RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 FLVCR2Q9UPI3 526 aa3.28□□□□□ -1.88
CLNS1A-209ENST00000527299 AMDHD2Q9Y303 409 aa3.28□□□□□ -1.88
CLNS1A-209ENST00000527299 MIA3Q5JRA6 1907 aa3.28□□□□□ -1.88
CLNS1A-209ENST00000527299 ALPK3Q96L96 1907 aa3.28□□□□□ -1.88
CLNS1A-209ENST00000527299 BRCA1P38398 1863 aaKnown RBP3.28□□□□□ -1.88
CLNS1A-209ENST00000527299 COL14A1Q05707 1796 aaKnown RBP3.28□□□□□ -1.89
CLNS1A-209ENST00000527299 STRCQ7RTU9 1775 aa3.28□□□□□ -1.89
CLNS1A-209ENST00000527299 TRPM7Q96QT4 1865 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 PPIAL4EA0A075B759 164 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 A0A087WV62 115 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 A0A096LPK6 155 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 NPIPA5A0A0B4J1W7 369 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 TRAV25A0A0B4J276 109 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 PPIAL4CA0A0B4J2A2 164 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 EDDM13A0A1B0GTR0 161 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 TRDV1A0A1B0GX56 115 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 FAM230AA0A1W2PPH8 454 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 NKX2-6A6NCS4 301 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 TVP23AA6NH52 213 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 PRSS29PA6NIE9 313 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 C3orf70A6NLC5 250 aaPredicted RBP3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 VSTM2BA6NLU5 285 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 OR2AG2A6NM03 316 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 ZNF705GA8MUZ8 300 aaPredicted RBP3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 NPIPA5E9PKD4 350 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 PPIAL4DF5H284 164 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 NPIPA3F8WFD2 350 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 G3V4G9 280 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 H3BN98 237 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 F2RL2O00254 374 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 GABRPO00591 440 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 TGFB1I1O43294 461 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 EEF1E1O43324 174 aaKnown RBP3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 LANCL1O43813 399 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 CLDN11O75508 207 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 SCGNO76038 276 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 OR2C1O95371 312 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 METTL18O95568 372 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 CH25HO95992 272 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 MT-CO2P00403 227 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 TGFAP01135 160 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 CD8AP01732 235 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 MBPP02686 304 aaPredicted RBP3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 SEMG1P04279 462 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 CHRM4P08173 479 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 MMP2P08253 660 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 OR5G3P0C626 314 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 PPIAL4FP0DN26 164 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 PPIAL4GP0DN37 164 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 OR5H8P0DN80 308 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 TMEM225BP0DP42 221 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 LIPCP11150 499 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 ETFAP13804 333 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 VEGFAP15692 232 aaPredicted RBP3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 CD1DP15813 335 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 GSTM3P21266 225 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 ACHEP22303 614 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 PRKACGP22612 351 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 CXCR1P25024 350 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 DPP4P27487 766 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 PSMB5P28074 263 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 EPHA2P29317 976 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 VIPR2P41587 438 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 GPR12P47775 334 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 ARRB1P49407 418 aaPredicted RBP3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 NPY4RP50391 375 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 RAB9AP51151 201 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 BLKP51451 505 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 ART1P52961 327 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 PNLIPRP1P54315 467 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 GAS1P54826 345 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 CDH12P55289 794 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 BACE1P56817 501 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 MLF1P58340 268 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 RAB11AP62491 216 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 PITPNAQ00169 270 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 CDK5Q00535 292 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 AKR1C1Q04828 323 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 ARHGAP1Q07960 439 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 ITPK1Q13572 414 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 C1DQ13901 141 aaKnown RBP3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 CAPSQ13938 189 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 GPNMBQ14956 572 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 SPHARQ15513 63 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 ZSWIM7Q19AV6 140 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 PGGHGQ32M88 737 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 SNAI3Q3KNW1 292 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 COX19Q49B96 90 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 CTXN3Q4LDR2 81 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 XKR7Q5GH72 579 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 SPANXN3Q5MJ09 141 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 TMEM240Q5SV17 173 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 DCST1Q5T197 706 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 GFI1BQ5VTD9 330 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 SDHAF4Q5VUM1 108 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 OLFML2AQ68BL7 652 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 SFRP4Q6FHJ7 346 aaPredicted RBP3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 OR2T5Q6IEZ7 315 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 FAAP20Q6NZ36 180 aa3.27□□□□□ -1.89
CLNS1A-209ENST00000527299 PGBD2Q6P3X8 592 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms