RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 FAM169BQ8N8A8 192 aa10.76□□□□□ -0.69
SHMT2-214ENST00000554604 ZNF511Q8NB15 262 aa10.76□□□□□ -0.69
SHMT2-214ENST00000554604 GHSRQ92847 366 aa10.76□□□□□ -0.69
SHMT2-214ENST00000554604 KCTD12Q96CX2 325 aaKnown RBP10.76□□□□□ -0.69
SHMT2-214ENST00000554604 FBXO17Q96EF6 278 aa10.76□□□□□ -0.69
SHMT2-214ENST00000554604 TSSK2Q96PF2 358 aa10.76□□□□□ -0.69
SHMT2-214ENST00000554604 SDHCQ99643 169 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-214ENST00000554604 ATF6BQ99941 703 aa10.76□□□□□ -0.69
SHMT2-214ENST00000554604 REG4Q9BYZ8 158 aa10.76□□□□□ -0.69
SHMT2-214ENST00000554604 SYT4Q9H2B2 425 aa10.76□□□□□ -0.69
SHMT2-214ENST00000554604 WDR76Q9H967 626 aa10.76□□□□□ -0.69
SHMT2-214ENST00000554604 ABCB9Q9NP78 766 aa10.76□□□□□ -0.69
SHMT2-214ENST00000554604 GNG8Q9UK08 70 aa10.76□□□□□ -0.69
SHMT2-214ENST00000554604 B9D1Q9UPM9 204 aa10.76□□□□□ -0.69
SHMT2-214ENST00000554604 GRIP1Q9Y3R0 1128 aa10.76□□□□□ -0.69
SHMT2-214ENST00000554604 TRAV1-2A0A0B4J238 106 aa10.75□□□□□ -0.69
SHMT2-214ENST00000554604 TRBV2A0A0J9YWF9 115 aa10.75□□□□□ -0.69
SHMT2-214ENST00000554604 ANKRD61A6NGH8 418 aa10.75□□□□□ -0.69
SHMT2-214ENST00000554604 VSTM5A8MXK1 200 aa10.75□□□□□ -0.69
SHMT2-214ENST00000554604 CENPBD1B2RD01 187 aa10.75□□□□□ -0.69
SHMT2-214ENST00000554604 H7C1C5 153 aa10.75□□□□□ -0.69
SHMT2-214ENST00000554604 PFDN1O60925 122 aa10.75□□□□□ -0.69
SHMT2-214ENST00000554604 ARL6IP5O75915 188 aa10.75□□□□□ -0.69
SHMT2-214ENST00000554604 IGKV3-15P01624 115 aa10.75□□□□□ -0.69
SHMT2-214ENST00000554604 IGLV1-44P01699 117 aa10.75□□□□□ -0.69
SHMT2-214ENST00000554604 CD79AP11912 226 aa10.75□□□□□ -0.69
SHMT2-214ENST00000554604 HOXB4P17483 251 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-214ENST00000554604 DAP3P51398 398 aaKnown RBP10.75□□□□□ -0.69
SHMT2-214ENST00000554604 DEFA1P59665 94 aa10.75□□□□□ -0.69
SHMT2-214ENST00000554604 DEFA3P59666 94 aa10.75□□□□□ -0.69
SHMT2-214ENST00000554604 SNRPD2P62316 118 aaKnown RBP10.75□□□□□ -0.69
SHMT2-214ENST00000554604 LCN6P62502 163 aa10.75□□□□□ -0.69
SHMT2-214ENST00000554604 INSL4Q14641 139 aa10.75□□□□□ -0.69
SHMT2-214ENST00000554604 ACSM3Q53FZ2 586 aa10.75□□□□□ -0.69
SHMT2-214ENST00000554604 STEAP3Q658P3 488 aa10.75□□□□□ -0.69
SHMT2-214ENST00000554604 VHLLQ6RSH7 139 aa10.75□□□□□ -0.69
SHMT2-214ENST00000554604 CLEC2AQ6UVW9 174 aa10.75□□□□□ -0.69
SHMT2-214ENST00000554604 LYPD4Q6UWN0 246 aa10.75□□□□□ -0.69
SHMT2-214ENST00000554604 UNQ9370/PRO34162Q6UXP9 181 aa10.75□□□□□ -0.69
SHMT2-214ENST00000554604 FAM220AQ7Z4H9 259 aa10.75□□□□□ -0.69
SHMT2-214ENST00000554604 CEACAM19Q7Z692 300 aa10.75□□□□□ -0.69
SHMT2-214ENST00000554604 MDP1Q86V88 176 aa10.75□□□□□ -0.69
SHMT2-214ENST00000554604 SNX29P2Q8IUI4 249 aa10.75□□□□□ -0.69
SHMT2-214ENST00000554604 MAPK1IP1LQ8NDC0 245 aa10.75□□□□□ -0.69
SHMT2-214ENST00000554604 OR6X1Q8NH79 312 aa10.75□□□□□ -0.69
SHMT2-214ENST00000554604 ASB10Q8WXI3 467 aa10.75□□□□□ -0.69
SHMT2-214ENST00000554604 NANOS1Q8WY41 292 aaKnown RBP10.75□□□□□ -0.69
SHMT2-214ENST00000554604 HTRA1Q92743 480 aa10.75□□□□□ -0.69
SHMT2-214ENST00000554604 INTS14Q96SY0 518 aa10.75□□□□□ -0.69
SHMT2-214ENST00000554604 CA10Q9NS85 328 aa10.75□□□□□ -0.69
SHMT2-214ENST00000554604 ACOXLQ9NUZ1 547 aa10.75□□□□□ -0.69
SHMT2-214ENST00000554604 ADAM30Q9UKF2 790 aa10.75□□□□□ -0.69
SHMT2-214ENST00000554604 IGLV1-36A0A0B4J1U3 117 aa10.74□□□□□ -0.69
SHMT2-214ENST00000554604 SLC22A23A1A5C7 686 aa10.74□□□□□ -0.69
SHMT2-214ENST00000554604 H7C417 338 aa10.74□□□□□ -0.69
SHMT2-214ENST00000554604 MAGEB4O15481 346 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-214ENST00000554604 ABHD16AO95870 558 aa10.74□□□□□ -0.69
SHMT2-214ENST00000554604 PTTG1O95997 202 aa10.74□□□□□ -0.69
SHMT2-214ENST00000554604 HLA-HP01893 362 aa10.74□□□□□ -0.69
SHMT2-214ENST00000554604 KRT8P05787 483 aa10.74□□□□□ -0.69
SHMT2-214ENST00000554604 CELA3BP08861 270 aa10.74□□□□□ -0.69
SHMT2-214ENST00000554604 B4GALT1P15291 398 aa10.74□□□□□ -0.69
SHMT2-214ENST00000554604 ALOX5APP20292 161 aa10.74□□□□□ -0.69
SHMT2-214ENST00000554604 CRABP1P29762 137 aa10.74□□□□□ -0.69
SHMT2-214ENST00000554604 SERPINF1P36955 418 aa10.74□□□□□ -0.69
SHMT2-214ENST00000554604 DSCR9P59020 149 aa10.74□□□□□ -0.69
SHMT2-214ENST00000554604 RPS11P62280 158 aaKnown RBP eCLIP10.74□□□□□ -0.69
SHMT2-214ENST00000554604 MELKQ14680 651 aa10.74□□□□□ -0.69
SHMT2-214ENST00000554604 ZNF79Q15937 498 aa10.74□□□□□ -0.69
SHMT2-214ENST00000554604 GSG1Q2KHT4 349 aa10.74□□□□□ -0.69
SHMT2-214ENST00000554604 ZMAT1Q5H9K5 638 aa10.74□□□□□ -0.69
SHMT2-214ENST00000554604 DNM1P34Q6PK57 102 aa10.74□□□□□ -0.69
SHMT2-214ENST00000554604 NHLRC1Q6VVB1 395 aa10.74□□□□□ -0.69
SHMT2-214ENST00000554604 WDFY1Q8IWB7 410 aa10.74□□□□□ -0.69
SHMT2-214ENST00000554604 GDPD1Q8N9F7 314 aa10.74□□□□□ -0.69
SHMT2-214ENST00000554604 IL17RDQ8NFM7 739 aa10.74□□□□□ -0.69
SHMT2-214ENST00000554604 SETD6Q8TBK2 473 aa10.74□□□□□ -0.69
SHMT2-214ENST00000554604 ASB17Q8WXJ9 295 aa10.74□□□□□ -0.69
SHMT2-214ENST00000554604 SLC25A44Q96H78 314 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-214ENST00000554604 FOXB1Q99853 325 aa10.74□□□□□ -0.69
SHMT2-214ENST00000554604 TTTY10Q9BZA0 68 aa10.74□□□□□ -0.69
SHMT2-214ENST00000554604 SRRQ9GZT4 340 aa10.74□□□□□ -0.69
SHMT2-214ENST00000554604 GLTPQ9NZD2 209 aa10.74□□□□□ -0.69
SHMT2-214ENST00000554604 LAMP5Q9UJQ1 280 aa10.74□□□□□ -0.69
SHMT2-214ENST00000554604 KLHDC2Q9Y2U9 406 aa10.74□□□□□ -0.69
SHMT2-214ENST00000554604 FUOMA2VDF0 154 aa10.73□□□□□ -0.69
SHMT2-214ENST00000554604 SMIM30A4D0T7 59 aa10.73□□□□□ -0.69
SHMT2-214ENST00000554604 TVP23AA6NH52 213 aa10.73□□□□□ -0.69
SHMT2-214ENST00000554604 PRR32B1ATL7 298 aa10.73□□□□□ -0.69
SHMT2-214ENST00000554604 TMEM127O75204 238 aa10.73□□□□□ -0.69
SHMT2-214ENST00000554604 UCHL1P09936 223 aa10.73□□□□□ -0.69
SHMT2-214ENST00000554604 OR4A8P0C604 315 aa10.73□□□□□ -0.69
SHMT2-214ENST00000554604 CALCRP30988 508 aa10.73□□□□□ -0.69
SHMT2-214ENST00000554604 BCAP31P51572 246 aa10.73□□□□□ -0.69
SHMT2-214ENST00000554604 EFNA4P52798 201 aa10.73□□□□□ -0.69
SHMT2-214ENST00000554604 CAV3P56539 151 aa10.73□□□□□ -0.69
SHMT2-214ENST00000554604 CLRN1P58418 232 aa10.73□□□□□ -0.69
SHMT2-214ENST00000554604 RIN1Q13671 783 aa10.73□□□□□ -0.69
SHMT2-214ENST00000554604 YIF1BQ5BJH7 314 aa10.73□□□□□ -0.69
SHMT2-214ENST00000554604 FAM131AQ6UXB0 335 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms