RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 LEG1Q6P5S2 330 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 ZDHHC23Q8IYP9 409 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 BATF2Q8N1L9 274 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 ADPRHL1Q8NDY3 354 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 OR2G2Q8NGZ5 317 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 CCDC32Q9BV29 185 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 OR10A2Q9H208 303 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 NOX3Q9HBY0 568 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 PRODH2Q9UF12 536 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 FOXJ3Q9UPW0 622 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 SLC22A13Q9Y226 551 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 NPTNQ9Y639 398 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 FREM1Q5H8C1 2179 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 TMEM272A0A1B0GTI8 110 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 TVP23AA6NH52 213 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 USP17L23D6RBM5 183 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 PRR23D1E9PI22 279 aaPredicted RBP5.12□□□□□ -1.59
SCLT1-207ENST00000506233 ELANEP08246 267 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 PRR23D2P0DMB1 279 aaPredicted RBP5.12□□□□□ -1.59
SCLT1-207ENST00000506233 LIFP15018 202 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 SRMP19623 302 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 GCSHP23434 173 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 GATA3P23771 443 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 ACY1Q03154 408 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 MADCAM1Q13477 382 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 RNF151Q2KHN1 245 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 ALG10Q5BKT4 473 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 B3GNTL1Q67FW5 361 aaPredicted RBP5.12□□□□□ -1.59
SCLT1-207ENST00000506233 STAC2Q6ZMT1 411 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 PRSS58Q8IYP2 241 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 OR5AS1Q8N127 324 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 CADM2Q8N3J6 435 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 RNF128Q8TEB7 428 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 SLAMF9Q96A28 289 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 R3HDM4Q96D70 268 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 LOXL4Q96JB6 756 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 OR8B4Q96RC9 309 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 HES7Q9BYE0 225 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 GPR61Q9BZJ8 451 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 TBL1XR1Q9BZK7 514 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 ABCG5Q9H222 651 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 SLC6A15Q9H2J7 730 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 TIGARQ9NQ88 270 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 B3GNT2Q9NY97 397 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 PIPOXQ9P0Z9 390 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 ENOPH1Q9UHY7 261 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 KLHL21Q9UJP4 597 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 BAIAP2Q9UQB8 552 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 RASD1Q9Y272 281 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 CFL2Q9Y281 166 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 LSM4Q9Y4Z0 139 aaKnown RBP5.12□□□□□ -1.59
SCLT1-207ENST00000506233 LRP12Q9Y561 859 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 CFAP46Q8IYW2 2715 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 IGKV1-27A0A075B6S5 117 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 A0A1W2PPK0 400 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 SMAD9O15198 467 aaKnown RBP5.12□□□□□ -1.59
SCLT1-207ENST00000506233 RCBTB2O95199 551 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 TTRP02766 147 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 LIPFP07098 398 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 OR8G3PP0DMU2 310 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 CRYGSP22914 178 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 RORCP51449 518 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 POLR2HP52434 150 aaKnown RBP5.12□□□□□ -1.59
SCLT1-207ENST00000506233 FOXG1P55316 489 aaPredicted RBP5.12□□□□□ -1.59
SCLT1-207ENST00000506233 CLDN20P56880 219 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 RPL27P61353 136 aaKnown RBP5.12□□□□□ -1.59
SCLT1-207ENST00000506233 DGCR2P98153 550 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 SNTA1Q13424 505 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 PAPD4Q6PIY7 484 aaKnown RBP5.12□□□□□ -1.59
SCLT1-207ENST00000506233 XKRXQ6PP77 449 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 GRINAQ7Z429 371 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 PRSS33Q8NF86 280 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 TMEM185AQ8NFB2 350 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 MFSD8Q8NHS3 518 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 M1APQ8TC57 530 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 SCMH1Q96GD3 660 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 ZNF385AQ96PM9 386 aaKnown RBP5.12□□□□□ -1.59
SCLT1-207ENST00000506233 DPCDQ9BVM2 203 aaPredicted RBP5.12□□□□□ -1.59
SCLT1-207ENST00000506233 ASCL3Q9NQ33 180 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 PLSCR3Q9NRY6 295 aa5.12□□□□□ -1.59
SCLT1-207ENST00000506233 GOLGA4Q13439 2230 aaKnown RBP5.12□□□□□ -1.59
SCLT1-207ENST00000506233 TRBV11-1A0A0K0K1C0 115 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 A0A1B0GWJ7 208 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 MFSD2BA6NFX1 497 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 ACOD1A6NK06 481 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 CHRM2P08172 466 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 C1QTNF9P0C862 333 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 NAGAP17050 411 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 SLC6A8P48029 635 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 GPR176Q14439 515 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 SLC17A1Q14916 467 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 SF3A2Q15428 464 aaKnown RBP5.11□□□□□ -1.59
SCLT1-207ENST00000506233 RSBN1Q5VWQ0 802 aaPredicted RBP5.11□□□□□ -1.59
SCLT1-207ENST00000506233 SLC36A1Q7Z2H8 476 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 ZNF554Q86TJ5 538 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 MYPOPQ86VE0 399 aaPredicted RBP5.11□□□□□ -1.59
SCLT1-207ENST00000506233 KLHL36Q8N4N3 616 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 OR2Y1Q8NGV0 311 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 NEIL3Q8TAT5 605 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 RNF133Q8WVZ7 376 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms