RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 RSPO1Q2MKA7 263 aaPredicted RBP13.36□□□□□ -0.27
VAMP1-207ENST00000539047 SNAI3Q3KNW1 292 aa13.36□□□□□ -0.27
VAMP1-207ENST00000539047 GLYATL3Q5SZD4 288 aa13.36□□□□□ -0.27
VAMP1-207ENST00000539047 PGAP1Q75T13 922 aa13.36□□□□□ -0.27
VAMP1-207ENST00000539047 NAA40Q86UY6 237 aa13.36□□□□□ -0.27
VAMP1-207ENST00000539047 SERPINA12Q8IW75 414 aa13.36□□□□□ -0.27
VAMP1-207ENST00000539047 FTMTQ8N4E7 242 aa13.36□□□□□ -0.27
VAMP1-207ENST00000539047 OR51A4Q8NGJ6 313 aa13.36□□□□□ -0.27
VAMP1-207ENST00000539047 OR10AC1Q8NH08 325 aa13.36□□□□□ -0.27
VAMP1-207ENST00000539047 AP3S1Q92572 193 aa13.36□□□□□ -0.27
VAMP1-207ENST00000539047 C10orf35Q96D05 121 aa13.36□□□□□ -0.27
VAMP1-207ENST00000539047 ZNF75AQ96N20 296 aa13.36□□□□□ -0.27
VAMP1-207ENST00000539047 C1QTNF6Q9BXI9 259 aa13.36□□□□□ -0.27
VAMP1-207ENST00000539047 RNF167Q9H6Y7 350 aa13.36□□□□□ -0.27
VAMP1-207ENST00000539047 NDRG3Q9UGV2 375 aa13.36□□□□□ -0.27
VAMP1-207ENST00000539047 TRBV5-7A0A0A0MS05 114 aa13.35□□□□□ -0.27
VAMP1-207ENST00000539047 A0A1W2PPK0 400 aa13.35□□□□□ -0.27
VAMP1-207ENST00000539047 TRIM64BA6NI03 449 aa13.35□□□□□ -0.27
VAMP1-207ENST00000539047 ANXA2P2A6NMY6 339 aa13.35□□□□□ -0.27
VAMP1-207ENST00000539047 IGLV1-44P01699 117 aa13.35□□□□□ -0.27
VAMP1-207ENST00000539047 CRYAAP02489 173 aa13.35□□□□□ -0.27
VAMP1-207ENST00000539047 ERCC1P07992 297 aaPredicted RBP13.35□□□□□ -0.27
VAMP1-207ENST00000539047 CELA3BP08861 270 aa13.35□□□□□ -0.27
VAMP1-207ENST00000539047 CECR9P0C854 216 aa13.35□□□□□ -0.27
VAMP1-207ENST00000539047 ZNF182P17025 639 aaPredicted RBP13.35□□□□□ -0.27
VAMP1-207ENST00000539047 RAB3BP20337 219 aa13.35□□□□□ -0.27
VAMP1-207ENST00000539047 AGAP20933 346 aa13.35□□□□□ -0.27
VAMP1-207ENST00000539047 TUBG1P23258 451 aa13.35□□□□□ -0.27
VAMP1-207ENST00000539047 PCSK6P29122 969 aa13.35□□□□□ -0.27
VAMP1-207ENST00000539047 CCKARP32238 428 aa13.35□□□□□ -0.27
VAMP1-207ENST00000539047 TGFBR1P36897 503 aa13.35□□□□□ -0.27
VAMP1-207ENST00000539047 RAD52P43351 418 aa13.35□□□□□ -0.27
VAMP1-207ENST00000539047 RANBP1P43487 201 aa13.35□□□□□ -0.27
VAMP1-207ENST00000539047 PSMD7P51665 324 aa13.35□□□□□ -0.27
VAMP1-207ENST00000539047 SORDQ00796 357 aa13.35□□□□□ -0.27
VAMP1-207ENST00000539047 HGFACQ04756 655 aa13.35□□□□□ -0.27
VAMP1-207ENST00000539047 IGFBP7Q16270 282 aa13.35□□□□□ -0.27
VAMP1-207ENST00000539047 XKRXQ6PP77 449 aa13.35□□□□□ -0.27
VAMP1-207ENST00000539047 TMEM108Q6UXF1 575 aa13.35□□□□□ -0.27
VAMP1-207ENST00000539047 COLCA1Q6ZS62 124 aa13.35□□□□□ -0.27
VAMP1-207ENST00000539047 ZNF808Q8N4W9 903 aaPredicted RBP13.35□□□□□ -0.27
VAMP1-207ENST00000539047 SEMA6DQ8NFY4 1073 aa13.35□□□□□ -0.27
VAMP1-207ENST00000539047 OR5D14Q8NGL3 314 aa13.35□□□□□ -0.27
VAMP1-207ENST00000539047 DYNC2LI1Q8TCX1 351 aa13.35□□□□□ -0.27
VAMP1-207ENST00000539047 BCL2L14Q9BZR8 327 aa13.35□□□□□ -0.27
VAMP1-207ENST00000539047 TPK1Q9H3S4 243 aa13.35□□□□□ -0.27
VAMP1-207ENST00000539047 TUBG2Q9NRH3 451 aa13.35□□□□□ -0.27
VAMP1-207ENST00000539047 ZNF275Q9NSD4 429 aaPredicted RBP13.35□□□□□ -0.27
VAMP1-207ENST00000539047 FOXJ3Q9UPW0 622 aa13.35□□□□□ -0.27
VAMP1-207ENST00000539047 ESPL1Q14674 2120 aa13.34□□□□□ -0.27
VAMP1-207ENST00000539047 MYO7BQ6PIF6 2116 aa13.34□□□□□ -0.27
VAMP1-207ENST00000539047 RP1L1Q8IWN7 2480 aaPredicted RBP13.34□□□□□ -0.27
VAMP1-207ENST00000539047 IGHV1-18A0A0C4DH31 117 aa13.34□□□□□ -0.27
VAMP1-207ENST00000539047 A0A1B0GTI1 187 aa13.34□□□□□ -0.27
VAMP1-207ENST00000539047 MEGF11A6BM72 1044 aa13.34□□□□□ -0.27
VAMP1-207ENST00000539047 GGT3PA6NGU5 568 aa13.34□□□□□ -0.27
VAMP1-207ENST00000539047 SRMP19623 302 aa13.34□□□□□ -0.27
VAMP1-207ENST00000539047 THBS4P35443 961 aa13.34□□□□□ -0.27
VAMP1-207ENST00000539047 RIPPLY1Q0D2K3 151 aa13.34□□□□□ -0.27
VAMP1-207ENST00000539047 HNRNPA0Q13151 305 aaKnown RBP13.34□□□□□ -0.27
VAMP1-207ENST00000539047 FAM27D1Q5T7N8 215 aa13.34□□□□□ -0.27
VAMP1-207ENST00000539047 WFDC8Q8IUA0 241 aa13.34□□□□□ -0.27
VAMP1-207ENST00000539047 NKAIN3Q8N8D7 197 aa13.34□□□□□ -0.27
VAMP1-207ENST00000539047 OR2AE1Q8NHA4 323 aa13.34□□□□□ -0.27
VAMP1-207ENST00000539047 PP6455Q8WZ26 134 aa13.34□□□□□ -0.27
VAMP1-207ENST00000539047 SGK3Q96BR1 496 aa13.34□□□□□ -0.27
VAMP1-207ENST00000539047 FGGYQ96C11 551 aa13.34□□□□□ -0.27
VAMP1-207ENST00000539047 CPNE2Q96FN4 548 aaPredicted RBP13.34□□□□□ -0.27
VAMP1-207ENST00000539047 PTTG3PQ9NZH4 202 aa13.34□□□□□ -0.27
VAMP1-207ENST00000539047 ZNF319Q9P2F9 582 aa13.34□□□□□ -0.27
VAMP1-207ENST00000539047 PIGLQ9Y2B2 252 aa13.34□□□□□ -0.27
VAMP1-207ENST00000539047 V9GYS6 101 aa13.34□□□□□ -0.27
VAMP1-207ENST00000539047 FLNCQ14315 2725 aa13.34□□□□□ -0.27
VAMP1-207ENST00000539047 HECTD1Q9ULT8 2610 aa13.33□□□□□ -0.28
VAMP1-207ENST00000539047 NKX2-6A6NCS4 301 aa13.33□□□□□ -0.28
VAMP1-207ENST00000539047 MAGEB3O15480 346 aa13.33□□□□□ -0.28
VAMP1-207ENST00000539047 ICMTO60725 284 aa13.33□□□□□ -0.28
VAMP1-207ENST00000539047 SMPD2O60906 423 aa13.33□□□□□ -0.28
VAMP1-207ENST00000539047 IGLV3-1P01715 115 aa13.33□□□□□ -0.28
VAMP1-207ENST00000539047 SELEP16581 610 aa13.33□□□□□ -0.28
VAMP1-207ENST00000539047 RAB3AP20336 220 aa13.33□□□□□ -0.28
VAMP1-207ENST00000539047 PEX19P40855 299 aa13.33□□□□□ -0.28
VAMP1-207ENST00000539047 PPP1CBP62140 327 aa13.33□□□□□ -0.28
VAMP1-207ENST00000539047 RPS23P62266 143 aaKnown RBP13.33□□□□□ -0.28
VAMP1-207ENST00000539047 NAAAQ02083 359 aa13.33□□□□□ -0.28
VAMP1-207ENST00000539047 ZBTB37Q5TC79 503 aa13.33□□□□□ -0.28
VAMP1-207ENST00000539047 PARP16Q8N5Y8 322 aa13.33□□□□□ -0.28
VAMP1-207ENST00000539047 PLPP7Q8NBV4 271 aa13.33□□□□□ -0.28
VAMP1-207ENST00000539047 CSNK2A3Q8NEV1 391 aa13.33□□□□□ -0.28
VAMP1-207ENST00000539047 SPSB4Q96A44 273 aa13.33□□□□□ -0.28
VAMP1-207ENST00000539047 SLC25A46Q96AG3 418 aa13.33□□□□□ -0.28
VAMP1-207ENST00000539047 ZC3HAV1LQ96H79 300 aaKnown RBP13.33□□□□□ -0.28
VAMP1-207ENST00000539047 OR51B6Q9H340 312 aa13.33□□□□□ -0.28
VAMP1-207ENST00000539047 TAS2R4Q9NYW5 299 aa13.33□□□□□ -0.28
VAMP1-207ENST00000539047 UBR5O95071 2799 aaPredicted RBP13.32□□□□□ -0.28
VAMP1-207ENST00000539047 IGHV2OR16-5A0A0B4J2B6 119 aa13.32□□□□□ -0.28
VAMP1-207ENST00000539047 hCG_38984A0A1B0GV85 526 aa13.32□□□□□ -0.28
VAMP1-207ENST00000539047 TMEM127O75204 238 aa13.32□□□□□ -0.28
VAMP1-207ENST00000539047 CLDN14O95500 239 aa13.32□□□□□ -0.28
VAMP1-207ENST00000539047 FAM157BP0CG42 384 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms