RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 TRAPPC6BQ86SZ2 158 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 ZNF101Q8IZC7 436 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 BPIFB2Q8N4F0 458 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 PIP4P2Q8N4L2 257 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 STEAP2Q8NFT2 490 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 BEST4Q8NFU0 473 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 OR52N4Q8NGI2 321 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 OR51S1Q8NGJ8 323 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 OR10R2Q8NGX6 335 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 OR2V1Q8NHB1 315 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 CPT1CQ8TCG5 803 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 TNFAIP8L1Q8WVP5 186 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 SNAPC3Q92966 411 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 NABP1Q96AH0 204 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 TMEM45BQ96B21 275 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 ZNF799Q96GE5 643 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 FAHD2AQ96GK7 314 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 FAM71F1Q96KD3 344 aaPredicted RBP5.85□□□□□ -1.47
USP28-206ENST00000538224 OR2A7Q96R45 310 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 GPER1Q99527 375 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 S100A13Q99584 98 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 FAM173AQ9BQD7 235 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 SEC22CQ9BRL7 303 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 RBM24Q9BX46 236 aaKnown RBP5.85□□□□□ -1.47
USP28-206ENST00000538224 TMEM59Q9BXS4 323 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 P4HTMQ9NXG6 502 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 B3GNT2Q9NY97 397 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 ATPIF1Q9UII2 106 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 FLVCR2Q9UPI3 526 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 BOLA1Q9Y3E2 137 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 V9GYS6 101 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 NCKAP5O14513 1909 aa5.85□□□□□ -1.47
USP28-206ENST00000538224 PCSK5Q92824 1860 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 LOC101059948A0A1B0GTJ6 334 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 LNP1A1A4G5 178 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 TMEM235A6NFC5 223 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 LRRC3CA6NJW4 275 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 HMSDA8MTL9 139 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 SMLR1H3BR10 107 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 RAB27BO00194 218 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 RER1O15258 196 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 SGCEO43556 437 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 LMX1BO60663 402 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 CYTIPO60759 359 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 RAMP1O60894 148 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 CA11O75493 328 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 FARS2O95363 451 aaKnown RBP5.84□□□□□ -1.47
USP28-206ENST00000538224 IFNA6P05013 189 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 PTHLHP12272 177 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 GDF1P27539 372 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 HTR2BP41595 481 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 SLC6A9P48067 706 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 ZNF81P51508 661 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 PER3P56645 1201 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 TSPAN5P62079 268 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 FOXK1P85037 733 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 OC90Q02509 493 aaPredicted RBP5.84□□□□□ -1.47
USP28-206ENST00000538224 AIMP2Q13155 320 aaKnown RBP5.84□□□□□ -1.47
USP28-206ENST00000538224 MFAP5Q13361 173 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 UNC119Q13432 240 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 CNN3Q15417 329 aaKnown RBP5.84□□□□□ -1.47
USP28-206ENST00000538224 C4orf46Q504U0 113 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 Q5BKY6 102 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 FAAP20Q6NZ36 180 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 C11orf88Q6PI97 169 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 GLIPR1L1Q6UWM5 242 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 IDO2Q6ZQW0 420 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 NLRC3Q7RTR2 1065 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 BIVMQ86UB2 503 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 GGNQ86UU5 652 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 NAA40Q86UY6 237 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 FJX1Q86VR8 437 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 ANGPTL5Q86XS5 388 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 OR5AS1Q8N127 324 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 FTMTQ8N4E7 242 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 ARRDC1Q8N5I2 433 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 UXS1Q8NBZ7 420 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 ACBD4Q8NC06 268 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 CHST4Q8NCG5 386 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 OR2AK2Q8NG84 335 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 OR8H1Q8NGG4 311 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 OR14K1Q8NGZ2 314 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 NKD1Q969G9 470 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 SPSB1Q96BD6 273 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 RAB3CQ96E17 227 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 SCGB3A2Q96PL1 93 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 TECTBQ96PL2 329 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 ZNF385AQ96PM9 386 aaKnown RBP5.84□□□□□ -1.47
USP28-206ENST00000538224 EDEM2Q9BV94 578 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 SRXN1Q9BYN0 137 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 SPRY4Q9C004 299 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 CHST5Q9GZS9 411 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 KCNK15Q9H427 330 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 RGCCQ9H4X1 137 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 BEX1Q9HBH7 125 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.84□□□□□ -1.47
USP28-206ENST00000538224 TMEM38BQ9NVV0 291 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 PLEK2Q9NYT0 353 aa5.84□□□□□ -1.47
USP28-206ENST00000538224 EIF3KQ9UBQ5 218 aaKnown RBP5.84□□□□□ -1.47
USP28-206ENST00000538224 UBQLN2Q9UHD9 624 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms