RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 KRTAP27-1Q3LI81 207 aa9.4□□□□□ -0.9
SHMT2-218ENST00000555213 RGS7BPQ6MZT1 257 aaPredicted RBP9.4□□□□□ -0.9
SHMT2-218ENST00000555213 KCTD18Q6PI47 426 aaPredicted RBP9.4□□□□□ -0.9
SHMT2-218ENST00000555213 RHOUQ7L0Q8 258 aa9.4□□□□□ -0.9
SHMT2-218ENST00000555213 MUC15Q8N387 334 aa9.4□□□□□ -0.9
SHMT2-218ENST00000555213 PAQR4Q8N4S7 273 aaPredicted RBP9.4□□□□□ -0.9
SHMT2-218ENST00000555213 YIPF7Q8N8F6 280 aa9.4□□□□□ -0.9
SHMT2-218ENST00000555213 OR5L1Q8NGL2 311 aa9.4□□□□□ -0.9
SHMT2-218ENST00000555213 OR2G2Q8NGZ5 317 aa9.4□□□□□ -0.9
SHMT2-218ENST00000555213 LILRB1Q8NHL6 650 aaPredicted RBP9.4□□□□□ -0.9
SHMT2-218ENST00000555213 DYNC2LI1Q8TCX1 351 aa9.4□□□□□ -0.9
SHMT2-218ENST00000555213 TMEM171Q8WVE6 324 aa9.4□□□□□ -0.9
SHMT2-218ENST00000555213 NEUROG1Q92886 237 aa9.4□□□□□ -0.9
SHMT2-218ENST00000555213 NINJ1Q92982 152 aa9.4□□□□□ -0.9
SHMT2-218ENST00000555213 PIGTQ969N2 578 aa9.4□□□□□ -0.9
SHMT2-218ENST00000555213 C4orf45Q96LM5 186 aa9.4□□□□□ -0.9
SHMT2-218ENST00000555213 PDCD1LG2Q9BQ51 273 aa9.4□□□□□ -0.9
SHMT2-218ENST00000555213 OR51B6Q9H340 312 aa9.4□□□□□ -0.9
SHMT2-218ENST00000555213 CXorf56Q9H5V9 222 aa9.4□□□□□ -0.9
SHMT2-218ENST00000555213 TRIM36Q9NQ86 728 aa9.4□□□□□ -0.9
SHMT2-218ENST00000555213 G6PC2Q9NQR9 355 aa9.4□□□□□ -0.9
SHMT2-218ENST00000555213 CMAHPQ9Y471 501 aa9.4□□□□□ -0.9
SHMT2-218ENST00000555213 LRP12Q9Y561 859 aa9.4□□□□□ -0.9
SHMT2-218ENST00000555213 PRR14LQ5THK1 2151 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 TRBV2A0A0J9YWF9 115 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 F5H5K5 113 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 M0R135 149 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 PIN1P1O15428 100 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 ICMTO60725 284 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 ZNF254O75437 659 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 ZFPL1O95159 310 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 KRT8P05787 483 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 H2BFMP0C1H6 154 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 OR4A8P0C604 315 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 GALP22466 123 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 TUBG1P23258 451 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 PSMA1P25786 263 aaKnown RBP9.39□□□□□ -0.91
SHMT2-218ENST00000555213 GCH1P30793 250 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 DCTDP32321 178 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 THBS4P35443 961 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 RPS19P39019 145 aaKnown RBP9.39□□□□□ -0.91
SHMT2-218ENST00000555213 MAGEB1P43366 347 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 TAS2R43P59537 309 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 SLC3A1Q07837 685 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 MFGE8Q08431 387 aaPredicted RBP9.39□□□□□ -0.91
SHMT2-218ENST00000555213 WDR38Q5JTN6 314 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 DRAM2Q6UX65 266 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 RFPL4BQ6ZWI9 263 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 PRSS45Q7RTY3 260 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 KRT77Q7Z794 578 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 NAA40Q86UY6 237 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 CATSPERDQ86XM0 798 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.39□□□□□ -0.91
SHMT2-218ENST00000555213 RDH10Q8IZV5 341 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 OR1J1Q8NGS3 322 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 OR13C5Q8NGS8 318 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 APOBEC3DQ96AK3 386 aaPredicted RBP9.39□□□□□ -0.91
SHMT2-218ENST00000555213 SMIM19Q96E16 107 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 MRPL48Q96GC5 212 aaKnown RBP9.39□□□□□ -0.91
SHMT2-218ENST00000555213 ZNF799Q96GE5 643 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 MYCBPQ99417 103 aaPredicted RBP9.39□□□□□ -0.91
SHMT2-218ENST00000555213 TMED9Q9BVK6 235 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 MROQ9BYG7 248 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 PLK3Q9H4B4 646 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 NIPAL2Q9H841 368 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 SP140LQ9H930 580 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 TUBG2Q9NRH3 451 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 CBLN4Q9NTU7 201 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 TBCCD1Q9NVR7 557 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 ZNF319Q9P2F9 582 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 GPR160Q9UJ42 338 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 IKZF2Q9UKS7 526 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 LAMP3Q9UQV4 416 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 SLC22A13Q9Y226 551 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 PLEKHA6Q9Y2H5 1048 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 NOTCH2Q04721 2471 aa9.39□□□□□ -0.91
SHMT2-218ENST00000555213 CADP27708 2225 aa9.38□□□□□ -0.91
SHMT2-218ENST00000555213 RTTNQ86VV8 2226 aa9.38□□□□□ -0.91
SHMT2-218ENST00000555213 LOC100506127A0A0U1RQW1 187 aa9.38□□□□□ -0.91
SHMT2-218ENST00000555213 C5orf63A6NC05 138 aa9.38□□□□□ -0.91
SHMT2-218ENST00000555213 B9A039 149 aa9.38□□□□□ -0.91
SHMT2-218ENST00000555213 GABRPO00591 440 aa9.38□□□□□ -0.91
SHMT2-218ENST00000555213 SLC22A1O15245 554 aa9.38□□□□□ -0.91
SHMT2-218ENST00000555213 GPRIN2O60269 458 aa9.38□□□□□ -0.91
SHMT2-218ENST00000555213 HLA-DPB1P04440 258 aa9.38□□□□□ -0.91
SHMT2-218ENST00000555213 ERCC1P07992 297 aaPredicted RBP9.38□□□□□ -0.91
SHMT2-218ENST00000555213 DBHP09172 617 aa9.38□□□□□ -0.91
SHMT2-218ENST00000555213 OTX1P32242 354 aaPredicted RBP9.38□□□□□ -0.91
SHMT2-218ENST00000555213 WNT5AP41221 380 aa9.38□□□□□ -0.91
SHMT2-218ENST00000555213 CCR9P51686 369 aa9.38□□□□□ -0.91
SHMT2-218ENST00000555213 KLF3P57682 345 aaPredicted RBP9.38□□□□□ -0.91
SHMT2-218ENST00000555213 PPP1CBP62140 327 aa9.38□□□□□ -0.91
SHMT2-218ENST00000555213 MALLQ13021 153 aa9.38□□□□□ -0.91
SHMT2-218ENST00000555213 MRPL28Q13084 256 aaKnown RBP9.38□□□□□ -0.91
SHMT2-218ENST00000555213 EFNB3Q15768 340 aa9.38□□□□□ -0.91
SHMT2-218ENST00000555213 ADIPOQQ15848 244 aa9.38□□□□□ -0.91
SHMT2-218ENST00000555213 MOGQ16653 247 aa9.38□□□□□ -0.91
SHMT2-218ENST00000555213 DTX2Q86UW9 622 aa9.38□□□□□ -0.91
SHMT2-218ENST00000555213 ZNF101Q8IZC7 436 aa9.38□□□□□ -0.91
SHMT2-218ENST00000555213 ZNF283Q8N7M2 679 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms