RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 TRBV4-1A0A0J9YWV2 114 aa17.44■□□□□ 0.38
SQSTM1-210ENST00000506042 GPR137BO60478 399 aa17.44■□□□□ 0.38
SQSTM1-210ENST00000506042 PTBP3O95758 552 aaKnown RBP17.44■□□□□ 0.38
SQSTM1-210ENST00000506042 GRPP07492 148 aa17.44■□□□□ 0.38
SQSTM1-210ENST00000506042 MUC1P15941 1255 aaPredicted RBP17.44■□□□□ 0.38
SQSTM1-210ENST00000506042 HIST1H1CP16403 213 aaKnown RBP17.44■□□□□ 0.38
SQSTM1-210ENST00000506042 CFL1P23528 166 aaKnown RBP17.44■□□□□ 0.38
SQSTM1-210ENST00000506042 RBMXP38159 391 aaKnown RBP17.44■□□□□ 0.38
SQSTM1-210ENST00000506042 SF3A3Q12874 501 aaKnown RBP eCLIP17.44■□□□□ 0.38
SQSTM1-210ENST00000506042 MPPED2Q15777 294 aa17.44■□□□□ 0.38
SQSTM1-210ENST00000506042 KRTAP27-1Q3LI81 207 aa17.44■□□□□ 0.38
SQSTM1-210ENST00000506042 DHRS7BQ6IAN0 325 aaPredicted RBP17.44■□□□□ 0.38
SQSTM1-210ENST00000506042 LDLRAD3Q86YD5 345 aa17.44■□□□□ 0.38
SQSTM1-210ENST00000506042 LINC00471Q8N535 108 aa17.44■□□□□ 0.38
SQSTM1-210ENST00000506042 CNTD2Q9H8S5 307 aa17.44■□□□□ 0.38
SQSTM1-210ENST00000506042 DCAF13Q9NV06 445 aaKnown RBP17.44■□□□□ 0.38
SQSTM1-210ENST00000506042 PDP1Q9P0J1 537 aaPredicted RBP17.44■□□□□ 0.38
SQSTM1-210ENST00000506042 DCTN6O00399 190 aa17.43■□□□□ 0.38
SQSTM1-210ENST00000506042 PAHP00439 452 aa17.43■□□□□ 0.38
SQSTM1-210ENST00000506042 NCK1P16333 377 aa17.43■□□□□ 0.38
SQSTM1-210ENST00000506042 FUT4P22083 530 aa17.43■□□□□ 0.38
SQSTM1-210ENST00000506042 BLVRAP53004 296 aa17.43■□□□□ 0.38
SQSTM1-210ENST00000506042 CDONQ4KMG0 1287 aa17.43■□□□□ 0.38
SQSTM1-210ENST00000506042 HSP90B2PQ58FF3 399 aa17.43■□□□□ 0.38
SQSTM1-210ENST00000506042 BTN2A1Q7KYR7 527 aa17.43■□□□□ 0.38
SQSTM1-210ENST00000506042 CPLX4Q7Z7G2 160 aa17.43■□□□□ 0.38
SQSTM1-210ENST00000506042 GALNT4Q8N4A0 578 aa17.43■□□□□ 0.38
SQSTM1-210ENST00000506042 FAM86B1Q8N7N1 296 aa17.43■□□□□ 0.38
SQSTM1-210ENST00000506042 C19orf18Q8NEA5 215 aa17.43■□□□□ 0.38
SQSTM1-210ENST00000506042 GNPDA2Q8TDQ7 276 aa17.43■□□□□ 0.38
SQSTM1-210ENST00000506042 ST8SIA4Q92187 359 aa17.43■□□□□ 0.38
SQSTM1-210ENST00000506042 RNPEPL1Q9HAU8 725 aa17.43■□□□□ 0.38
SQSTM1-210ENST00000506042 ADA2Q9NZK5 511 aa17.43■□□□□ 0.38
SQSTM1-210ENST00000506042 KAAG1Q9UBP8 84 aa17.43■□□□□ 0.38
SQSTM1-210ENST00000506042 SOX21Q9Y651 276 aaPredicted RBP17.43■□□□□ 0.38
SQSTM1-210ENST00000506042 SLC22A31A6NKX4 558 aa17.42■□□□□ 0.38
SQSTM1-210ENST00000506042 DVL1O14640 695 aa17.42■□□□□ 0.38
SQSTM1-210ENST00000506042 CLPXO76031 633 aa17.42■□□□□ 0.38
SQSTM1-210ENST00000506042 MMP9P14780 707 aa17.42■□□□□ 0.38
SQSTM1-210ENST00000506042 GNALP38405 381 aa17.42■□□□□ 0.38
SQSTM1-210ENST00000506042 ARF6P62330 175 aa17.42■□□□□ 0.38
SQSTM1-210ENST00000506042 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.42■□□□□ 0.38
SQSTM1-210ENST00000506042 SDR9C7Q8NEX9 313 aa17.42■□□□□ 0.38
SQSTM1-210ENST00000506042 DHRS1Q96LJ7 313 aa17.42■□□□□ 0.38
SQSTM1-210ENST00000506042 TBX15Q96SF7 602 aa17.42■□□□□ 0.38
SQSTM1-210ENST00000506042 RBM4BQ9BQ04 359 aaKnown RBP17.42■□□□□ 0.38
SQSTM1-210ENST00000506042 SIRPDQ9H106 197 aa17.42■□□□□ 0.38
SQSTM1-210ENST00000506042 ONECUT1Q9UBC0 465 aa17.42■□□□□ 0.38
SQSTM1-210ENST00000506042 MAGEL2Q9UJ55 1249 aa17.42■□□□□ 0.38
SQSTM1-210ENST00000506042 PKD1L1Q8TDX9 2849 aa17.41■□□□□ 0.38
SQSTM1-210ENST00000506042 NDUFB3O43676 98 aa17.41■□□□□ 0.38
SQSTM1-210ENST00000506042 GYPAP02724 150 aa17.41■□□□□ 0.38
SQSTM1-210ENST00000506042 FMO3P31513 532 aa17.41■□□□□ 0.38
SQSTM1-210ENST00000506042 TGFBR2P37173 567 aa17.41■□□□□ 0.38
SQSTM1-210ENST00000506042 IER3P46695 156 aa17.41■□□□□ 0.38
SQSTM1-210ENST00000506042 FXYD6P3P58550 94 aa17.41■□□□□ 0.38
SQSTM1-210ENST00000506042 GRB2P62993 217 aaKnown RBP17.41■□□□□ 0.38
SQSTM1-210ENST00000506042 BLMHQ13867 455 aa17.41■□□□□ 0.38
SQSTM1-210ENST00000506042 TIGD6Q17RP2 521 aa17.41■□□□□ 0.38
SQSTM1-210ENST00000506042 LRRC10Q5BKY1 277 aa17.41■□□□□ 0.38
SQSTM1-210ENST00000506042 OR5R1Q8NH85 324 aa17.41■□□□□ 0.38
SQSTM1-210ENST00000506042 LINC01006Q8NI28 216 aa17.41■□□□□ 0.38
SQSTM1-210ENST00000506042 PYURFQ96I23 114 aa17.41■□□□□ 0.38
SQSTM1-210ENST00000506042 ABCD2Q9UBJ2 740 aa17.41■□□□□ 0.38
SQSTM1-210ENST00000506042 CTSZQ9UBR2 303 aa17.41■□□□□ 0.38
SQSTM1-210ENST00000506042 RPUSD1Q9UJJ7 312 aaKnown RBP17.41■□□□□ 0.38
SQSTM1-210ENST00000506042 NKX6-3A6NJ46 265 aa17.4■□□□□ 0.38
SQSTM1-210ENST00000506042 ZNF878C9JN71 531 aa17.4■□□□□ 0.38
SQSTM1-210ENST00000506042 HSD11B1P28845 292 aa17.4■□□□□ 0.38
SQSTM1-210ENST00000506042 PSME3P61289 254 aa17.4■□□□□ 0.38
SQSTM1-210ENST00000506042 ZNF92Q03936 586 aa17.4■□□□□ 0.38
SQSTM1-210ENST00000506042 TSPAN31Q12999 210 aa17.4■□□□□ 0.38
SQSTM1-210ENST00000506042 SEC23BQ15437 767 aa17.4■□□□□ 0.38
SQSTM1-210ENST00000506042 RSPO1Q2MKA7 263 aaPredicted RBP17.4■□□□□ 0.38
SQSTM1-210ENST00000506042 METAP1DQ6UB28 335 aaPredicted RBP17.4■□□□□ 0.38
SQSTM1-210ENST00000506042 DPY19L4Q7Z388 723 aa17.4■□□□□ 0.38
SQSTM1-210ENST00000506042 LNX2Q8N448 690 aa17.4■□□□□ 0.38
SQSTM1-210ENST00000506042 TAF15Q92804 592 aaKnown RBP eCLIP17.4■□□□□ 0.38
SQSTM1-210ENST00000506042 C12orf43Q96C57 262 aaKnown RBP17.4■□□□□ 0.38
SQSTM1-210ENST00000506042 C7orf34Q96L11 122 aa17.4■□□□□ 0.38
SQSTM1-210ENST00000506042 KCNJ15Q99712 375 aa17.4■□□□□ 0.38
SQSTM1-210ENST00000506042 PKP2Q99959 881 aa17.4■□□□□ 0.38
SQSTM1-210ENST00000506042 TOR3AQ9H497 397 aa17.4■□□□□ 0.38
SQSTM1-210ENST00000506042 GORASP2Q9H8Y8 452 aa17.4■□□□□ 0.38
SQSTM1-210ENST00000506042 ABCB9Q9NP78 766 aa17.4■□□□□ 0.38
SQSTM1-210ENST00000506042 CD300AQ9UGN4 299 aa17.4■□□□□ 0.38
SQSTM1-210ENST00000506042 OR6C68A6NDL8 312 aa17.39■□□□□ 0.37
SQSTM1-210ENST00000506042 ANKRD61A6NGH8 418 aa17.39■□□□□ 0.37
SQSTM1-210ENST00000506042 ANXA2P2A6NMY6 339 aa17.39■□□□□ 0.37
SQSTM1-210ENST00000506042 IGHV4-59P01825 116 aa17.39■□□□□ 0.37
SQSTM1-210ENST00000506042 FABP3P05413 133 aa17.39■□□□□ 0.37
SQSTM1-210ENST00000506042 RRM2P31350 389 aa17.39■□□□□ 0.37
SQSTM1-210ENST00000506042 PRSS12P56730 875 aa17.39■□□□□ 0.37
SQSTM1-210ENST00000506042 RELBQ01201 579 aa17.39■□□□□ 0.37
SQSTM1-210ENST00000506042 TEX36Q5VZQ5 186 aa17.39■□□□□ 0.37
SQSTM1-210ENST00000506042 C11orf88Q6PI97 169 aa17.39■□□□□ 0.37
SQSTM1-210ENST00000506042 NAA40Q86UY6 237 aa17.39■□□□□ 0.37
SQSTM1-210ENST00000506042 ZDHHC21Q8IVQ6 265 aa17.39■□□□□ 0.37
SQSTM1-210ENST00000506042 OR56B2PQ8NGI1 322 aa17.39■□□□□ 0.37
SQSTM1-210ENST00000506042 PNRC2Q9NPJ4 139 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms