RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 OR1J2Q8NGS2 313 aa9.01□□□□□ -0.97
MCF2-209ENST00000520602 SCPEP1Q9HB40 452 aa9.01□□□□□ -0.97
MCF2-209ENST00000520602 PTTG3PQ9NZH4 202 aa9.01□□□□□ -0.97
MCF2-209ENST00000520602 LOC102725191A0A1B0GVB3 256 aa9.01□□□□□ -0.97
MCF2-209ENST00000520602 ANGPTL7O43827 346 aa9.01□□□□□ -0.97
MCF2-209ENST00000520602 TTRP02766 147 aa9.01□□□□□ -0.97
MCF2-209ENST00000520602 HOXC12P31275 282 aa9.01□□□□□ -0.97
MCF2-209ENST00000520602 RAC1P63000 192 aa9.01□□□□□ -0.97
MCF2-209ENST00000520602 AKIRIN2Q53H80 203 aa9.01□□□□□ -0.97
MCF2-209ENST00000520602 MRPL21Q7Z2W9 205 aaKnown RBP9.01□□□□□ -0.97
MCF2-209ENST00000520602 COMMD7Q86VX2 200 aa9.01□□□□□ -0.97
MCF2-209ENST00000520602 GTPBP8Q8N3Z3 284 aaPredicted RBP9.01□□□□□ -0.97
MCF2-209ENST00000520602 TAAR9Q96RI9 348 aa9.01□□□□□ -0.97
MCF2-209ENST00000520602 IER2Q9BTL4 223 aa9.01□□□□□ -0.97
MCF2-209ENST00000520602 PAPOLGQ9BWT3 736 aaKnown RBP9.01□□□□□ -0.97
MCF2-209ENST00000520602 C12orf49Q9H741 205 aa9.01□□□□□ -0.97
MCF2-209ENST00000520602 MOB1AQ9H8S9 216 aa9.01□□□□□ -0.97
MCF2-209ENST00000520602 IGHV1-45A0A0A0MS14 117 aa9.01□□□□□ -0.97
MCF2-209ENST00000520602 LOC101059948A0A1B0GTJ6 334 aa9.01□□□□□ -0.97
MCF2-209ENST00000520602 OR7C1O76099 320 aaPredicted RBP9.01□□□□□ -0.97
MCF2-209ENST00000520602 IFNA21P01568 189 aa9.01□□□□□ -0.97
MCF2-209ENST00000520602 CHRM2P08172 466 aa9.01□□□□□ -0.97
MCF2-209ENST00000520602 HOXB5P09067 269 aa9.01□□□□□ -0.97
MCF2-209ENST00000520602 MMP16P51512 607 aa9.01□□□□□ -0.97
MCF2-209ENST00000520602 ZP4Q12836 540 aa9.01□□□□□ -0.97
MCF2-209ENST00000520602 MALLQ13021 153 aa9.01□□□□□ -0.97
MCF2-209ENST00000520602 PCOLCEQ15113 449 aa9.01□□□□□ -0.97
MCF2-209ENST00000520602 DTWD2Q8NBA8 298 aa9.01□□□□□ -0.97
MCF2-209ENST00000520602 BHLHE23Q8NDY6 225 aa9.01□□□□□ -0.97
MCF2-209ENST00000520602 SEMA6DQ8NFY4 1073 aa9.01□□□□□ -0.97
MCF2-209ENST00000520602 OR2AK2Q8NG84 335 aa9.01□□□□□ -0.97
MCF2-209ENST00000520602 TWSG1Q9GZX9 223 aa9.01□□□□□ -0.97
MCF2-209ENST00000520602 GHITMQ9H3K2 345 aa9.01□□□□□ -0.97
MCF2-209ENST00000520602 NELFAQ9H3P2 528 aa9.01□□□□□ -0.97
MCF2-209ENST00000520602 PHF3Q92576 2039 aaKnown RBP9.01□□□□□ -0.97
MCF2-209ENST00000520602 A0A1W2PPC1 479 aa9□□□□□ -0.97
MCF2-209ENST00000520602 AQP7P3A6NL99 342 aa9□□□□□ -0.97
MCF2-209ENST00000520602 NPIPB7O75200 414 aa9□□□□□ -0.97
MCF2-209ENST00000520602 TMEM127O75204 238 aa9□□□□□ -0.97
MCF2-209ENST00000520602 RAD51DO75771 328 aa9□□□□□ -0.97
MCF2-209ENST00000520602 OR3A4PP47883 348 aa9□□□□□ -0.97
MCF2-209ENST00000520602 PER3P56645 1201 aa9□□□□□ -0.97
MCF2-209ENST00000520602 PCBD1P61457 104 aa9□□□□□ -0.97
MCF2-209ENST00000520602 MC2RQ01718 297 aa9□□□□□ -0.97
MCF2-209ENST00000520602 ELFN2Q5R3F8 820 aa9□□□□□ -0.97
MCF2-209ENST00000520602 ZNF441Q8N8Z8 693 aa9□□□□□ -0.97
MCF2-209ENST00000520602 WDSUB1Q8N9V3 476 aa9□□□□□ -0.97
MCF2-209ENST00000520602 BOLLQ8N9W6 283 aaKnown RBP9□□□□□ -0.97
MCF2-209ENST00000520602 ZNF680Q8NEM1 530 aa9□□□□□ -0.97
MCF2-209ENST00000520602 DEFB127Q9H1M4 99 aa9□□□□□ -0.97
MCF2-209ENST00000520602 DLL4Q9NR61 685 aa9□□□□□ -0.97
MCF2-209ENST00000520602 TRBV5-7A0A0A0MS05 114 aa9□□□□□ -0.97
MCF2-209ENST00000520602 A0A0J9YW62 118 aa9□□□□□ -0.97
MCF2-209ENST00000520602 FTCDNL1E5RQL4 147 aa9□□□□□ -0.97
MCF2-209ENST00000520602 OR4E1P0C645 316 aa9□□□□□ -0.97
MCF2-209ENST00000520602 LIFP15018 202 aa9□□□□□ -0.97
MCF2-209ENST00000520602 KLK2P20151 261 aa9□□□□□ -0.97
MCF2-209ENST00000520602 ADH6P28332 368 aa9□□□□□ -0.97
MCF2-209ENST00000520602 AGTR1P30556 359 aa9□□□□□ -0.97
MCF2-209ENST00000520602 GLP1RP43220 463 aa9□□□□□ -0.97
MCF2-209ENST00000520602 HERV-K104P61576 105 aa9□□□□□ -0.97
MCF2-209ENST00000520602 RIPPLY1Q0D2K3 151 aa9□□□□□ -0.97
MCF2-209ENST00000520602 BAMBIQ13145 260 aa9□□□□□ -0.97
MCF2-209ENST00000520602 ZMYND11Q15326 602 aa9□□□□□ -0.97
MCF2-209ENST00000520602 TAF9Q16594 264 aa9□□□□□ -0.97
MCF2-209ENST00000520602 MUC20Q8N307 709 aaPredicted RBP9□□□□□ -0.97
MCF2-209ENST00000520602 ZSCAN1Q8NBB4 408 aa9□□□□□ -0.97
MCF2-209ENST00000520602 OR10R2Q8NGX6 335 aa9□□□□□ -0.97
MCF2-209ENST00000520602 OR10D3Q8NH80 312 aa9□□□□□ -0.97
MCF2-209ENST00000520602 SUN5Q8TC36 379 aa9□□□□□ -0.97
MCF2-209ENST00000520602 M1APQ8TC57 530 aa9□□□□□ -0.97
MCF2-209ENST00000520602 EDEM2Q9BV94 578 aa9□□□□□ -0.97
MCF2-209ENST00000520602 ELF5Q9UKW6 265 aaPredicted RBP9□□□□□ -0.97
MCF2-209ENST00000520602 IGLV3-12A0A075B6K2 115 aa9□□□□□ -0.97
MCF2-209ENST00000520602 MEIKINA0A087WXM9 373 aa9□□□□□ -0.97
MCF2-209ENST00000520602 ARGFXA6NJG6 315 aa9□□□□□ -0.97
MCF2-209ENST00000520602 ZSCAN5BA6NJL1 495 aa9□□□□□ -0.97
MCF2-209ENST00000520602 ICMTO60725 284 aa9□□□□□ -0.97
MCF2-209ENST00000520602 PMS2P2O95744 297 aa9□□□□□ -0.97
MCF2-209ENST00000520602 RLN2P04090 185 aa9□□□□□ -0.97
MCF2-209ENST00000520602 FGL1Q08830 312 aa9□□□□□ -0.97
MCF2-209ENST00000520602 ZNF774Q6NX45 483 aa9□□□□□ -0.97
MCF2-209ENST00000520602 EXD3Q8N9H8 876 aa9□□□□□ -0.97
MCF2-209ENST00000520602 OR2V1Q8NHB1 315 aa9□□□□□ -0.97
MCF2-209ENST00000520602 METTL9Q9H1A3 318 aa9□□□□□ -0.97
MCF2-209ENST00000520602 PPA2Q9H2U2 334 aa9□□□□□ -0.97
MCF2-209ENST00000520602 EMC3Q9P0I2 261 aa9□□□□□ -0.97
MCF2-209ENST00000520602 PCDHGA5Q9Y5G8 931 aa9□□□□□ -0.97
MCF2-209ENST00000520602 MUC22E2RYF6 1773 aaPredicted RBP9□□□□□ -0.97
MCF2-209ENST00000520602 FAM221AA4D161 298 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 HSPB6O14558 160 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 BPNT1O95861 308 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 TGM6O95932 706 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 GIPP09681 153 aaPredicted RBP8.99□□□□□ -0.97
MCF2-209ENST00000520602 GLI4P10075 376 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 IL32P24001 234 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 RAG2P55895 527 aa8.99□□□□□ -0.97
MCF2-209ENST00000520602 CNN3Q15417 329 aaKnown RBP8.99□□□□□ -0.97
MCF2-209ENST00000520602 RSPO4Q2I0M5 234 aaPredicted RBP8.99□□□□□ -0.97
MCF2-209ENST00000520602 NAA40Q86UY6 237 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms