00000555537 ACOT8O14734 319 aa6.81□□□□□ -1.32
NEK9-206ENST00000555537 CD14P08571 375 aa6.81□□□□□ -1.32
NEK9-206ENST00000555537 ACSM4P0C7M7 580 aa6.81□□□□□ -1.32
NEK9-206ENST00000555537 TROVE2P10155 538 aaKnown RBP eCLIP6.81□□□□□ -1.32
NEK9-206ENST00000555537 AMY2BP19961 511 aa6.81□□□□□ -1.32
NEK9-206ENST00000555537 HOXD3P31249 432 aaPredicted RBP6.81□□□□□ -1.32
NEK9-206ENST00000555537 GPR4P46093 362 aa6.81□□□□□ -1.32
NEK9-206ENST00000555537 MRPL19P49406 292 aaKnown RBP6.81□□□□□ -1.32
NEK9-206ENST00000555537 GMFBP60983 142 aa6.81□□□□□ -1.32
NEK9-206ENST00000555537 HIST1H3AP68431 136 aa6.81□□□□□ -1.32
NEK9-206ENST00000555537 VMACQ2NL98 169 aa6.81□□□□□ -1.32
NEK9-206ENST00000555537 WDR38Q5JTN6 314 aa6.81□□□□□ -1.32
NEK9-206ENST00000555537 HIST2H3PS2Q5TEC6 136 aa6.81□□□□□ -1.32
NEK9-206ENST00000555537 TEX36Q5VZQ5 186 aa6.81□□□□□ -1.32
NEK9-206ENST00000555537 C11orf88Q6PI97 169 aa6.81□□□□□ -1.32
NEK9-206ENST00000555537 HIST2H3AQ71DI3 136 aa6.81□□□□□ -1.32
NEK9-206ENST00000555537 DHDDSQ86SQ9 333 aa6.81□□□□□ -1.32
NEK9-206ENST00000555537 NDUFA11Q86Y39 141 aa6.81□□□□□ -1.32
NEK9-206ENST00000555537 LINC00346Q8IVM7 164 aa6.81□□□□□ -1.32
NEK9-206ENST00000555537 C11orf53Q8IXP5 236 aa6.81□□□□□ -1.32
NEK9-206ENST00000555537 CMTM4Q8IZR5 234 aa6.81□□□□□ -1.32
NEK9-206ENST00000555537 LNX2Q8N448 690 aa6.81□□□□□ -1.32
NEK9-206ENST00000555537 WFDC9Q8NEX5 89 aa6.81□□□□□ -1.32
NEK9-206ENST00000555537 GJC3Q8NFK1 279 aa6.81□□□□□ -1.32
NEK9-206ENST00000555537 OR4F17Q8NGA8 305 aa6.81□□□□□ -1.32
NEK9-206ENST00000555537 H1FXQ92522 213 aaKnown RBP6.81□□□□□ -1.32
NEK9-206ENST00000555537 ZNF570Q96NI8 536 aa6.81□□□□□ -1.32
NEK9-206ENST00000555537 OR4F4Q96R69 305 aa6.81□□□□□ -1.32
NEK9-206ENST00000555537 CGREF1Q99674 301 aa6.81□□□□□ -1.32
NEK9-206ENST00000555537 COQ7Q99807 217 aa6.81□□□□□ -1.32
NEK9-206ENST00000555537 ADAT1Q9BUB4 502 aaKnown RBP6.81□□□□□ -1.32
NEK9-206ENST00000555537 NUAK2Q9H093 628 aa6.81□□□□□ -1.32
NEK9-206ENST00000555537 DCLRE1BQ9H816 532 aa6.81□□□□□ -1.32
NEK9-206ENST00000555537 RNPEPL1Q9HAU8 725 aa6.81□□□□□ -1.32
NEK9-206ENST00000555537 GAR1Q9NY12 217 aaKnown RBP6.81□□□□□ -1.32
NEK9-206ENST00000555537 KAAG1Q9UBP8 84 aa6.81□□□□□ -1.32
NEK9-206ENST00000555537 PRPF19Q9UMS4 504 aaKnown RBP6.81□□□□□ -1.32
NEK9-206ENST00000555537 A4GNTQ9UNA3 340 aa6.81□□□□□ -1.32
NEK9-206ENST00000555537 J3KTA2 159 aa6.8□□□□□ -1.32
NEK9-206ENST00000555537 DCTN6O00399 190 aa6.8□□□□□ -1.32
NEK9-206ENST00000555537 SOCS2O14508 198 aa6.8□□□□□ -1.32
NEK9-206ENST00000555537 CDC42EP2O14613 210 aa6.8□□□□□ -1.32
NEK9-206ENST00000555537 NDUFB3O43676 98 aa6.8□□□□□ -1.32
NEK9-206ENST00000555537 PTBP3O95758 552 aaKnown RBP6.8□□□□□ -1.32
NEK9-206ENST00000555537 CALB2P22676 271 aa6.8□□□□□ -1.32
NEK9-206ENST00000555537 RAB13P51153 203 aa6.8□□□□□ -1.32
NEK9-206ENST00000555537 BMXP51813 675 aa6.8□□□□□ -1.32
NEK9-206ENST00000555537 UBE2E1P51965 193 aa6.8□□□□□ -1.32
NEK9-206ENST00000555537 ZNF92Q03936 586 aa6.8□□□□□ -1.32
NEK9-206ENST00000555537 PRKCDQ05655 676 aa6.8□□□□□ -1.32
NEK9-206ENST00000555537 ST3GAL3Q11203 375 aa6.8□□□□□ -1.32
NEK9-206ENST00000555537 ECH1Q13011 328 aa6.8□□□□□ -1.32
NEK9-206ENST00000555537 MALLQ13021 153 aa6.8□□□□□ -1.32
NEK9-206ENST00000555537 KCNMB1Q16558 191 aa6.8□□□□□ -1.32
NEK9-206ENST00000555537 PCK2Q16822 640 aa6.8□□□□□ -1.32
NEK9-206ENST00000555537 KRTAP27-1Q3LI81 207 aa6.8□□□□□ -1.32
NEK9-206ENST00000555537 HCP5Q6MZN7 132 aa6.8□□□□□ -1.32
NEK9-206ENST00000555537 CFAP77Q6ZQR2 320 aa6.8□□□□□ -1.32
NEK9-206ENST00000555537 Q6ZS46 218 aa6.8□□□□□ -1.32
NEK9-206ENST00000555537 PTCHD4Q6ZW05 846 aa6.8□□□□□ -1.32
NEK9-206ENST00000555537 CCDC80Q76M96 950 aa6.8□□□□□ -1.32
NEK9-206ENST00000555537 MRPL21Q7Z2W9 205 aaKnown RBP6.8□□□□□ -1.32
NEK9-206ENST00000555537 FAM122BQ7Z309 247 aa6.8□□□□□ -1.32
NEK9-206ENST00000555537 OR51G2Q8NGK0 314 aa6.8□□□□□ -1.32
NEK9-206ENST00000555537 OR2AE1Q8NHA4 323 aa6.8□□□□□ -1.32
NEK9-206ENST00000555537 PIFOQ8TCI5 191 aa6.8□□□□□ -1.32
NEK9-206ENST00000555537 SLC7A13Q8TCU3 470 aa6.8□□□□□ -1.32
NEK9-206ENST00000555537 LRRC29Q8WV35 223 aa6.8□□□□□ -1.32
NEK9-206ENST00000555537 RASSF5Q8WWW0 418 aa6.8□□□□□ -1.32
NEK9-206ENST00000555537 PITX2Q99697 317 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms