RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 CA5BP1Q8WTZ4 195 aa13.32□□□□□ -0.28
PCDHA9-202ENST00000532602 ZNF2Q9BSG1 426 aaPredicted RBP13.32□□□□□ -0.28
PCDHA9-202ENST00000532602 ST8SIA5O15466 376 aa13.32□□□□□ -0.28
PCDHA9-202ENST00000532602 F2RP25116 425 aa13.32□□□□□ -0.28
PCDHA9-202ENST00000532602 SLC25A26Q70HW3 274 aa13.32□□□□□ -0.28
PCDHA9-202ENST00000532602 LRRC3BQ96PB8 259 aa13.32□□□□□ -0.28
PCDHA9-202ENST00000532602 ALKBH3Q96Q83 286 aaPredicted RBP13.32□□□□□ -0.28
PCDHA9-202ENST00000532602 FAM60AQ9NP50 221 aa13.32□□□□□ -0.28
PCDHA9-202ENST00000532602 NDUFB3O43676 98 aa13.32□□□□□ -0.28
PCDHA9-202ENST00000532602 TRAF3IP2O43734 574 aaPredicted RBP13.32□□□□□ -0.28
PCDHA9-202ENST00000532602 GPANK1O95872 356 aa13.32□□□□□ -0.28
PCDHA9-202ENST00000532602 CD160O95971 181 aa13.32□□□□□ -0.28
PCDHA9-202ENST00000532602 NME2P22392 152 aa13.32□□□□□ -0.28
PCDHA9-202ENST00000532602 ISL1P61371 349 aa13.32□□□□□ -0.28
PCDHA9-202ENST00000532602 UBE2G1P62253 170 aa13.32□□□□□ -0.28
PCDHA9-202ENST00000532602 SIGLEC14Q08ET2 396 aa13.32□□□□□ -0.28
PCDHA9-202ENST00000532602 AKR7LQ8NHP1 331 aa13.32□□□□□ -0.28
PCDHA9-202ENST00000532602 SEC22CQ9BRL7 303 aa13.32□□□□□ -0.28
PCDHA9-202ENST00000532602 PUS1Q9Y606 427 aaKnown RBP eCLIP13.32□□□□□ -0.28
PCDHA9-202ENST00000532602 TRGV10A0A0A0MS01 117 aa13.31□□□□□ -0.28
PCDHA9-202ENST00000532602 EPOPA6NHQ4 379 aa13.31□□□□□ -0.28
PCDHA9-202ENST00000532602 ARPC3O15145 178 aa13.31□□□□□ -0.28
PCDHA9-202ENST00000532602 FUT6P51993 359 aa13.31□□□□□ -0.28
PCDHA9-202ENST00000532602 SMIM19Q96E16 107 aa13.31□□□□□ -0.28
PCDHA9-202ENST00000532602 CIB3Q96Q77 187 aaPredicted RBP13.31□□□□□ -0.28
PCDHA9-202ENST00000532602 NIPSNAP3BQ9BS92 247 aa13.31□□□□□ -0.28
PCDHA9-202ENST00000532602 ZFP64Q9NPA5 681 aa13.31□□□□□ -0.28
PCDHA9-202ENST00000532602 NDUFB11Q9NX14 153 aa13.31□□□□□ -0.28
PCDHA9-202ENST00000532602 BRWD1Q9NSI6 2320 aa13.31□□□□□ -0.28
PCDHA9-202ENST00000532602 TEX51A0A1B0GUA7 166 aa13.31□□□□□ -0.28
PCDHA9-202ENST00000532602 RAB19A4D1S5 217 aa13.31□□□□□ -0.28
PCDHA9-202ENST00000532602 AIPO00170 330 aa13.31□□□□□ -0.28
PCDHA9-202ENST00000532602 TMEM127O75204 238 aa13.31□□□□□ -0.28
PCDHA9-202ENST00000532602 THNSL2Q86YJ6 484 aa13.31□□□□□ -0.28
PCDHA9-202ENST00000532602 LFNGQ8NES3 379 aa13.31□□□□□ -0.28
PCDHA9-202ENST00000532602 PP6455Q8WZ26 134 aa13.31□□□□□ -0.28
PCDHA9-202ENST00000532602 SLC25A46Q96AG3 418 aa13.31□□□□□ -0.28
PCDHA9-202ENST00000532602 B9D1Q9UPM9 204 aa13.31□□□□□ -0.28
PCDHA9-202ENST00000532602 RPS10-NUDT3A0A1W2PQS6 291 aa13.31□□□□□ -0.28
PCDHA9-202ENST00000532602 CD1EP15812 388 aa13.31□□□□□ -0.28
PCDHA9-202ENST00000532602 RPS10P46783 165 aaKnown RBP13.31□□□□□ -0.28
PCDHA9-202ENST00000532602 MPPED2Q15777 294 aa13.31□□□□□ -0.28
PCDHA9-202ENST00000532602 LINC00299Q6ZSB3 139 aa13.31□□□□□ -0.28
PCDHA9-202ENST00000532602 Q8IYB0 196 aa13.31□□□□□ -0.28
PCDHA9-202ENST00000532602 TUBG2Q9NRH3 451 aa13.31□□□□□ -0.28
PCDHA9-202ENST00000532602 TNS1Q9HBL0 1735 aaKnown RBP13.31□□□□□ -0.28
PCDHA9-202ENST00000532602 FAM221AA4D161 298 aa13.31□□□□□ -0.28
PCDHA9-202ENST00000532602 ISG20L2Q9H9L3 353 aaKnown RBP13.31□□□□□ -0.28
PCDHA9-202ENST00000532602 SCN4AP35499 1836 aa13.31□□□□□ -0.28
PCDHA9-202ENST00000532602 HOXD11P31277 338 aaPredicted RBP13.31□□□□□ -0.28
PCDHA9-202ENST00000532602 TESK1Q15569 626 aa13.31□□□□□ -0.28
PCDHA9-202ENST00000532602 CLPPQ16740 277 aaPredicted RBP13.31□□□□□ -0.28
PCDHA9-202ENST00000532602 ORAI1Q96D31 301 aa13.31□□□□□ -0.28
PCDHA9-202ENST00000532602 TCEAL7Q9BRU2 100 aa13.31□□□□□ -0.28
PCDHA9-202ENST00000532602 TPPP3Q9BW30 176 aa13.31□□□□□ -0.28
PCDHA9-202ENST00000532602 IGLV3-16A0A075B6K0 115 aa13.3□□□□□ -0.28
PCDHA9-202ENST00000532602 EML2O95834 649 aa13.3□□□□□ -0.28
PCDHA9-202ENST00000532602 ALKAL2Q6UX46 152 aa13.3□□□□□ -0.28
PCDHA9-202ENST00000532602 ZNF391Q9UJN7 358 aa13.3□□□□□ -0.28
PCDHA9-202ENST00000532602 SLC22A13Q9Y226 551 aa13.3□□□□□ -0.28
PCDHA9-202ENST00000532602 SLC35A2P78381 396 aa13.3□□□□□ -0.28
PCDHA9-202ENST00000532602 CDK5R1Q15078 307 aa13.3□□□□□ -0.28
PCDHA9-202ENST00000532602 TAF9Q16594 264 aa13.3□□□□□ -0.28
PCDHA9-202ENST00000532602 NKX2-2O95096 273 aa13.3□□□□□ -0.28
PCDHA9-202ENST00000532602 CRYBA1P05813 215 aa13.3□□□□□ -0.28
PCDHA9-202ENST00000532602 MGST1P10620 155 aaKnown RBP13.3□□□□□ -0.28
PCDHA9-202ENST00000532602 SOX18P35713 384 aa13.3□□□□□ -0.28
PCDHA9-202ENST00000532602 RAB1AP62820 205 aa13.3□□□□□ -0.28
PCDHA9-202ENST00000532602 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.3□□□□□ -0.28
PCDHA9-202ENST00000532602 CT55Q8WUE5 264 aa13.3□□□□□ -0.28
PCDHA9-202ENST00000532602 NDFIP1Q9BT67 221 aa13.3□□□□□ -0.28
PCDHA9-202ENST00000532602 C11orf54Q9H0W9 315 aaPredicted RBP13.3□□□□□ -0.28
PCDHA9-202ENST00000532602 RANGRFQ9HD47 186 aaPredicted RBP13.3□□□□□ -0.28
PCDHA9-202ENST00000532602 RNF24Q9Y225 148 aa13.3□□□□□ -0.28
PCDHA9-202ENST00000532602 A0A1B0GVG6 124 aa13.3□□□□□ -0.28
PCDHA9-202ENST00000532602 SH2D7A6NKC9 451 aaPredicted RBP13.3□□□□□ -0.28
PCDHA9-202ENST00000532602 FAM90A27PA6NNH2 459 aa13.3□□□□□ -0.28
PCDHA9-202ENST00000532602 SPINK14Q6IE38 97 aa13.3□□□□□ -0.28
PCDHA9-202ENST00000532602 KDF1Q8NAX2 398 aaPredicted RBP13.3□□□□□ -0.28
PCDHA9-202ENST00000532602 PPP1R3CQ9UQK1 317 aa13.3□□□□□ -0.28
PCDHA9-202ENST00000532602 TDRD15B5MCY1 1934 aaKnown RBP13.3□□□□□ -0.28
PCDHA9-202ENST00000532602 SPAARA0A1B0GVQ0 90 aa13.3□□□□□ -0.28
PCDHA9-202ENST00000532602 CCL4P13236 92 aa13.3□□□□□ -0.28
PCDHA9-202ENST00000532602 TGFBR1P36897 503 aa13.3□□□□□ -0.28
PCDHA9-202ENST00000532602 BTG1P62324 171 aa13.3□□□□□ -0.28
PCDHA9-202ENST00000532602 FLI1Q01543 452 aaPredicted RBP13.3□□□□□ -0.28
PCDHA9-202ENST00000532602 ZNF225Q9UK10 706 aa13.3□□□□□ -0.28
PCDHA9-202ENST00000532602 A0A0B4J203 849 aa13.29□□□□□ -0.28
PCDHA9-202ENST00000532602 S100A11P31949 105 aa13.29□□□□□ -0.28
PCDHA9-202ENST00000532602 THBS4P35443 961 aa13.29□□□□□ -0.28
PCDHA9-202ENST00000532602 ZNF117Q03924 483 aa13.29□□□□□ -0.28
PCDHA9-202ENST00000532602 COX14Q96I36 57 aa13.29□□□□□ -0.28
PCDHA9-202ENST00000532602 SPINT1O43278 529 aa13.29□□□□□ -0.28
PCDHA9-202ENST00000532602 HOXD12P35452 270 aa13.29□□□□□ -0.28
PCDHA9-202ENST00000532602 RPS19P39019 145 aaKnown RBP13.29□□□□□ -0.28
PCDHA9-202ENST00000532602 OR1F12Q8NHA8 337 aa13.29□□□□□ -0.28
PCDHA9-202ENST00000532602 POFUT1Q9H488 388 aa13.29□□□□□ -0.28
PCDHA9-202ENST00000532602 NARFLQ9H6Q4 476 aa13.29□□□□□ -0.28
PCDHA9-202ENST00000532602 MYOZ1Q9NP98 299 aaPredicted RBP13.29□□□□□ -0.28
PCDHA9-202ENST00000532602 MOSPD3O75425 235 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms