RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 MAP1LC3CQ9BXW4 147 aa7.96□□□□□ -1.14
VPS13D-212ENST00000543766 AKTIPQ9H8T0 292 aa7.96□□□□□ -1.14
VPS13D-212ENST00000543766 ZDHHC11Q9H8X9 412 aa7.96□□□□□ -1.14
VPS13D-212ENST00000543766 BET1LQ9NYM9 111 aa7.96□□□□□ -1.14
VPS13D-212ENST00000543766 TCF19Q9Y242 345 aa7.96□□□□□ -1.14
VPS13D-212ENST00000543766 GLOD5A6NK44 160 aa7.96□□□□□ -1.14
VPS13D-212ENST00000543766 C2CD4BA6NLJ0 364 aa7.96□□□□□ -1.14
VPS13D-212ENST00000543766 CSN2P05814 226 aa7.96□□□□□ -1.14
VPS13D-212ENST00000543766 UMODP07911 640 aa7.96□□□□□ -1.14
VPS13D-212ENST00000543766 ACHEP22303 614 aa7.96□□□□□ -1.14
VPS13D-212ENST00000543766 CST5P28325 142 aaPredicted RBP7.96□□□□□ -1.14
VPS13D-212ENST00000543766 DVL1P1P54792 670 aaPredicted RBP7.96□□□□□ -1.14
VPS13D-212ENST00000543766 CLDN20P56880 219 aa7.96□□□□□ -1.14
VPS13D-212ENST00000543766 HLA-BQ31612 363 aa7.96□□□□□ -1.14
VPS13D-212ENST00000543766 FAM71F2Q6NXP2 309 aa7.96□□□□□ -1.14
VPS13D-212ENST00000543766 PNLDC1Q8NA58 520 aaKnown RBP7.96□□□□□ -1.14
VPS13D-212ENST00000543766 NECAP1Q8NC96 275 aa7.96□□□□□ -1.14
VPS13D-212ENST00000543766 OR2T27Q8NH04 317 aa7.96□□□□□ -1.14
VPS13D-212ENST00000543766 FNDC9Q8TBE3 224 aa7.96□□□□□ -1.14
VPS13D-212ENST00000543766 BLNKQ8WV28 456 aa7.96□□□□□ -1.14
VPS13D-212ENST00000543766 SNX22Q96L94 193 aa7.96□□□□□ -1.14
VPS13D-212ENST00000543766 JSRP1Q96MG2 331 aaPredicted RBP7.96□□□□□ -1.14
VPS13D-212ENST00000543766 AP1S3Q96PC3 154 aa7.96□□□□□ -1.14
VPS13D-212ENST00000543766 OR51E2Q9H255 320 aa7.96□□□□□ -1.14
VPS13D-212ENST00000543766 SFXN1Q9H9B4 322 aa7.96□□□□□ -1.14
VPS13D-212ENST00000543766 HCFC2Q9Y5Z7 792 aa7.96□□□□□ -1.14
VPS13D-212ENST00000543766 SMIM9A6NGZ8 99 aa7.95□□□□□ -1.14
VPS13D-212ENST00000543766 TSPAN15O95858 294 aa7.95□□□□□ -1.14
VPS13D-212ENST00000543766 ADORA2BP29275 332 aa7.95□□□□□ -1.14
VPS13D-212ENST00000543766 GABRA2P47869 451 aa7.95□□□□□ -1.14
VPS13D-212ENST00000543766 PPP1R1AQ13522 171 aa7.95□□□□□ -1.14
VPS13D-212ENST00000543766 TECRLQ5HYJ1 363 aa7.95□□□□□ -1.14
VPS13D-212ENST00000543766 ZNF474Q6S9Z5 364 aaPredicted RBP7.95□□□□□ -1.14
VPS13D-212ENST00000543766 ZNF808Q8N4W9 903 aaPredicted RBP7.95□□□□□ -1.14
VPS13D-212ENST00000543766 OR8G5Q8NG78 346 aa7.95□□□□□ -1.14
VPS13D-212ENST00000543766 PGLYRP2Q96PD5 576 aa7.95□□□□□ -1.14
VPS13D-212ENST00000543766 EFCAB11Q9BUY7 163 aa7.95□□□□□ -1.14
VPS13D-212ENST00000543766 C19orf24Q9BVV8 132 aa7.95□□□□□ -1.14
VPS13D-212ENST00000543766 TAPBPLQ9BX59 468 aa7.95□□□□□ -1.14
VPS13D-212ENST00000543766 POMKQ9H5K3 350 aa7.95□□□□□ -1.14
VPS13D-212ENST00000543766 TXNL4BQ9NX01 149 aaKnown RBP7.95□□□□□ -1.14
VPS13D-212ENST00000543766 BTRCQ9Y297 605 aa7.95□□□□□ -1.14
VPS13D-212ENST00000543766 AK6Q9Y3D8 172 aaKnown RBP7.95□□□□□ -1.14
VPS13D-212ENST00000543766 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.95□□□□□ -1.14
VPS13D-212ENST00000543766 SLC16A8O95907 504 aa7.95□□□□□ -1.14
VPS13D-212ENST00000543766 GAPDHP04406 335 aaKnown RBP7.95□□□□□ -1.14
VPS13D-212ENST00000543766 IFNW1P05000 195 aa7.95□□□□□ -1.14
VPS13D-212ENST00000543766 CAV2P51636 162 aa7.95□□□□□ -1.14
VPS13D-212ENST00000543766 GEMP55040 296 aa7.95□□□□□ -1.14
VPS13D-212ENST00000543766 EBPQ15125 230 aaKnown RBP7.95□□□□□ -1.14
VPS13D-212ENST00000543766 RNPS1Q15287 305 aaKnown RBP7.95□□□□□ -1.14
VPS13D-212ENST00000543766 ELAVL1Q15717 326 aaKnown RBP7.95□□□□□ -1.14
VPS13D-212ENST00000543766 TTLL9Q3SXZ7 439 aa7.95□□□□□ -1.14
VPS13D-212ENST00000543766 FAM78BQ5VT40 261 aa7.95□□□□□ -1.14
VPS13D-212ENST00000543766 TMUB2Q71RG4 321 aa7.95□□□□□ -1.14
VPS13D-212ENST00000543766 SOSTQ9BQB4 213 aa7.95□□□□□ -1.14
VPS13D-212ENST00000543766 RHOJQ9H4E5 214 aa7.95□□□□□ -1.14
VPS13D-212ENST00000543766 FNDC4Q9H6D8 234 aaPredicted RBP7.95□□□□□ -1.14
VPS13D-212ENST00000543766 NINQ8N4C6 2090 aa7.95□□□□□ -1.14
VPS13D-212ENST00000543766 FAM90A27PA6NNH2 459 aa7.95□□□□□ -1.14
VPS13D-212ENST00000543766 TAAR5O14804 337 aa7.95□□□□□ -1.14
VPS13D-212ENST00000543766 GEMIN2O14893 280 aaKnown RBP7.95□□□□□ -1.14
VPS13D-212ENST00000543766 FCN3O75636 299 aa7.95□□□□□ -1.14
VPS13D-212ENST00000543766 WISP3O95389 354 aaPredicted RBP7.95□□□□□ -1.14
VPS13D-212ENST00000543766 CLDN7O95471 211 aa7.95□□□□□ -1.14
VPS13D-212ENST00000543766 AIFM1O95831 613 aa7.95□□□□□ -1.14
VPS13D-212ENST00000543766 ADRA1AP35348 466 aa7.95□□□□□ -1.14
VPS13D-212ENST00000543766 TSFMP43897 325 aaKnown RBP7.95□□□□□ -1.14
VPS13D-212ENST00000543766 TAS2R30P59541 319 aa7.95□□□□□ -1.14
VPS13D-212ENST00000543766 SNRPD1P62314 119 aaKnown RBP7.95□□□□□ -1.14
VPS13D-212ENST00000543766 ZNF415Q09FC8 603 aa7.95□□□□□ -1.14
VPS13D-212ENST00000543766 FUT7Q11130 342 aa7.95□□□□□ -1.14
VPS13D-212ENST00000543766 SPATA31B1PQ5VZV4 182 aa7.95□□□□□ -1.14
VPS13D-212ENST00000543766 METRNLQ641Q3 311 aa7.95□□□□□ -1.14
VPS13D-212ENST00000543766 NHLRC1Q6VVB1 395 aa7.95□□□□□ -1.14
VPS13D-212ENST00000543766 HIST3H2BBQ8N257 126 aa7.95□□□□□ -1.14
VPS13D-212ENST00000543766 PGBD5Q8N414 524 aa7.95□□□□□ -1.14
VPS13D-212ENST00000543766 STPG4Q8N801 248 aa7.95□□□□□ -1.14
VPS13D-212ENST00000543766 TSLPQ969D9 159 aa7.95□□□□□ -1.14
VPS13D-212ENST00000543766 LRRC3Q9BY71 257 aa7.95□□□□□ -1.14
VPS13D-212ENST00000543766 TRAPPC2LQ9UL33 140 aa7.95□□□□□ -1.14
VPS13D-212ENST00000543766 SPIN1Q9Y657 262 aaPredicted RBP7.95□□□□□ -1.14
VPS13D-212ENST00000543766 LAMA2P24043 3122 aaKnown RBP7.95□□□□□ -1.14
VPS13D-212ENST00000543766 RLFQ13129 1914 aa7.95□□□□□ -1.14
VPS13D-212ENST00000543766 ALPK3Q96L96 1907 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 IGHV2-70DA0A0C4DH43 119 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 RAB27BO00194 218 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 FCMRO60667 390 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 CST1P01037 141 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 TK1P04183 234 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 F2RP25116 425 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 HRH1P35367 487 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 JAK3P52333 1124 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 PGGT1BP53609 377 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 HSD11B2P80365 405 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 EGR4Q05215 589 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 OR4F3Q6IEY1 312 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 PTCRAQ6ISU1 281 aaPredicted RBP7.94□□□□□ -1.14
VPS13D-212ENST00000543766 ARIH2OSQ8N7S6 290 aa7.94□□□□□ -1.14
VPS13D-212ENST00000543766 ZNF709Q8N972 641 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms