RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 A0A1B0GVI7 797 aa19■□□□□ 0.63
PACSIN3-209ENST00000532457 OR5H1A6NKK0 313 aa19■□□□□ 0.63
PACSIN3-209ENST00000532457 CTDSP2O14595 271 aa19■□□□□ 0.63
PACSIN3-209ENST00000532457 NGFP01138 241 aa19■□□□□ 0.63
PACSIN3-209ENST00000532457 CBR1P16152 277 aa19■□□□□ 0.63
PACSIN3-209ENST00000532457 IGFBP3P17936 291 aaPredicted RBP19■□□□□ 0.63
PACSIN3-209ENST00000532457 RAB3BP20337 219 aa19■□□□□ 0.63
PACSIN3-209ENST00000532457 SOX6P35712 828 aa19■□□□□ 0.63
PACSIN3-209ENST00000532457 WNT5AP41221 380 aa19■□□□□ 0.63
PACSIN3-209ENST00000532457 GLYATL3Q5SZD4 288 aa19■□□□□ 0.63
PACSIN3-209ENST00000532457 COMMD2Q86X83 199 aa19■□□□□ 0.63
PACSIN3-209ENST00000532457 OR52H1Q8NGJ2 320 aa19■□□□□ 0.63
PACSIN3-209ENST00000532457 LILRB4Q8NHJ6 448 aa19■□□□□ 0.63
PACSIN3-209ENST00000532457 ZFAND2BQ8WV99 257 aa19■□□□□ 0.63
PACSIN3-209ENST00000532457 S100PBPQ96BU1 408 aa19■□□□□ 0.63
PACSIN3-209ENST00000532457 OR10A2Q9H208 303 aa19■□□□□ 0.63
PACSIN3-209ENST00000532457 ZCCHC4Q9H5U6 513 aa19■□□□□ 0.63
PACSIN3-209ENST00000532457 TAS2R4Q9NYW5 299 aa19■□□□□ 0.63
PACSIN3-209ENST00000532457 SLC2A2P11168 524 aaPredicted RBP19■□□□□ 0.63
PACSIN3-209ENST00000532457 EPXP11678 715 aa19■□□□□ 0.63
PACSIN3-209ENST00000532457 IDH3GP51553 393 aaPredicted RBP19■□□□□ 0.63
PACSIN3-209ENST00000532457 TNK1Q13470 666 aa19■□□□□ 0.63
PACSIN3-209ENST00000532457 Q6ZSR3 168 aa19■□□□□ 0.63
PACSIN3-209ENST00000532457 SLC30A7Q8NEW0 376 aa19■□□□□ 0.63
PACSIN3-209ENST00000532457 OR6Q1Q8NGQ2 317 aa19■□□□□ 0.63
PACSIN3-209ENST00000532457 MMP27Q9H306 513 aa19■□□□□ 0.63
PACSIN3-209ENST00000532457 SLC25A15Q9Y619 301 aa19■□□□□ 0.63
PACSIN3-209ENST00000532457 HELZ2Q9BYK8 2649 aaKnown RBP18.99■□□□□ 0.63
PACSIN3-209ENST00000532457 MAS1P04201 325 aa18.99■□□□□ 0.63
PACSIN3-209ENST00000532457 PSMB1P20618 241 aaKnown RBP18.99■□□□□ 0.63
PACSIN3-209ENST00000532457 ZNF92Q03936 586 aa18.99■□□□□ 0.63
PACSIN3-209ENST00000532457 DOK3Q7L591 496 aa18.99■□□□□ 0.63
PACSIN3-209ENST00000532457 C17orf78Q8N4C9 275 aa18.99■□□□□ 0.63
PACSIN3-209ENST00000532457 PARP16Q8N5Y8 322 aa18.99■□□□□ 0.63
PACSIN3-209ENST00000532457 DNAAF1Q8NEP3 725 aa18.99■□□□□ 0.63
PACSIN3-209ENST00000532457 OR51A2Q8NGJ7 313 aa18.99■□□□□ 0.63
PACSIN3-209ENST00000532457 ITLN2Q8WWU7 325 aaPredicted RBP18.99■□□□□ 0.63
PACSIN3-209ENST00000532457 TCF7L1Q9HCS4 588 aa18.99■□□□□ 0.63
PACSIN3-209ENST00000532457 STARD10Q9Y365 291 aa18.99■□□□□ 0.63
PACSIN3-209ENST00000532457 WIPF3A6NGB9 483 aa18.98■□□□□ 0.63
PACSIN3-209ENST00000532457 IGKV3-15P01624 115 aa18.98■□□□□ 0.63
PACSIN3-209ENST00000532457 APLNRP35414 380 aa18.98■□□□□ 0.63
PACSIN3-209ENST00000532457 THBS2P35442 1172 aa18.98■□□□□ 0.63
PACSIN3-209ENST00000532457 ZNF101Q8IZC7 436 aa18.98■□□□□ 0.63
PACSIN3-209ENST00000532457 LRRC46Q96FV0 321 aa18.98■□□□□ 0.63
PACSIN3-209ENST00000532457 REEP6Q96HR9 211 aa18.98■□□□□ 0.63
PACSIN3-209ENST00000532457 C6orf62Q9GZU0 229 aaPredicted RBP18.98■□□□□ 0.63
PACSIN3-209ENST00000532457 POFUT1Q9H488 388 aa18.98■□□□□ 0.63
PACSIN3-209ENST00000532457 A3GALT2U3KPV4 340 aa18.98■□□□□ 0.63
PACSIN3-209ENST00000532457 V9GYS6 101 aa18.98■□□□□ 0.63
PACSIN3-209ENST00000532457 A0A075B6Q4 140 aa18.97■□□□□ 0.63
PACSIN3-209ENST00000532457 CLDN14O95500 239 aa18.97■□□□□ 0.63
PACSIN3-209ENST00000532457 IL32P24001 234 aa18.97■□□□□ 0.63
PACSIN3-209ENST00000532457 SFXN4Q6P4A7 337 aa18.97■□□□□ 0.63
PACSIN3-209ENST00000532457 SSC4DQ8WTU2 575 aa18.97■□□□□ 0.63
PACSIN3-209ENST00000532457 NKX3-1Q99801 234 aaPredicted RBP18.97■□□□□ 0.63
PACSIN3-209ENST00000532457 KCNJ16Q9NPI9 418 aa18.97■□□□□ 0.63
PACSIN3-209ENST00000532457 TENM4Q6N022 2769 aa18.97■□□□□ 0.63
PACSIN3-209ENST00000532457 CD2P06729 351 aa18.97■□□□□ 0.63
PACSIN3-209ENST00000532457 INHBBP09529 407 aa18.97■□□□□ 0.63
PACSIN3-209ENST00000532457 ATF1P18846 271 aa18.97■□□□□ 0.63
PACSIN3-209ENST00000532457 ACKR3P25106 362 aa18.97■□□□□ 0.63
PACSIN3-209ENST00000532457 IDNKQ5T6J7 187 aa18.97■□□□□ 0.63
PACSIN3-209ENST00000532457 A0A0B4J203 849 aa18.96■□□□□ 0.63
PACSIN3-209ENST00000532457 CCKARP32238 428 aa18.96■□□□□ 0.63
PACSIN3-209ENST00000532457 DDOSTP39656 456 aa18.96■□□□□ 0.63
PACSIN3-209ENST00000532457 SPSB4Q96A44 273 aa18.96■□□□□ 0.63
PACSIN3-209ENST00000532457 DAPK2Q9UIK4 370 aa18.96■□□□□ 0.63
PACSIN3-209ENST00000532457 FOXJ3Q9UPW0 622 aa18.96■□□□□ 0.63
PACSIN3-209ENST00000532457 NOTOA8MTQ0 251 aa18.95■□□□□ 0.62
PACSIN3-209ENST00000532457 DHRS3O75911 302 aa18.95■□□□□ 0.62
PACSIN3-209ENST00000532457 FSTP19883 344 aa18.95■□□□□ 0.62
PACSIN3-209ENST00000532457 HOXC12P31275 282 aa18.95■□□□□ 0.62
PACSIN3-209ENST00000532457 FAM3AP98173 230 aa18.95■□□□□ 0.62
PACSIN3-209ENST00000532457 DMRTC1Q5HYR2 192 aa18.95■□□□□ 0.62
PACSIN3-209ENST00000532457 TIMM23BQ5SRD1 257 aa18.95■□□□□ 0.62
PACSIN3-209ENST00000532457 ZNF529Q6P280 563 aa18.95■□□□□ 0.62
PACSIN3-209ENST00000532457 RNF144BQ7Z419 303 aa18.95■□□□□ 0.62
PACSIN3-209ENST00000532457 SERPINA12Q8IW75 414 aa18.95■□□□□ 0.62
PACSIN3-209ENST00000532457 THRSPQ92748 146 aa18.95■□□□□ 0.62
PACSIN3-209ENST00000532457 ACTR6Q9GZN1 396 aa18.95■□□□□ 0.62
PACSIN3-209ENST00000532457 OR51B6Q9H340 312 aa18.95■□□□□ 0.62
PACSIN3-209ENST00000532457 SP140LQ9H930 580 aa18.95■□□□□ 0.62
PACSIN3-209ENST00000532457 SMURF1Q9HCE7 757 aa18.95■□□□□ 0.62
PACSIN3-209ENST00000532457 USP9XQ93008 2570 aaPredicted RBP18.95■□□□□ 0.62
PACSIN3-209ENST00000532457 COL12A1Q99715 3063 aa18.95■□□□□ 0.62
PACSIN3-209ENST00000532457 CLEC18AA5D8T8 446 aa18.95■□□□□ 0.62
PACSIN3-209ENST00000532457 FAM90A27PA6NNH2 459 aa18.95■□□□□ 0.62
PACSIN3-209ENST00000532457 IGLV1-44P01699 117 aa18.95■□□□□ 0.62
PACSIN3-209ENST00000532457 GNALP38405 381 aa18.95■□□□□ 0.62
PACSIN3-209ENST00000532457 ASCL1P50553 236 aa18.95■□□□□ 0.62
PACSIN3-209ENST00000532457 SRSF1Q07955 248 aaKnown RBP eCLIP18.95■□□□□ 0.627e-7■□□□□ 10.4
PACSIN3-209ENST00000532457 SPOCK1Q08629 439 aa18.95■□□□□ 0.62
PACSIN3-209ENST00000532457 HLXQ14774 488 aaPredicted RBP18.95■□□□□ 0.62
PACSIN3-209ENST00000532457 TAB1Q15750 504 aa18.95■□□□□ 0.62
PACSIN3-209ENST00000532457 CLEC18BQ6UXF7 455 aa18.95■□□□□ 0.62
PACSIN3-209ENST00000532457 CLEC18CQ8NCF0 446 aa18.95■□□□□ 0.62
PACSIN3-209ENST00000532457 APOBEC3DQ96AK3 386 aaPredicted RBP18.95■□□□□ 0.62
PACSIN3-209ENST00000532457 MIXL1Q9H2W2 232 aa18.95■□□□□ 0.62
PACSIN3-209ENST00000532457 PPP1R3EQ9H7J1 279 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms