RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 BCL2L10Q9HD36 194 aa6.84□□□□□ -1.31
MRPS35-204ENST00000542199 SLC17A5Q9NRA2 495 aa6.84□□□□□ -1.31
MRPS35-204ENST00000542199 CBLN4Q9NTU7 201 aa6.84□□□□□ -1.31
MRPS35-204ENST00000542199 USH1CQ9Y6N9 552 aa6.84□□□□□ -1.31
MRPS35-204ENST00000542199 TENM1Q9UKZ4 2725 aa6.83□□□□□ -1.32
MRPS35-204ENST00000542199 TRAV34A0A0B4J273 112 aa6.83□□□□□ -1.32
MRPS35-204ENST00000542199 PMS2P5A8MQ11 134 aa6.83□□□□□ -1.32
MRPS35-204ENST00000542199 FTCDNL1E5RQL4 147 aa6.83□□□□□ -1.32
MRPS35-204ENST00000542199 H7C417 338 aa6.83□□□□□ -1.32
MRPS35-204ENST00000542199 M0R1B8 84 aa6.83□□□□□ -1.32
MRPS35-204ENST00000542199 ATP6V0E1O15342 81 aa6.83□□□□□ -1.32
MRPS35-204ENST00000542199 CRLF1O75462 422 aa6.83□□□□□ -1.32
MRPS35-204ENST00000542199 TGDSO95455 350 aa6.83□□□□□ -1.32
MRPS35-204ENST00000542199 ETS2P15036 469 aa6.83□□□□□ -1.32
MRPS35-204ENST00000542199 PTNP21246 168 aa6.83□□□□□ -1.32
MRPS35-204ENST00000542199 BMXP51813 675 aa6.83□□□□□ -1.32
MRPS35-204ENST00000542199 DMTNQ08495 405 aa6.83□□□□□ -1.32
MRPS35-204ENST00000542199 NRF1Q16656 503 aa6.83□□□□□ -1.32
MRPS35-204ENST00000542199 KRTAP24-1Q3LI83 254 aa6.83□□□□□ -1.32
MRPS35-204ENST00000542199 LBHQ53QV2 105 aaPredicted RBP6.83□□□□□ -1.32
MRPS35-204ENST00000542199 C9orf135Q5VTT2 229 aa6.83□□□□□ -1.32
MRPS35-204ENST00000542199 C1orf140Q5VVS0 124 aa6.83□□□□□ -1.32
MRPS35-204ENST00000542199 ZNF544Q6NX49 715 aa6.83□□□□□ -1.32
MRPS35-204ENST00000542199 C6orf89Q6UWU4 347 aa6.83□□□□□ -1.32
MRPS35-204ENST00000542199 AAED1Q7RTV5 226 aa6.83□□□□□ -1.32
MRPS35-204ENST00000542199 FUNDC1Q8IVP5 155 aa6.83□□□□□ -1.32
MRPS35-204ENST00000542199 MSRB3Q8IXL7 192 aa6.83□□□□□ -1.32
MRPS35-204ENST00000542199 MUC15Q8N387 334 aa6.83□□□□□ -1.32
MRPS35-204ENST00000542199 MFSD8Q8NHS3 518 aa6.83□□□□□ -1.32
MRPS35-204ENST00000542199 PHLDA1Q8WV24 401 aaPredicted RBP6.83□□□□□ -1.32
MRPS35-204ENST00000542199 MAL2Q969L2 176 aa6.83□□□□□ -1.32
MRPS35-204ENST00000542199 C1QTNF6Q9BXI9 259 aa6.83□□□□□ -1.32
MRPS35-204ENST00000542199 CACNG6Q9BXT2 260 aa6.83□□□□□ -1.32
MRPS35-204ENST00000542199 ARMC7Q9H6L4 198 aa6.83□□□□□ -1.32
MRPS35-204ENST00000542199 SLC25A37Q9NYZ2 338 aa6.83□□□□□ -1.32
MRPS35-204ENST00000542199 IFT52Q9Y366 437 aa6.83□□□□□ -1.32
MRPS35-204ENST00000542199 GMEB1Q9Y692 573 aa6.83□□□□□ -1.32
MRPS35-204ENST00000542199 POMT1Q9Y6A1 747 aa6.83□□□□□ -1.32
MRPS35-204ENST00000542199 IGHV4-30-2A0A087WSY4 118 aa6.82□□□□□ -1.32
MRPS35-204ENST00000542199 OR6C65A6NJZ3 312 aa6.82□□□□□ -1.32
MRPS35-204ENST00000542199 POLR3GO15318 223 aaPredicted RBP6.82□□□□□ -1.32
MRPS35-204ENST00000542199 CD5LO43866 347 aa6.82□□□□□ -1.32
MRPS35-204ENST00000542199 ERLIN1O75477 346 aa6.82□□□□□ -1.32
MRPS35-204ENST00000542199 SAGP10523 405 aaPredicted RBP6.82□□□□□ -1.32
MRPS35-204ENST00000542199 NCF2P19878 526 aaPredicted RBP6.82□□□□□ -1.32
MRPS35-204ENST00000542199 FABP6P51161 128 aa6.82□□□□□ -1.32
MRPS35-204ENST00000542199 PRPS1P60891 318 aa6.82□□□□□ -1.32
MRPS35-204ENST00000542199 HOXC5Q00444 222 aa6.82□□□□□ -1.32
MRPS35-204ENST00000542199 HIKESHIQ53FT3 197 aa6.82□□□□□ -1.32
MRPS35-204ENST00000542199 ZNF311Q5JNZ3 666 aa6.82□□□□□ -1.32
MRPS35-204ENST00000542199 AGBL2Q5U5Z8 902 aa6.82□□□□□ -1.32
MRPS35-204ENST00000542199 ABHD12BQ7Z5M8 362 aaPredicted RBP6.82□□□□□ -1.32
MRPS35-204ENST00000542199 COMTD1Q86VU5 262 aa6.82□□□□□ -1.32
MRPS35-204ENST00000542199 C10orf111Q8N326 155 aa6.82□□□□□ -1.32
MRPS35-204ENST00000542199 FAM71F1Q96KD3 344 aaPredicted RBP6.82□□□□□ -1.32
MRPS35-204ENST00000542199 ZNF317Q96PQ6 595 aaPredicted RBP6.82□□□□□ -1.32
MRPS35-204ENST00000542199 EBF4Q9BQW3 602 aa6.82□□□□□ -1.32
MRPS35-204ENST00000542199 TAPBPLQ9BX59 468 aa6.82□□□□□ -1.32
MRPS35-204ENST00000542199 KRTAP1-5Q9BYS1 174 aa6.82□□□□□ -1.32
MRPS35-204ENST00000542199 C12orf10Q9HB07 376 aa6.82□□□□□ -1.32
MRPS35-204ENST00000542199 SLCO1B3Q9NPD5 702 aa6.82□□□□□ -1.32
MRPS35-204ENST00000542199 STUB1Q9UNE7 303 aa6.82□□□□□ -1.32
MRPS35-204ENST00000542199 RASD1Q9Y272 281 aa6.82□□□□□ -1.32
MRPS35-204ENST00000542199 ARFGEF3Q5TH69 2177 aa6.82□□□□□ -1.32
MRPS35-204ENST00000542199 HEATR1Q9H583 2144 aaKnown RBP6.82□□□□□ -1.32
MRPS35-204ENST00000542199 IGKV1D-42A0A075B6H8 117 aa6.81□□□□□ -1.32
MRPS35-204ENST00000542199 IGHV1-18A0A0C4DH31 117 aa6.81□□□□□ -1.32
MRPS35-204ENST00000542199 ATP6V1G2-DDX39BF2Z307 99 aa6.81□□□□□ -1.32
MRPS35-204ENST00000542199 RPL36A-HNRNPH2H7BZ11 118 aa6.81□□□□□ -1.32
MRPS35-204ENST00000542199 TLX2O43763 284 aaPredicted RBP6.81□□□□□ -1.32
MRPS35-204ENST00000542199 UPK3AO75631 287 aa6.81□□□□□ -1.32
MRPS35-204ENST00000542199 AHSA1O95433 338 aa6.81□□□□□ -1.32
MRPS35-204ENST00000542199 LGI1O95970 557 aa6.81□□□□□ -1.32
MRPS35-204ENST00000542199 PNMTP11086 282 aa6.81□□□□□ -1.32
MRPS35-204ENST00000542199 PAX7P23759 505 aa6.81□□□□□ -1.32
MRPS35-204ENST00000542199 HTR2AP28223 471 aa6.81□□□□□ -1.32
MRPS35-204ENST00000542199 STX1BP61266 288 aa6.81□□□□□ -1.32
MRPS35-204ENST00000542199 SCN1BQ07699 218 aa6.81□□□□□ -1.32
MRPS35-204ENST00000542199 SQLEQ14534 574 aa6.81□□□□□ -1.32
MRPS35-204ENST00000542199 RAB35Q15286 201 aa6.81□□□□□ -1.32
MRPS35-204ENST00000542199 NPTX1Q15818 432 aa6.81□□□□□ -1.32
MRPS35-204ENST00000542199 PAGE3Q5JUK9 113 aa6.81□□□□□ -1.32
MRPS35-204ENST00000542199 TMEM225Q6GV28 225 aa6.81□□□□□ -1.32
MRPS35-204ENST00000542199 REEP3Q6NUK4 255 aa6.81□□□□□ -1.32
MRPS35-204ENST00000542199 DHRS4L2Q6PKH6 230 aa6.81□□□□□ -1.32
MRPS35-204ENST00000542199 OR1K1Q8NGR3 316 aa6.81□□□□□ -1.32
MRPS35-204ENST00000542199 MAGEE2Q8TD90 523 aaPredicted RBP6.81□□□□□ -1.32
MRPS35-204ENST00000542199 BCL2L2Q92843 193 aaPredicted RBP6.81□□□□□ -1.32
MRPS35-204ENST00000542199 ALKBH3Q96Q83 286 aaPredicted RBP6.81□□□□□ -1.32
MRPS35-204ENST00000542199 CCDC28BQ9BUN5 200 aa6.81□□□□□ -1.32
MRPS35-204ENST00000542199 LINC00470Q9BZP3 86 aa6.81□□□□□ -1.32
MRPS35-204ENST00000542199 IKZF5Q9H5V7 419 aa6.81□□□□□ -1.32
MRPS35-204ENST00000542199 CACYBPQ9HB71 228 aaKnown RBP6.81□□□□□ -1.32
MRPS35-204ENST00000542199 VAPAQ9P0L0 249 aa6.81□□□□□ -1.32
MRPS35-204ENST00000542199 SEC14L4Q9UDX3 406 aa6.81□□□□□ -1.32
MRPS35-204ENST00000542199 CR1P17927 2039 aa6.81□□□□□ -1.32
MRPS35-204ENST00000542199 ARPC4-TTLL3A0A0A6YYG9 625 aa6.8□□□□□ -1.32
MRPS35-204ENST00000542199 LOC102725191A0A1B0GVB3 256 aa6.8□□□□□ -1.32
MRPS35-204ENST00000542199 A0A1B0GWA3 101 aa6.8□□□□□ -1.32
MRPS35-204ENST00000542199 C5orf58C9J3I9 102 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms